RNA–Protein interactions for RNA: ENST00000366764.6

CDC42BPA-202, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,445 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-202ENST00000366764 C15orf54Q8N8G6 183 aa10.61□□□□□ -0.71
CDC42BPA-202ENST00000366764 OR1N1Q8NGS0 311 aa10.61□□□□□ -0.71
CDC42BPA-202ENST00000366764 NLRC5Q86WI3 1866 aa10.61□□□□□ -0.71
CDC42BPA-202ENST00000366764 ZNF724A8MTY0 619 aa10.61□□□□□ -0.71
CDC42BPA-202ENST00000366764 CTSVO60911 334 aa10.61□□□□□ -0.71
CDC42BPA-202ENST00000366764 CD46P15529 392 aa10.61□□□□□ -0.71
CDC42BPA-202ENST00000366764 ZNF121P58317 390 aaPredicted RBP10.61□□□□□ -0.71
CDC42BPA-202ENST00000366764 GAR1Q9NY12 217 aaKnown RBP10.61□□□□□ -0.71
CDC42BPA-202ENST00000366764 CLDN15P56746 228 aa10.61□□□□□ -0.71
CDC42BPA-202ENST00000366764 ENDOGQ14249 297 aaKnown RBP10.61□□□□□ -0.71
CDC42BPA-202ENST00000366764 ZNF573Q86YE8 665 aa10.61□□□□□ -0.71
CDC42BPA-202ENST00000366764 OR5T1Q8NG75 326 aa10.61□□□□□ -0.71
CDC42BPA-202ENST00000366764 HSD17B8Q92506 261 aa10.61□□□□□ -0.71
CDC42BPA-202ENST00000366764 PIGTQ969N2 578 aa10.61□□□□□ -0.71
CDC42BPA-202ENST00000366764 KTI12Q96EK9 354 aaPredicted RBP10.61□□□□□ -0.71
CDC42BPA-202ENST00000366764 PIK3IP1Q96FE7 263 aa10.61□□□□□ -0.71
CDC42BPA-202ENST00000366764 UTP23Q9BRU9 249 aaKnown RBP10.61□□□□□ -0.71
CDC42BPA-202ENST00000366764 CABLES2Q9BTV7 478 aa10.61□□□□□ -0.71
CDC42BPA-202ENST00000366764 DHCR7Q9UBM7 475 aaKnown RBP10.61□□□□□ -0.71
CDC42BPA-202ENST00000366764 FRMPD3Q5JV73 1810 aa10.61□□□□□ -0.71
CDC42BPA-202ENST00000366764 TNS1Q9HBL0 1735 aaKnown RBP10.61□□□□□ -0.71
CDC42BPA-202ENST00000366764 HIST1H1DP16402 221 aaKnown RBP10.61□□□□□ -0.71
CDC42BPA-202ENST00000366764 CXCL3P19876 107 aa10.61□□□□□ -0.71
CDC42BPA-202ENST00000366764 NOXO1Q8NFA2 376 aa10.61□□□□□ -0.71
CDC42BPA-202ENST00000366764 SPACA9Q96E40 222 aaPredicted RBP10.61□□□□□ -0.71
CDC42BPA-202ENST00000366764 SHARPINQ9H0F6 387 aa10.61□□□□□ -0.71
CDC42BPA-202ENST00000366764 GCM1Q9NP62 436 aa10.61□□□□□ -0.71
CDC42BPA-202ENST00000366764 ZNF687Q8N1G0 1237 aa10.6□□□□□ -0.71
CDC42BPA-202ENST00000366764 NPEPL1Q8NDH3 523 aa10.6□□□□□ -0.71
CDC42BPA-202ENST00000366764 SMDT1Q9H4I9 107 aa10.6□□□□□ -0.71
CDC42BPA-202ENST00000366764 NOSIPQ9Y314 301 aaKnown RBP10.6□□□□□ -0.71
CDC42BPA-202ENST00000366764 C9orf170A2RU37 121 aa10.6□□□□□ -0.71
CDC42BPA-202ENST00000366764 H0Y8X5 98 aa10.6□□□□□ -0.71
CDC42BPA-202ENST00000366764 NME2P1O60361 137 aa10.6□□□□□ -0.71
CDC42BPA-202ENST00000366764 SCO1O75880 301 aa10.6□□□□□ -0.71
CDC42BPA-202ENST00000366764 NME1P15531 152 aaKnown RBP10.6□□□□□ -0.71
CDC42BPA-202ENST00000366764 PPP1R1AQ13522 171 aa10.6□□□□□ -0.71
CDC42BPA-202ENST00000366764 MLF2Q15773 248 aaPredicted RBP10.6□□□□□ -0.71
CDC42BPA-202ENST00000366764 PRSS54Q6PEW0 395 aa10.6□□□□□ -0.71
CDC42BPA-202ENST00000366764 TMEM217Q8N7C4 229 aa10.6□□□□□ -0.71
CDC42BPA-202ENST00000366764 BPIFCQ8NFQ6 507 aa10.6□□□□□ -0.71
CDC42BPA-202ENST00000366764 CORO2AQ92828 525 aa10.6□□□□□ -0.71
CDC42BPA-202ENST00000366764 VSTM2LQ96N03 204 aa10.6□□□□□ -0.71
CDC42BPA-202ENST00000366764 IP6K3Q96PC2 410 aa10.6□□□□□ -0.71
CDC42BPA-202ENST00000366764 LPAR3Q9UBY5 353 aa10.6□□□□□ -0.71
CDC42BPA-202ENST00000366764 SPINT2O43291 252 aa10.6□□□□□ -0.71
CDC42BPA-202ENST00000366764 RAB13P51153 203 aa10.6□□□□□ -0.71
CDC42BPA-202ENST00000366764 OR6C1Q96RD1 312 aa10.6□□□□□ -0.71
CDC42BPA-202ENST00000366764 OR4C45A6NMZ5 311 aa10.6□□□□□ -0.71
CDC42BPA-202ENST00000366764 DTYMKP23919 212 aa10.6□□□□□ -0.71
CDC42BPA-202ENST00000366764 ARR3P36575 388 aa10.6□□□□□ -0.71
CDC42BPA-202ENST00000366764 ADIRFQ15847 76 aa10.6□□□□□ -0.71
CDC42BPA-202ENST00000366764 DCAF12Q5T6F0 453 aa10.6□□□□□ -0.71
CDC42BPA-202ENST00000366764 SLC39A7Q92504 469 aa10.6□□□□□ -0.71
CDC42BPA-202ENST00000366764 PINX1Q96BK5 328 aaKnown RBP10.6□□□□□ -0.71
CDC42BPA-202ENST00000366764 SEC11CQ9BY50 192 aa10.6□□□□□ -0.71
CDC42BPA-202ENST00000366764 SPTY2D1-AS1A0A0U1RR47 76 aa10.6□□□□□ -0.71
CDC42BPA-202ENST00000366764 RPS4Y2Q8TD47 263 aa10.6□□□□□ -0.71
CDC42BPA-202ENST00000366764 PRRX2Q99811 253 aa10.6□□□□□ -0.71
CDC42BPA-202ENST00000366764 GNG12Q9UBI6 72 aa10.6□□□□□ -0.71
CDC42BPA-202ENST00000366764 DCTN6O00399 190 aa10.6□□□□□ -0.71
CDC42BPA-202ENST00000366764 AKR1C1Q04828 323 aa10.6□□□□□ -0.71
CDC42BPA-202ENST00000366764 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.6□□□□□ -0.713e-11■■■□□ 16.9
CDC42BPA-202ENST00000366764 PLCE1Q9P212 2302 aa10.6□□□□□ -0.71
CDC42BPA-202ENST00000366764 METTL15P1P0C7V9 234 aa10.6□□□□□ -0.71
CDC42BPA-202ENST00000366764 INPP5JQ15735 1006 aaPredicted RBP10.6□□□□□ -0.71
CDC42BPA-202ENST00000366764 FAM74A1Q5RGS3 127 aa10.6□□□□□ -0.71
CDC42BPA-202ENST00000366764 PARM1Q6UWI2 310 aa10.6□□□□□ -0.71
CDC42BPA-202ENST00000366764 ZNF816-ZNF321PA0A0X1KG74 233 aa10.6□□□□□ -0.71
CDC42BPA-202ENST00000366764 SSSCA1O60232 199 aa10.6□□□□□ -0.71
CDC42BPA-202ENST00000366764 ETFBKMTQ8IXQ9 262 aa10.6□□□□□ -0.71
CDC42BPA-202ENST00000366764 MED9Q9NWA0 146 aa10.6□□□□□ -0.71
CDC42BPA-202ENST00000366764 FUT6P51993 359 aa10.6□□□□□ -0.71
CDC42BPA-202ENST00000366764 NDUFA6P56556 154 aa10.6□□□□□ -0.71
CDC42BPA-202ENST00000366764 UBE3DQ7Z6J8 389 aa10.6□□□□□ -0.71
CDC42BPA-202ENST00000366764 SLC25A42Q86VD7 318 aa10.6□□□□□ -0.71
CDC42BPA-202ENST00000366764 MRM2Q9UI43 246 aaKnown RBP10.6□□□□□ -0.71
CDC42BPA-202ENST00000366764 CYB5BO43169 146 aa10.59□□□□□ -0.71
CDC42BPA-202ENST00000366764 MBTPS2O43462 519 aa10.59□□□□□ -0.71
CDC42BPA-202ENST00000366764 GUSBP08236 651 aa10.59□□□□□ -0.71
CDC42BPA-202ENST00000366764 CSF2RBP32927 897 aa10.59□□□□□ -0.71
CDC42BPA-202ENST00000366764 NAAAQ02083 359 aa10.59□□□□□ -0.71
CDC42BPA-202ENST00000366764 C19orf48Q6RUI8 117 aa10.59□□□□□ -0.71
CDC42BPA-202ENST00000366764 TMEM91Q6ZNR0 172 aa10.59□□□□□ -0.71
CDC42BPA-202ENST00000366764 INSL4Q14641 139 aa10.59□□□□□ -0.71
CDC42BPA-202ENST00000366764 CYB561P49447 251 aa10.59□□□□□ -0.71
CDC42BPA-202ENST00000366764 LANCL3Q6ZV70 420 aa10.59□□□□□ -0.71
CDC42BPA-202ENST00000366764 MRGPREQ86SM8 312 aa10.59□□□□□ -0.71
CDC42BPA-202ENST00000366764 RPS19BP1Q86WX3 136 aaKnown RBP10.59□□□□□ -0.71
CDC42BPA-202ENST00000366764 PBX4Q9BYU1 374 aa10.59□□□□□ -0.71
CDC42BPA-202ENST00000366764 RYDENQ9NUL5 291 aaKnown RBP10.59□□□□□ -0.71
CDC42BPA-202ENST00000366764 PPM1DO15297 605 aa10.59□□□□□ -0.71
CDC42BPA-202ENST00000366764 NXPH2O95156 264 aa10.59□□□□□ -0.71
CDC42BPA-202ENST00000366764 OR11H7Q8NGC8 314 aa10.59□□□□□ -0.71
CDC42BPA-202ENST00000366764 OR4D11Q8NGI4 311 aa10.59□□□□□ -0.71
CDC42BPA-202ENST00000366764 TOLLIPQ9H0E2 274 aa10.59□□□□□ -0.71
CDC42BPA-202ENST00000366764 ABCA4P78363 2273 aa10.59□□□□□ -0.71
CDC42BPA-202ENST00000366764 OR13C7P0DN81 318 aa10.59□□□□□ -0.71
CDC42BPA-202ENST00000366764 PAX6P26367 422 aa10.59□□□□□ -0.71
CDC42BPA-202ENST00000366764 CDKN2AP42771 156 aaKnown RBP10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms