RNA–Protein interactions for RNA: ENST00000367196.3

CTSD-202, Transcript of cathepsin D, humanhuman

TSL 5

Gene CTSD, Length 907 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-202ENST00000367196 CAB39Q9Y376 341 aaPredicted RBP12.29□□□□□ -0.44
CTSD-202ENST00000367196 KPTNQ9Y664 436 aa12.29□□□□□ -0.44
CTSD-202ENST00000367196 IGHV1-69DA0A0B4J2H0 117 aa12.28□□□□□ -0.44
CTSD-202ENST00000367196 CENPVL3A0A0U1RRI6 287 aa12.28□□□□□ -0.44
CTSD-202ENST00000367196 A0A1B0GVI7 797 aa12.28□□□□□ -0.44
CTSD-202ENST00000367196 FAM181BA6NEQ2 426 aa12.28□□□□□ -0.44
CTSD-202ENST00000367196 CST1P01037 141 aa12.28□□□□□ -0.44
CTSD-202ENST00000367196 IGHV1-69P01742 117 aa12.28□□□□□ -0.44
CTSD-202ENST00000367196 MELTFP08582 738 aa12.28□□□□□ -0.44
CTSD-202ENST00000367196 ANOS1P23352 680 aa12.28□□□□□ -0.44
CTSD-202ENST00000367196 OPRL1P41146 370 aa12.28□□□□□ -0.44
CTSD-202ENST00000367196 GSK3AP49840 483 aa12.28□□□□□ -0.44
CTSD-202ENST00000367196 RAG2P55895 527 aa12.28□□□□□ -0.44
CTSD-202ENST00000367196 ZNF121P58317 390 aaPredicted RBP12.28□□□□□ -0.44
CTSD-202ENST00000367196 PPP1R8Q12972 351 aaKnown RBP12.28□□□□□ -0.44
CTSD-202ENST00000367196 GFOD2Q3B7J2 385 aa12.28□□□□□ -0.44
CTSD-202ENST00000367196 FIP1L1Q6UN15 594 aaKnown RBP12.28□□□□□ -0.44
CTSD-202ENST00000367196 TREML4Q6UXN2 200 aa12.28□□□□□ -0.44
CTSD-202ENST00000367196 SGK3Q96BR1 496 aa12.28□□□□□ -0.44
CTSD-202ENST00000367196 PGAM5Q96HS1 289 aa12.28□□□□□ -0.44
CTSD-202ENST00000367196 RTL8AQ9BWD3 113 aa12.28□□□□□ -0.44
CTSD-202ENST00000367196 DNAJC27Q9NZQ0 273 aa12.28□□□□□ -0.44
CTSD-202ENST00000367196 MPC1Q9Y5U8 109 aa12.28□□□□□ -0.44
CTSD-202ENST00000367196 SOX21Q9Y651 276 aaPredicted RBP12.28□□□□□ -0.44
CTSD-202ENST00000367196 C5orf63A6NC05 138 aa12.27□□□□□ -0.45
CTSD-202ENST00000367196 NKX6-3A6NJ46 265 aa12.27□□□□□ -0.45
CTSD-202ENST00000367196 FAM183AA6NL82 134 aa12.27□□□□□ -0.45
CTSD-202ENST00000367196 TMEM210A6NLX4 147 aa12.27□□□□□ -0.45
CTSD-202ENST00000367196 PRR23D1E9PI22 279 aaPredicted RBP12.27□□□□□ -0.45
CTSD-202ENST00000367196 GNGT2O14610 69 aa12.27□□□□□ -0.45
CTSD-202ENST00000367196 PRODHO43272 600 aa12.27□□□□□ -0.45
CTSD-202ENST00000367196 WIPF1O43516 503 aa12.27□□□□□ -0.45
CTSD-202ENST00000367196 NDUFA7O95182 113 aa12.27□□□□□ -0.45
CTSD-202ENST00000367196 HMGN1P05114 100 aa12.27□□□□□ -0.45
CTSD-202ENST00000367196 LYNP07948 512 aa12.27□□□□□ -0.45
CTSD-202ENST00000367196 PRR23D2P0DMB1 279 aaPredicted RBP12.27□□□□□ -0.45
CTSD-202ENST00000367196 CDONQ4KMG0 1287 aa12.27□□□□□ -0.45
CTSD-202ENST00000367196 LRRC10Q5BKY1 277 aa12.27□□□□□ -0.45
CTSD-202ENST00000367196 RUSC1-AS1Q66K80 236 aa12.27□□□□□ -0.45
CTSD-202ENST00000367196 WDR82Q6UXN9 313 aa12.27□□□□□ -0.45
CTSD-202ENST00000367196 PRSS45Q7RTY3 260 aa12.27□□□□□ -0.45
CTSD-202ENST00000367196 GALNT4Q8N4A0 578 aa12.27□□□□□ -0.45
CTSD-202ENST00000367196 OR10Z1Q8NGY1 313 aa12.27□□□□□ -0.45
CTSD-202ENST00000367196 NPRL2Q8WTW4 380 aa12.27□□□□□ -0.45
CTSD-202ENST00000367196 LRTOMTQ8WZ04 291 aa12.27□□□□□ -0.45
CTSD-202ENST00000367196 DYRK2Q92630 601 aa12.27□□□□□ -0.45
CTSD-202ENST00000367196 LHX4Q969G2 390 aa12.27□□□□□ -0.45
CTSD-202ENST00000367196 CCDC124Q96CT7 223 aaKnown RBP12.27□□□□□ -0.45
CTSD-202ENST00000367196 FEVQ99581 238 aa12.27□□□□□ -0.45
CTSD-202ENST00000367196 NIPSNAP1Q9BPW8 284 aa12.27□□□□□ -0.45
CTSD-202ENST00000367196 CHIAQ9BZP6 476 aa12.27□□□□□ -0.45
CTSD-202ENST00000367196 SIRPDQ9H106 197 aa12.27□□□□□ -0.45
CTSD-202ENST00000367196 DNTTIP1Q9H147 329 aa12.27□□□□□ -0.45
CTSD-202ENST00000367196 TLNRD1Q9H1K6 362 aa12.27□□□□□ -0.45
CTSD-202ENST00000367196 NIPAL2Q9H841 368 aa12.27□□□□□ -0.45
CTSD-202ENST00000367196 CNTD2Q9H8S5 307 aa12.27□□□□□ -0.45
CTSD-202ENST00000367196 ZNF556Q9HAH1 456 aa12.27□□□□□ -0.45
CTSD-202ENST00000367196 TNFRSF19Q9NS68 423 aa12.27□□□□□ -0.45
CTSD-202ENST00000367196 VNN3Q9NY84 501 aa12.27□□□□□ -0.45
CTSD-202ENST00000367196 DNAJB11Q9UBS4 358 aa12.27□□□□□ -0.45
CTSD-202ENST00000367196 RPUSD1Q9UJJ7 312 aaKnown RBP12.27□□□□□ -0.45
CTSD-202ENST00000367196 IGHV3OR15-7A0A075B7D8 119 aa12.26□□□□□ -0.45
CTSD-202ENST00000367196 BTBD17A6NE02 478 aa12.26□□□□□ -0.45
CTSD-202ENST00000367196 NDUFB3O43676 98 aa12.26□□□□□ -0.45
CTSD-202ENST00000367196 OMGP23515 440 aa12.26□□□□□ -0.45
CTSD-202ENST00000367196 GYS2P54840 703 aa12.26□□□□□ -0.45
CTSD-202ENST00000367196 ARF6P62330 175 aa12.26□□□□□ -0.45
CTSD-202ENST00000367196 HOXA4Q00056 320 aaPredicted RBP12.26□□□□□ -0.45
CTSD-202ENST00000367196 GUCA2AQ02747 115 aa12.26□□□□□ -0.45
CTSD-202ENST00000367196 OLFML2AQ68BL7 652 aa12.26□□□□□ -0.45
CTSD-202ENST00000367196 LDLRAD3Q86YD5 345 aa12.26□□□□□ -0.45
CTSD-202ENST00000367196 TIGD4Q8IY51 512 aa12.26□□□□□ -0.45
CTSD-202ENST00000367196 KIR3DL3Q8N743 410 aa12.26□□□□□ -0.45
CTSD-202ENST00000367196 PAPD5Q8NDF8 572 aaKnown RBP12.26□□□□□ -0.45
CTSD-202ENST00000367196 OTOSQ8NHW6 89 aa12.26□□□□□ -0.45
CTSD-202ENST00000367196 ITFG2Q969R8 447 aa12.26□□□□□ -0.45
CTSD-202ENST00000367196 ITPKCQ96DU7 683 aa12.26□□□□□ -0.45
CTSD-202ENST00000367196 C1orf21Q9H246 121 aa12.26□□□□□ -0.45
CTSD-202ENST00000367196 OR51V1Q9H2C8 321 aa12.26□□□□□ -0.45
CTSD-202ENST00000367196 RASSF4Q9H2L5 321 aa12.26□□□□□ -0.45
CTSD-202ENST00000367196 DPAGT1Q9H3H5 408 aa12.26□□□□□ -0.45
CTSD-202ENST00000367196 YY1AP1Q9H869 796 aa12.26□□□□□ -0.45
CTSD-202ENST00000367196 MED20Q9H944 212 aa12.26□□□□□ -0.45
CTSD-202ENST00000367196 BRD7Q9NPI1 651 aa12.26□□□□□ -0.45
CTSD-202ENST00000367196 ONECUT1Q9UBC0 465 aa12.26□□□□□ -0.45
CTSD-202ENST00000367196 FAM96BQ9Y3D0 163 aa12.26□□□□□ -0.45
CTSD-202ENST00000367196 CLPSL1A2RUU4 121 aa12.25□□□□□ -0.45
CTSD-202ENST00000367196 E2F6O75461 281 aa12.25□□□□□ -0.45
CTSD-202ENST00000367196 POU1F1P28069 291 aa12.25□□□□□ -0.45
CTSD-202ENST00000367196 PSMA6P60900 246 aaKnown RBP12.25□□□□□ -0.45
CTSD-202ENST00000367196 CSNK2BP67870 215 aa12.25□□□□□ -0.45
CTSD-202ENST00000367196 MS4A2Q01362 244 aa12.25□□□□□ -0.45
CTSD-202ENST00000367196 WDR38Q5JTN6 314 aa12.25□□□□□ -0.45
CTSD-202ENST00000367196 SLC35D3Q5M8T2 416 aa12.25□□□□□ -0.45
CTSD-202ENST00000367196 METAP1DQ6UB28 335 aaPredicted RBP12.25□□□□□ -0.45
CTSD-202ENST00000367196 VMO1Q7Z5L0 202 aa12.25□□□□□ -0.45
CTSD-202ENST00000367196 WDR86Q86TI4 376 aa12.25□□□□□ -0.45
CTSD-202ENST00000367196 C11orf53Q8IXP5 236 aa12.25□□□□□ -0.45
CTSD-202ENST00000367196 IQCF1Q8N6M8 205 aa12.25□□□□□ -0.45
CTSD-202ENST00000367196 CCDC197Q8NCU1 140 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms