RNA–Protein interactions for RNA: ENST00000370496.3

COL9A1-204, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 1,372 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-204ENST00000370496 SPERTQ8NA61 448 aa12.56□□□□□ -0.4
COL9A1-204ENST00000370496 PELI1Q96FA3 418 aa12.56□□□□□ -0.4
COL9A1-204ENST00000370496 TMEM80Q96HE8 168 aa12.56□□□□□ -0.4
COL9A1-204ENST00000370496 JAM3Q9BX67 310 aa12.56□□□□□ -0.4
COL9A1-204ENST00000370496 NARFLQ9H6Q4 476 aa12.56□□□□□ -0.4
COL9A1-204ENST00000370496 ABCB9Q9NP78 766 aa12.56□□□□□ -0.4
COL9A1-204ENST00000370496 TMEM106BQ9NUM4 274 aa12.56□□□□□ -0.4
COL9A1-204ENST00000370496 CHCHD3Q9NX63 227 aaKnown RBP12.56□□□□□ -0.4
COL9A1-204ENST00000370496 CNOT2Q9NZN8 540 aaKnown RBP12.56□□□□□ -0.4
COL9A1-204ENST00000370496 DIMT1Q9UNQ2 313 aaKnown RBP12.56□□□□□ -0.4
COL9A1-204ENST00000370496 EXOSC1Q9Y3B2 195 aaKnown RBP12.56□□□□□ -0.4
COL9A1-204ENST00000370496 RHBDD3Q9Y3P4 386 aa12.56□□□□□ -0.4
COL9A1-204ENST00000370496 DYSFO75923 2080 aa12.55□□□□□ -0.4
COL9A1-204ENST00000370496 LOC107986453A0A1B0GWG9 222 aa12.55□□□□□ -0.4
COL9A1-204ENST00000370496 ISPDA4D126 451 aa12.55□□□□□ -0.4
COL9A1-204ENST00000370496 LRRC30A6NM36 301 aa12.55□□□□□ -0.4
COL9A1-204ENST00000370496 SYT7O43581 403 aa12.55□□□□□ -0.4
COL9A1-204ENST00000370496 IGLV3-1P01715 115 aa12.55□□□□□ -0.4
COL9A1-204ENST00000370496 FAHP16930 419 aa12.55□□□□□ -0.4
COL9A1-204ENST00000370496 MYF6P23409 242 aa12.55□□□□□ -0.4
COL9A1-204ENST00000370496 CHN2P52757 468 aa12.55□□□□□ -0.4
COL9A1-204ENST00000370496 TMEM33P57088 247 aa12.55□□□□□ -0.4
COL9A1-204ENST00000370496 RIPPLY1Q0D2K3 151 aa12.55□□□□□ -0.4
COL9A1-204ENST00000370496 MRPL28Q13084 256 aaKnown RBP12.55□□□□□ -0.4
COL9A1-204ENST00000370496 PRDX4Q13162 271 aa12.55□□□□□ -0.4
COL9A1-204ENST00000370496 AVPI1Q5T686 147 aa12.55□□□□□ -0.4
COL9A1-204ENST00000370496 PRAMEF6Q5VXH4 476 aa12.55□□□□□ -0.4
COL9A1-204ENST00000370496 TMPRSS11AQ6ZMR5 421 aa12.55□□□□□ -0.4
COL9A1-204ENST00000370496 DOK3Q7L591 496 aa12.55□□□□□ -0.4
COL9A1-204ENST00000370496 ZDHHC23Q8IYP9 409 aa12.55□□□□□ -0.4
COL9A1-204ENST00000370496 PRSS35Q8N3Z0 413 aa12.55□□□□□ -0.4
COL9A1-204ENST00000370496 STX19Q8N4C7 294 aa12.55□□□□□ -0.4
COL9A1-204ENST00000370496 KLHL36Q8N4N3 616 aa12.55□□□□□ -0.4
COL9A1-204ENST00000370496 OR2G2Q8NGZ5 317 aa12.55□□□□□ -0.4
COL9A1-204ENST00000370496 PIGCQ92535 297 aa12.55□□□□□ -0.4
COL9A1-204ENST00000370496 CNBD2Q96M20 576 aa12.55□□□□□ -0.4
COL9A1-204ENST00000370496 RTL8AQ9BWD3 113 aa12.55□□□□□ -0.4
COL9A1-204ENST00000370496 ISG20L2Q9H9L3 353 aaKnown RBP12.55□□□□□ -0.4
COL9A1-204ENST00000370496 GCM1Q9NP62 436 aa12.55□□□□□ -0.4
COL9A1-204ENST00000370496 C14orf119Q9NWQ9 140 aa12.55□□□□□ -0.4
COL9A1-204ENST00000370496 ENPP5Q9UJA9 477 aa12.55□□□□□ -0.4
COL9A1-204ENST00000370496 PIGLQ9Y2B2 252 aa12.55□□□□□ -0.4
COL9A1-204ENST00000370496 MPC1Q9Y5U8 109 aa12.55□□□□□ -0.4
COL9A1-204ENST00000370496 MED13LQ71F56 2210 aa12.54□□□□□ -0.4
COL9A1-204ENST00000370496 A0A096LNT2 108 aa12.54□□□□□ -0.4
COL9A1-204ENST00000370496 IGHV4-61A0A0C4DH41 118 aa12.54□□□□□ -0.4
COL9A1-204ENST00000370496 A6NLC8 198 aa12.54□□□□□ -0.4
COL9A1-204ENST00000370496 ZNF850A8MQ14 1090 aa12.54□□□□□ -0.4
COL9A1-204ENST00000370496 H3BSH0 61 aa12.54□□□□□ -0.4
COL9A1-204ENST00000370496 IFNL4K9M1U5 179 aa12.54□□□□□ -0.4
COL9A1-204ENST00000370496 SLC1A7O00341 560 aa12.54□□□□□ -0.4
COL9A1-204ENST00000370496 LIMS3P0CW19 117 aa12.54□□□□□ -0.4
COL9A1-204ENST00000370496 LIMS4P0CW20 117 aa12.54□□□□□ -0.4
COL9A1-204ENST00000370496 IRF2P14316 349 aa12.54□□□□□ -0.4
COL9A1-204ENST00000370496 KIR3DL2P43630 455 aa12.54□□□□□ -0.4
COL9A1-204ENST00000370496 ETV1P50549 477 aa12.54□□□□□ -0.4
COL9A1-204ENST00000370496 GBX2P52951 348 aaPredicted RBP12.54□□□□□ -0.4
COL9A1-204ENST00000370496 MVKQ03426 396 aa12.54□□□□□ -0.4
COL9A1-204ENST00000370496 LOXL1Q08397 574 aaPredicted RBP12.54□□□□□ -0.4
COL9A1-204ENST00000370496 ST3GAL4Q11206 333 aa12.54□□□□□ -0.4
COL9A1-204ENST00000370496 HNRNPA0Q13151 305 aaKnown RBP12.54□□□□□ -0.4
COL9A1-204ENST00000370496 ZBTB37Q5TC79 503 aa12.54□□□□□ -0.4
COL9A1-204ENST00000370496 LAIR2Q6ISS4 152 aa12.54□□□□□ -0.4
COL9A1-204ENST00000370496 BIVMQ86UB2 503 aa12.54□□□□□ -0.4
COL9A1-204ENST00000370496 OR11L1Q8NGX0 322 aa12.54□□□□□ -0.4
COL9A1-204ENST00000370496 ZNF420Q8TAQ5 688 aaPredicted RBP12.54□□□□□ -0.4
COL9A1-204ENST00000370496 HAVCR2Q8TDQ0 301 aa12.54□□□□□ -0.4
COL9A1-204ENST00000370496 GGHQ92820 318 aa12.54□□□□□ -0.4
COL9A1-204ENST00000370496 HPS1Q92902 700 aa12.54□□□□□ -0.4
COL9A1-204ENST00000370496 RAB1CQ92928 201 aa12.54□□□□□ -0.4
COL9A1-204ENST00000370496 ITFG2Q969R8 447 aa12.54□□□□□ -0.4
COL9A1-204ENST00000370496 ZNF184Q99676 751 aaPredicted RBP12.54□□□□□ -0.4
COL9A1-204ENST00000370496 MICU1Q9BPX6 476 aa12.54□□□□□ -0.4
COL9A1-204ENST00000370496 FN3KRPQ9HA64 309 aa12.54□□□□□ -0.4
COL9A1-204ENST00000370496 PLCXD1Q9NUJ7 323 aa12.54□□□□□ -0.4
COL9A1-204ENST00000370496 UFSP2Q9NUQ7 469 aa12.54□□□□□ -0.4
COL9A1-204ENST00000370496 SCN3BQ9NY72 215 aa12.54□□□□□ -0.4
COL9A1-204ENST00000370496 PSORS1C1Q9UIG5 152 aa12.54□□□□□ -0.4
COL9A1-204ENST00000370496 RAB26Q9ULW5 256 aa12.54□□□□□ -0.4
COL9A1-204ENST00000370496 CST4P01036 141 aa12.53□□□□□ -0.4
COL9A1-204ENST00000370496 CCL1P22362 96 aa12.53□□□□□ -0.4
COL9A1-204ENST00000370496 GATA4P43694 442 aa12.53□□□□□ -0.4
COL9A1-204ENST00000370496 NANOS3P60323 173 aaKnown RBP12.53□□□□□ -0.4
COL9A1-204ENST00000370496 MAB21L1Q13394 359 aa12.53□□□□□ -0.4
COL9A1-204ENST00000370496 C6orf141Q5SZD1 244 aa12.53□□□□□ -0.4
COL9A1-204ENST00000370496 PLCXD3Q63HM9 321 aa12.53□□□□□ -0.4
COL9A1-204ENST00000370496 FDX2Q6P4F2 183 aa12.53□□□□□ -0.4
COL9A1-204ENST00000370496 KCTD8Q6ZWB6 473 aa12.53□□□□□ -0.4
COL9A1-204ENST00000370496 ZNF676Q8N7Q3 588 aa12.53□□□□□ -0.4
COL9A1-204ENST00000370496 ITPKCQ96DU7 683 aa12.53□□□□□ -0.4
COL9A1-204ENST00000370496 HIST1H2AAQ96QV6 131 aa12.53□□□□□ -0.4
COL9A1-204ENST00000370496 ZNF649Q9BS31 505 aa12.53□□□□□ -0.4
COL9A1-204ENST00000370496 Q9H521 79 aa12.53□□□□□ -0.4
COL9A1-204ENST00000370496 DCAF16Q9NXF7 216 aa12.53□□□□□ -0.4
COL9A1-204ENST00000370496 CAB39Q9Y376 341 aaPredicted RBP12.53□□□□□ -0.4
COL9A1-204ENST00000370496 WIPI2Q9Y4P8 454 aa12.53□□□□□ -0.4
COL9A1-204ENST00000370496 V9GYS6 101 aa12.53□□□□□ -0.4
COL9A1-204ENST00000370496 A0A1B0GTI1 187 aa12.52□□□□□ -0.41
COL9A1-204ENST00000370496 hCG_1807616A0A1W2PRN6 198 aa12.52□□□□□ -0.41
COL9A1-204ENST00000370496 LRP5LA4QPB2 252 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms