RNA–Protein interactions for RNA: ENST00000370544.9

LMO4-202, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 5,405 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-202ENST00000370544 HMGA2P52926 109 aa17.62■□□□□ 0.41
LMO4-202ENST00000370544 ABI3BPQ7Z7G0 1075 aa17.62■□□□□ 0.41
LMO4-202ENST00000370544 TAAR6Q96RI8 345 aa17.62■□□□□ 0.41
LMO4-202ENST00000370544 SARGQ9BW04 601 aa17.62■□□□□ 0.41
LMO4-202ENST00000370544 PLEKHA2Q9HB19 425 aa17.62■□□□□ 0.41
LMO4-202ENST00000370544 KPTNQ9Y664 436 aa17.62■□□□□ 0.41
LMO4-202ENST00000370544 HOXD11P31277 338 aaPredicted RBP17.62■□□□□ 0.41
LMO4-202ENST00000370544 PWWP2BQ6NUJ5 590 aa17.62■□□□□ 0.41
LMO4-202ENST00000370544 CDH26Q8IXH8 852 aa17.62■□□□□ 0.41
LMO4-202ENST00000370544 OR2I1PQ8NGU4 316 aa17.62■□□□□ 0.41
LMO4-202ENST00000370544 TXN2Q99757 166 aa17.62■□□□□ 0.41
LMO4-202ENST00000370544 ADGRL4Q9HBW9 690 aa17.62■□□□□ 0.41
LMO4-202ENST00000370544 R4GN57 208 aa17.62■□□□□ 0.41
LMO4-202ENST00000370544 ZNF724A8MTY0 619 aa17.61■□□□□ 0.41
LMO4-202ENST00000370544 SCGB1D1O95968 90 aa17.61■□□□□ 0.41
LMO4-202ENST00000370544 CLEC3BP05452 202 aa17.61■□□□□ 0.41
LMO4-202ENST00000370544 RPL11P62913 178 aaKnown RBP17.61■□□□□ 0.41
LMO4-202ENST00000370544 CD300LDQ6UXZ3 194 aa17.61■□□□□ 0.41
LMO4-202ENST00000370544 CCDC190Q86UF4 302 aa17.61■□□□□ 0.41
LMO4-202ENST00000370544 TMED6Q8WW62 240 aa17.61■□□□□ 0.41
LMO4-202ENST00000370544 SPSB1Q96BD6 273 aa17.61■□□□□ 0.41
LMO4-202ENST00000370544 PATZ1Q9HBE1 687 aaKnown RBP17.61■□□□□ 0.41
LMO4-202ENST00000370544 MED9Q9NWA0 146 aa17.61■□□□□ 0.41
LMO4-202ENST00000370544 NEU3Q9UQ49 428 aa17.61■□□□□ 0.41
LMO4-202ENST00000370544 ZNF75AQ96N20 296 aa17.61■□□□□ 0.41
LMO4-202ENST00000370544 DOK1Q99704 481 aa17.61■□□□□ 0.41
LMO4-202ENST00000370544 FN3KRPQ9HA64 309 aa17.61■□□□□ 0.41
LMO4-202ENST00000370544 OSGIN2Q9Y236 505 aa17.61■□□□□ 0.41
LMO4-202ENST00000370544 TOX3O15405 576 aaPredicted RBP17.61■□□□□ 0.41
LMO4-202ENST00000370544 MT-ND4LP03901 98 aa17.61■□□□□ 0.41
LMO4-202ENST00000370544 RPS16P62249 146 aaKnown RBP17.61■□□□□ 0.41
LMO4-202ENST00000370544 TIAL1Q01085 375 aaKnown RBP eCLIP17.61■□□□□ 0.41
LMO4-202ENST00000370544 DRAM2Q6UX65 266 aa17.61■□□□□ 0.41
LMO4-202ENST00000370544 SLC38A6Q8IZM9 456 aa17.61■□□□□ 0.41
LMO4-202ENST00000370544 CORO2AQ92828 525 aa17.61■□□□□ 0.41
LMO4-202ENST00000370544 CMTM3Q96MX0 182 aa17.61■□□□□ 0.41
LMO4-202ENST00000370544 PCBP3P57721 371 aaKnown RBP17.61■□□□□ 0.41
LMO4-202ENST00000370544 XAF1Q6GPH4 301 aa17.61■□□□□ 0.41
LMO4-202ENST00000370544 ST8SIA4Q92187 359 aa17.61■□□□□ 0.41
LMO4-202ENST00000370544 NRTNQ99748 197 aa17.61■□□□□ 0.41
LMO4-202ENST00000370544 ARID1BQ8NFD5 2236 aaPredicted RBP17.6■□□□□ 0.41
LMO4-202ENST00000370544 NUDT19A8MXV4 375 aa17.6■□□□□ 0.41
LMO4-202ENST00000370544 LINC00303Q3SY05 128 aa17.6■□□□□ 0.41
LMO4-202ENST00000370544 C16orf47Q6ZP98 133 aaPredicted RBP17.6■□□□□ 0.41
LMO4-202ENST00000370544 EDARADDQ8WWZ3 215 aa17.6■□□□□ 0.41
LMO4-202ENST00000370544 RNF150Q9ULK6 438 aa17.6■□□□□ 0.41
LMO4-202ENST00000370544 RER1O15258 196 aa17.6■□□□□ 0.41
LMO4-202ENST00000370544 PLPP2O43688 288 aa17.6■□□□□ 0.41
LMO4-202ENST00000370544 FGF9P31371 208 aaPredicted RBP17.6■□□□□ 0.41
LMO4-202ENST00000370544 DBPQ10586 325 aaPredicted RBP17.6■□□□□ 0.41
LMO4-202ENST00000370544 TMEM41BQ5BJD5 291 aa17.6■□□□□ 0.41
LMO4-202ENST00000370544 RHBDD2Q6NTF9 364 aa17.6■□□□□ 0.41
LMO4-202ENST00000370544 OR52B4Q8NGK2 314 aa17.6■□□□□ 0.41
LMO4-202ENST00000370544 MCHR2Q969V1 340 aa17.6■□□□□ 0.41
LMO4-202ENST00000370544 GALMQ96C23 342 aa17.6■□□□□ 0.41
LMO4-202ENST00000370544 ADAT1Q9BUB4 502 aaKnown RBP17.6■□□□□ 0.41
LMO4-202ENST00000370544 PELI1Q96FA3 418 aa17.6■□□□□ 0.41
LMO4-202ENST00000370544 C20orf24Q9BUV8 137 aa17.6■□□□□ 0.41
LMO4-202ENST00000370544 C12orf10Q9HB07 376 aa17.6■□□□□ 0.41
LMO4-202ENST00000370544 ZFP64Q9NPA5 681 aa17.6■□□□□ 0.41
LMO4-202ENST00000370544 CLEC1BQ9P126 229 aa17.6■□□□□ 0.41
LMO4-202ENST00000370544 STRAPQ9Y3F4 350 aaKnown RBP17.6■□□□□ 0.41
LMO4-202ENST00000370544 COL5A3P25940 1745 aaPredicted RBP17.6■□□□□ 0.41
LMO4-202ENST00000370544 EPPINO95925 133 aa17.6■□□□□ 0.41
LMO4-202ENST00000370544 NLRC3Q7RTR2 1065 aa17.6■□□□□ 0.41
LMO4-202ENST00000370544 EXTL1Q92935 676 aa17.6■□□□□ 0.41
LMO4-202ENST00000370544 COMMD5Q9GZQ3 224 aa17.6■□□□□ 0.41
LMO4-202ENST00000370544 SLC25A32Q9H2D1 315 aa17.6■□□□□ 0.41
LMO4-202ENST00000370544 P2RX3P56373 397 aa17.59■□□□□ 0.41
LMO4-202ENST00000370544 ADPRHL1Q8NDY3 354 aa17.59■□□□□ 0.41
LMO4-202ENST00000370544 IGHA2P01877 340 aa17.59■□□□□ 0.41
LMO4-202ENST00000370544 UBE2G1P62253 170 aa17.59■□□□□ 0.41
LMO4-202ENST00000370544 H3F3CQ6NXT2 135 aa17.59■□□□□ 0.41
LMO4-202ENST00000370544 SMOC1Q9H4F8 434 aa17.59■□□□□ 0.41
LMO4-202ENST00000370544 FSCN3Q9NQT6 498 aa17.59■□□□□ 0.41
LMO4-202ENST00000370544 CYSLTR2Q9NS75 346 aa17.59■□□□□ 0.41
LMO4-202ENST00000370544 PSENENQ9NZ42 101 aa17.59■□□□□ 0.41
LMO4-202ENST00000370544 COL4A1P02462 1669 aa17.59■□□□□ 0.41
LMO4-202ENST00000370544 SPRY3O43610 288 aa17.59■□□□□ 0.41
LMO4-202ENST00000370544 GNB2P62879 340 aa17.59■□□□□ 0.41
LMO4-202ENST00000370544 OR4S1Q8NGB4 309 aa17.59■□□□□ 0.41
LMO4-202ENST00000370544 FAM117AQ9C073 453 aa17.59■□□□□ 0.41
LMO4-202ENST00000370544 ZFP62Q8NB50 900 aaPredicted RBP17.59■□□□□ 0.41
LMO4-202ENST00000370544 FBXW5Q969U6 566 aa17.59■□□□□ 0.41
LMO4-202ENST00000370544 C4orf45Q96LM5 186 aa17.59■□□□□ 0.41
LMO4-202ENST00000370544 CIB3Q96Q77 187 aaPredicted RBP17.59■□□□□ 0.41
LMO4-202ENST00000370544 PLPP3O14495 311 aa17.58■□□□□ 0.41
LMO4-202ENST00000370544 FUT3P21217 361 aa17.58■□□□□ 0.41
LMO4-202ENST00000370544 CRYBB2P43320 205 aa17.58■□□□□ 0.41
LMO4-202ENST00000370544 TFF2Q03403 129 aa17.58■□□□□ 0.41
LMO4-202ENST00000370544 SRSF5Q13243 272 aaKnown RBP17.58■□□□□ 0.41
LMO4-202ENST00000370544 OR2W3Q7Z3T1 314 aa17.58■□□□□ 0.41
LMO4-202ENST00000370544 FBXL14Q8N1E6 418 aa17.58■□□□□ 0.41
LMO4-202ENST00000370544 OR10D3Q8NH80 312 aa17.58■□□□□ 0.41
LMO4-202ENST00000370544 ZNF764Q96H86 408 aaPredicted RBP17.58■□□□□ 0.41
LMO4-202ENST00000370544 DTYMKP23919 212 aa17.58■□□□□ 0.41
LMO4-202ENST00000370544 CDKN2AP42771 156 aaKnown RBP17.58■□□□□ 0.41
LMO4-202ENST00000370544 ERHP84090 104 aaKnown RBP17.58■□□□□ 0.41
LMO4-202ENST00000370544 FLI1Q01543 452 aaPredicted RBP17.58■□□□□ 0.41
LMO4-202ENST00000370544 CBLN3Q6UW01 205 aa17.58■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms