RNA–Protein interactions for RNA: ENST00000368662.9

TUBE1-202, Transcript of tubulin epsilon 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBE1, Length 2,142 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-202ENST00000368662 ABCD4O14678 606 aa10.58□□□□□ -0.72
TUBE1-202ENST00000368662 NKX6-1P78426 367 aaPredicted RBP10.58□□□□□ -0.72
TUBE1-202ENST00000368662 CNN3Q15417 329 aaKnown RBP10.58□□□□□ -0.72
TUBE1-202ENST00000368662 ZNF404Q494X3 552 aa10.58□□□□□ -0.72
TUBE1-202ENST00000368662 BEX5Q5H9J7 111 aa10.58□□□□□ -0.72
TUBE1-202ENST00000368662 CDH26Q8IXH8 852 aa10.58□□□□□ -0.72
TUBE1-202ENST00000368662 LINC01560Q8TB33 94 aa10.58□□□□□ -0.72
TUBE1-202ENST00000368662 KCTD12Q96CX2 325 aaKnown RBP10.58□□□□□ -0.72
TUBE1-202ENST00000368662 HAVCR1Q96D42 359 aa10.58□□□□□ -0.72
TUBE1-202ENST00000368662 CMBLQ96DG6 245 aa10.58□□□□□ -0.72
TUBE1-202ENST00000368662 CPNE2Q96FN4 548 aaPredicted RBP10.58□□□□□ -0.72
TUBE1-202ENST00000368662 MMP27Q9H306 513 aa10.58□□□□□ -0.72
TUBE1-202ENST00000368662 HEATR1Q9H583 2144 aaKnown RBP10.58□□□□□ -0.72
TUBE1-202ENST00000368662 MRPL15Q9P015 296 aaKnown RBP10.58□□□□□ -0.72
TUBE1-202ENST00000368662 DOPEY1Q5JWR5 2465 aa10.58□□□□□ -0.72
TUBE1-202ENST00000368662 FLNCQ14315 2725 aa10.58□□□□□ -0.72
TUBE1-202ENST00000368662 ANKRD30BLA7E2S9 258 aa10.58□□□□□ -0.72
TUBE1-202ENST00000368662 ATP6V1G2-DDX39BF2Z307 99 aa10.58□□□□□ -0.72
TUBE1-202ENST00000368662 AIPO00170 330 aa10.58□□□□□ -0.72
TUBE1-202ENST00000368662 CST4P01036 141 aa10.58□□□□□ -0.72
TUBE1-202ENST00000368662 NRASP01111 189 aa10.58□□□□□ -0.72
TUBE1-202ENST00000368662 ALDOBP05062 364 aa10.58□□□□□ -0.72
TUBE1-202ENST00000368662 ERVS71-1P61550 626 aa10.58□□□□□ -0.72
TUBE1-202ENST00000368662 NCMAPQ5T1S8 102 aa10.58□□□□□ -0.72
TUBE1-202ENST00000368662 SLC22A25Q6T423 547 aa10.58□□□□□ -0.72
TUBE1-202ENST00000368662 SPSB1Q96BD6 273 aa10.58□□□□□ -0.72
TUBE1-202ENST00000368662 MRI1Q9BV20 369 aa10.58□□□□□ -0.72
TUBE1-202ENST00000368662 ABCB9Q9NP78 766 aa10.58□□□□□ -0.72
TUBE1-202ENST00000368662 CADP27708 2225 aa10.58□□□□□ -0.72
TUBE1-202ENST00000368662 A0A075B6Q4 140 aa10.57□□□□□ -0.72
TUBE1-202ENST00000368662 A0A0G2JK05 382 aa10.57□□□□□ -0.72
TUBE1-202ENST00000368662 IQCF6A8MYZ5 107 aa10.57□□□□□ -0.72
TUBE1-202ENST00000368662 GMDSO60547 372 aa10.57□□□□□ -0.72
TUBE1-202ENST00000368662 CLPXO76031 633 aa10.57□□□□□ -0.72
TUBE1-202ENST00000368662 NCR1O76036 304 aa10.57□□□□□ -0.72
TUBE1-202ENST00000368662 ADRA2CP18825 462 aa10.57□□□□□ -0.72
TUBE1-202ENST00000368662 PRKACBP22694 351 aa10.57□□□□□ -0.72
TUBE1-202ENST00000368662 CFPP27918 469 aa10.57□□□□□ -0.72
TUBE1-202ENST00000368662 OR10A3P58181 314 aa10.57□□□□□ -0.72
TUBE1-202ENST00000368662 SPOCK1Q08629 439 aa10.57□□□□□ -0.72
TUBE1-202ENST00000368662 OR2T2Q6IF00 324 aa10.57□□□□□ -0.72
TUBE1-202ENST00000368662 NR2C2APQ86WQ0 139 aa10.57□□□□□ -0.72
TUBE1-202ENST00000368662 MCFD2Q8NI22 146 aa10.57□□□□□ -0.72
TUBE1-202ENST00000368662 ACOT12Q8WYK0 555 aa10.57□□□□□ -0.72
TUBE1-202ENST00000368662 PAPOLGQ9BWT3 736 aaKnown RBP10.57□□□□□ -0.72
TUBE1-202ENST00000368662 BARHL1Q9BZE3 327 aa10.57□□□□□ -0.72
TUBE1-202ENST00000368662 NXF2Q9GZY0 626 aaKnown RBP10.57□□□□□ -0.72
TUBE1-202ENST00000368662 NPDC1Q9NQX5 325 aaPredicted RBP10.57□□□□□ -0.72
TUBE1-202ENST00000368662 PLEKHB1Q9UF11 243 aaPredicted RBP10.57□□□□□ -0.72
TUBE1-202ENST00000368662 SLC7A11Q9UPY5 501 aa10.57□□□□□ -0.72
TUBE1-202ENST00000368662 MPC1Q9Y5U8 109 aa10.57□□□□□ -0.72
TUBE1-202ENST00000368662 SMIM30A4D0T7 59 aa10.57□□□□□ -0.72
TUBE1-202ENST00000368662 WIPF3A6NGB9 483 aa10.57□□□□□ -0.72
TUBE1-202ENST00000368662 IFITM5A6NNB3 132 aa10.57□□□□□ -0.72
TUBE1-202ENST00000368662 VSTM5A8MXK1 200 aa10.57□□□□□ -0.72
TUBE1-202ENST00000368662 CD3EP07766 207 aa10.57□□□□□ -0.72
TUBE1-202ENST00000368662 ZNF250P15622 560 aa10.57□□□□□ -0.72
TUBE1-202ENST00000368662 ATF1P18846 271 aa10.57□□□□□ -0.72
TUBE1-202ENST00000368662 KITLGP21583 273 aa10.57□□□□□ -0.72
TUBE1-202ENST00000368662 CAV3P56539 151 aa10.57□□□□□ -0.72
TUBE1-202ENST00000368662 SELENOVP59797 346 aa10.57□□□□□ -0.72
TUBE1-202ENST00000368662 PSG7Q13046 419 aa10.57□□□□□ -0.72
TUBE1-202ENST00000368662 DYNC1I2Q13409 638 aaKnown RBP10.57□□□□□ -0.72
TUBE1-202ENST00000368662 DDI2Q5TDH0 399 aa10.57□□□□□ -0.72
TUBE1-202ENST00000368662 LINC00299Q6ZSB3 139 aa10.57□□□□□ -0.72
TUBE1-202ENST00000368662 OR51A2Q8NGJ7 313 aa10.57□□□□□ -0.72
TUBE1-202ENST00000368662 SYNPRQ8TBG9 265 aa10.57□□□□□ -0.72
TUBE1-202ENST00000368662 UBASH3BQ8TF42 649 aa10.57□□□□□ -0.72
TUBE1-202ENST00000368662 PIGCQ92535 297 aa10.57□□□□□ -0.72
TUBE1-202ENST00000368662 PLPPR2Q96GM1 343 aa10.57□□□□□ -0.72
TUBE1-202ENST00000368662 SLC30A2Q9BRI3 323 aa10.57□□□□□ -0.72
TUBE1-202ENST00000368662 UQCC2Q9BRT2 126 aa10.57□□□□□ -0.72
TUBE1-202ENST00000368662 SLC22A4Q9H015 551 aa10.57□□□□□ -0.72
TUBE1-202ENST00000368662 METTL17Q9H7H0 456 aaPredicted RBP10.57□□□□□ -0.72
TUBE1-202ENST00000368662 DAPK2Q9UIK4 370 aa10.57□□□□□ -0.72
TUBE1-202ENST00000368662 RHBDD3Q9Y3P4 386 aa10.57□□□□□ -0.72
TUBE1-202ENST00000368662 UBR5O95071 2799 aaPredicted RBP10.56□□□□□ -0.72
TUBE1-202ENST00000368662 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.56□□□□□ -0.72
TUBE1-202ENST00000368662 HCKP08631 526 aa10.56□□□□□ -0.72
TUBE1-202ENST00000368662 CD37P11049 281 aa10.56□□□□□ -0.72
TUBE1-202ENST00000368662 PRF1P14222 555 aa10.56□□□□□ -0.72
TUBE1-202ENST00000368662 AZGP1P25311 298 aaKnown RBP10.56□□□□□ -0.72
TUBE1-202ENST00000368662 KIR2DL3P43628 341 aa10.56□□□□□ -0.72
TUBE1-202ENST00000368662 CAPZA1P52907 286 aa10.56□□□□□ -0.72
TUBE1-202ENST00000368662 PRSS12P56730 875 aa10.56□□□□□ -0.72
TUBE1-202ENST00000368662 SNTB1Q13884 538 aaKnown RBP10.56□□□□□ -0.72
TUBE1-202ENST00000368662 UBE2V2Q15819 145 aa10.56□□□□□ -0.72
TUBE1-202ENST00000368662 IDNKQ5T6J7 187 aa10.56□□□□□ -0.72
TUBE1-202ENST00000368662 MZT2AQ6P582 158 aa10.56□□□□□ -0.72
TUBE1-202ENST00000368662 ZDHHC23Q8IYP9 409 aa10.56□□□□□ -0.72
TUBE1-202ENST00000368662 DNAAF1Q8NEP3 725 aa10.56□□□□□ -0.72
TUBE1-202ENST00000368662 SORCS2Q96PQ0 1159 aa10.56□□□□□ -0.72
TUBE1-202ENST00000368662 HIST1H2AAQ96QV6 131 aa10.56□□□□□ -0.72
TUBE1-202ENST00000368662 GFI1Q99684 422 aa10.56□□□□□ -0.72
TUBE1-202ENST00000368662 C6orf62Q9GZU0 229 aaPredicted RBP10.56□□□□□ -0.72
TUBE1-202ENST00000368662 ZNF442Q9H7R0 627 aa10.56□□□□□ -0.72
TUBE1-202ENST00000368662 PLGRKTQ9HBL7 147 aa10.56□□□□□ -0.72
TUBE1-202ENST00000368662 PURGQ9UJV8 347 aaKnown RBP10.56□□□□□ -0.72
TUBE1-202ENST00000368662 POU2F3Q9UKI9 436 aa10.56□□□□□ -0.72
TUBE1-202ENST00000368662 CMAHPQ9Y471 501 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms