RNA–Protein interactions for RNA: ENST00000371142.8

TM9SF3-201, Transcript of transmembrane 9 superfamily member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF3, Length 6,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-201ENST00000371142 A0A1W2PR80 420 aa19.92■□□□□ 0.78
TM9SF3-201ENST00000371142 ABCD3P28288 659 aa19.92■□□□□ 0.78
TM9SF3-201ENST00000371142 SUMO3P55854 103 aaPredicted RBP19.92■□□□□ 0.78
TM9SF3-201ENST00000371142 ARHGDIGQ99819 225 aa19.92■□□□□ 0.78
TM9SF3-201ENST00000371142 ZNF251Q9BRH9 671 aa19.92■□□□□ 0.78
TM9SF3-201ENST00000371142 DBX1A6NMT0 343 aa19.91■□□□□ 0.78
TM9SF3-201ENST00000371142 THBS4P35443 961 aa19.91■□□□□ 0.78
TM9SF3-201ENST00000371142 FOXB2Q5VYV0 432 aa19.91■□□□□ 0.78
TM9SF3-201ENST00000371142 OR2Z1Q8NG97 314 aa19.91■□□□□ 0.78
TM9SF3-201ENST00000371142 SLC6A13Q9NSD5 602 aa19.91■□□□□ 0.78
TM9SF3-201ENST00000371142 SNRPGP15A8MWD9 76 aa19.91■□□□□ 0.78
TM9SF3-201ENST00000371142 ALX3O95076 343 aa19.91■□□□□ 0.78
TM9SF3-201ENST00000371142 UBE3DQ7Z6J8 389 aa19.91■□□□□ 0.78
TM9SF3-201ENST00000371142 GPR32P1Q8NGA4 272 aa19.91■□□□□ 0.78
TM9SF3-201ENST00000371142 OR1F12Q8NHA8 337 aa19.91■□□□□ 0.78
TM9SF3-201ENST00000371142 CMBLQ96DG6 245 aa19.91■□□□□ 0.78
TM9SF3-201ENST00000371142 WDR89Q96FK6 387 aaPredicted RBP19.91■□□□□ 0.78
TM9SF3-201ENST00000371142 MED30Q96HR3 178 aa19.91■□□□□ 0.78
TM9SF3-201ENST00000371142 CTDSP1Q9GZU7 261 aa19.91■□□□□ 0.78
TM9SF3-201ENST00000371142 ESRP2Q9H6T0 727 aaKnown RBP19.91■□□□□ 0.78
TM9SF3-201ENST00000371142 AQP6Q13520 282 aa19.91■□□□□ 0.78
TM9SF3-201ENST00000371142 LINC00303Q3SY05 128 aa19.91■□□□□ 0.78
TM9SF3-201ENST00000371142 LILRA5A6NI73 299 aa19.91■□□□□ 0.78
TM9SF3-201ENST00000371142 RRASP10301 218 aa19.91■□□□□ 0.78
TM9SF3-201ENST00000371142 AKR1C3P42330 323 aa19.91■□□□□ 0.78
TM9SF3-201ENST00000371142 NARFLQ9H6Q4 476 aa19.91■□□□□ 0.78
TM9SF3-201ENST00000371142 TRGV10A0A0A0MS01 117 aa19.9■□□□□ 0.78
TM9SF3-201ENST00000371142 CD37P11049 281 aa19.9■□□□□ 0.78
TM9SF3-201ENST00000371142 SPNP16150 400 aa19.9■□□□□ 0.78
TM9SF3-201ENST00000371142 SIGLECL1Q8N7X8 197 aa19.9■□□□□ 0.78
TM9SF3-201ENST00000371142 H3BMH7 237 aa19.9■□□□□ 0.78
TM9SF3-201ENST00000371142 RAB1AP62820 205 aa19.9■□□□□ 0.78
TM9SF3-201ENST00000371142 DND1Q8IYX4 353 aaKnown RBP19.9■□□□□ 0.78
TM9SF3-201ENST00000371142 EDARADDQ8WWZ3 215 aa19.9■□□□□ 0.78
TM9SF3-201ENST00000371142 APOBEC3DQ96AK3 386 aaPredicted RBP19.9■□□□□ 0.78
TM9SF3-201ENST00000371142 AKR1E2Q96JD6 320 aa19.9■□□□□ 0.78
TM9SF3-201ENST00000371142 ADAT1Q9BUB4 502 aaKnown RBP19.9■□□□□ 0.78
TM9SF3-201ENST00000371142 NCBP2LA6PVI3 153 aaKnown RBP19.9■□□□□ 0.78
TM9SF3-201ENST00000371142 FXYD1O00168 92 aa19.9■□□□□ 0.78
TM9SF3-201ENST00000371142 BAP18Q8IXM2 172 aa19.9■□□□□ 0.78
TM9SF3-201ENST00000371142 MAFAQ8NHW3 353 aaPredicted RBP19.9■□□□□ 0.78
TM9SF3-201ENST00000371142 OTOSQ8NHW6 89 aa19.9■□□□□ 0.78
TM9SF3-201ENST00000371142 ONECUT1Q9UBC0 465 aa19.9■□□□□ 0.78
TM9SF3-201ENST00000371142 TRGV5A0A0B4J1U4 118 aa19.9■□□□□ 0.78
TM9SF3-201ENST00000371142 RFPL4AA6NLU0 287 aa19.9■□□□□ 0.78
TM9SF3-201ENST00000371142 RFPL4AL1F8VTS6 287 aa19.9■□□□□ 0.78
TM9SF3-201ENST00000371142 ZBTB25P24278 435 aa19.9■□□□□ 0.78
TM9SF3-201ENST00000371142 GUSBP11Q6P575 273 aa19.9■□□□□ 0.78
TM9SF3-201ENST00000371142 SH2D5Q6ZV89 423 aa19.9■□□□□ 0.78
TM9SF3-201ENST00000371142 TRAV1-2A0A0B4J238 106 aa19.9■□□□□ 0.78
TM9SF3-201ENST00000371142 FABP9Q0Z7S8 132 aa19.9■□□□□ 0.78
TM9SF3-201ENST00000371142 TPBGQ13641 420 aa19.9■□□□□ 0.78
TM9SF3-201ENST00000371142 C17orf78Q8N4C9 275 aa19.9■□□□□ 0.78
TM9SF3-201ENST00000371142 ZNF485Q8NCK3 441 aa19.9■□□□□ 0.78
TM9SF3-201ENST00000371142 ZDHHC16Q969W1 377 aa19.9■□□□□ 0.78
TM9SF3-201ENST00000371142 PELI1Q96FA3 418 aa19.9■□□□□ 0.78
TM9SF3-201ENST00000371142 ZNF391Q9UJN7 358 aa19.9■□□□□ 0.78
TM9SF3-201ENST00000371142 FOXJ3Q9UPW0 622 aa19.9■□□□□ 0.78
TM9SF3-201ENST00000371142 SSC5DA1L4H1 1573 aa19.89■□□□□ 0.78
TM9SF3-201ENST00000371142 RAE1P78406 368 aaKnown RBP19.89■□□□□ 0.78
TM9SF3-201ENST00000371142 LHX8Q68G74 356 aa19.89■□□□□ 0.78
TM9SF3-201ENST00000371142 ARHGEF39Q8N4T4 335 aa19.89■□□□□ 0.78
TM9SF3-201ENST00000371142 EXTL1Q92935 676 aa19.89■□□□□ 0.78
TM9SF3-201ENST00000371142 PLCH1Q4KWH8 1693 aa19.89■□□□□ 0.77
TM9SF3-201ENST00000371142 ZNF117Q03924 483 aa19.89■□□□□ 0.77
TM9SF3-201ENST00000371142 GSG1Q2KHT4 349 aa19.89■□□□□ 0.77
TM9SF3-201ENST00000371142 TMEM229BQ8NBD8 167 aa19.89■□□□□ 0.77
TM9SF3-201ENST00000371142 ADGRL4Q9HBW9 690 aa19.89■□□□□ 0.77
TM9SF3-201ENST00000371142 PRDM7Q9NQW5 492 aa19.89■□□□□ 0.77
TM9SF3-201ENST00000371142 TAF1P21675 1872 aa19.89■□□□□ 0.77
TM9SF3-201ENST00000371142 GNG10P50151 68 aa19.89■□□□□ 0.77
TM9SF3-201ENST00000371142 RNF151Q2KHN1 245 aa19.89■□□□□ 0.77
TM9SF3-201ENST00000371142 GOLT1BQ9Y3E0 138 aa19.89■□□□□ 0.77
TM9SF3-201ENST00000371142 TRIM77I1YAP6 450 aa19.89■□□□□ 0.77
TM9SF3-201ENST00000371142 OR2J3O76001 311 aa19.89■□□□□ 0.77
TM9SF3-201ENST00000371142 CPN1P15169 458 aa19.89■□□□□ 0.77
TM9SF3-201ENST00000371142 RAB35Q15286 201 aa19.89■□□□□ 0.77
TM9SF3-201ENST00000371142 CABLES2Q9BTV7 478 aa19.89■□□□□ 0.77
TM9SF3-201ENST00000371142 GAR1Q9NY12 217 aaKnown RBP19.89■□□□□ 0.77
TM9SF3-201ENST00000371142 DDX60LQ5H9U9 1706 aaKnown RBP19.89■□□□□ 0.77
TM9SF3-201ENST00000371142 FMODQ06828 376 aa19.89■□□□□ 0.77
TM9SF3-201ENST00000371142 STUMQ69YW2 141 aa19.89■□□□□ 0.77
TM9SF3-201ENST00000371142 TIGD3Q6B0B8 471 aa19.89■□□□□ 0.77
TM9SF3-201ENST00000371142 MOB3AQ96BX8 217 aa19.89■□□□□ 0.77
TM9SF3-201ENST00000371142 CCDC187A0A096LP49 1063 aa19.88■□□□□ 0.77
TM9SF3-201ENST00000371142 XKRY2A2RUG3 117 aa19.88■□□□□ 0.77
TM9SF3-201ENST00000371142 MPGP29372 298 aa19.88■□□□□ 0.77
TM9SF3-201ENST00000371142 NCR3LG1Q68D85 454 aa19.88■□□□□ 0.77
TM9SF3-201ENST00000371142 LRRTM1Q86UE6 522 aa19.88■□□□□ 0.77
TM9SF3-201ENST00000371142 LRFN3Q9BTN0 628 aa19.88■□□□□ 0.77
TM9SF3-201ENST00000371142 SRRQ9GZT4 340 aa19.88■□□□□ 0.77
TM9SF3-201ENST00000371142 PKD1L3Q7Z443 1732 aa19.88■□□□□ 0.77
TM9SF3-201ENST00000371142 LAMA4Q16363 1823 aa19.88■□□□□ 0.77
TM9SF3-201ENST00000371142 KLK10O43240 276 aa19.88■□□□□ 0.77
TM9SF3-201ENST00000371142 HYAL3O43820 417 aaPredicted RBP19.88■□□□□ 0.77
TM9SF3-201ENST00000371142 NOVA1P51513 510 aaKnown RBP19.88■□□□□ 0.77
TM9SF3-201ENST00000371142 SSX7Q7RTT5 188 aa19.88■□□□□ 0.77
TM9SF3-201ENST00000371142 TP53I13Q8NBR0 393 aaPredicted RBP19.88■□□□□ 0.77
TM9SF3-201ENST00000371142 SLC24A4Q8NFF2 622 aa19.88■□□□□ 0.77
TM9SF3-201ENST00000371142 LURAP1Q96LR2 239 aa19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms