RNA–Protein interactions for RNA: ENST00000361311.4

CLSTN1-201, Transcript of calsyntenin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLSTN1, Length 4,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-201ENST00000361311 KLK3P07288 261 aaPredicted RBP14.33□□□□□ -0.12
CLSTN1-201ENST00000361311 RAC2P15153 192 aa14.33□□□□□ -0.12
CLSTN1-201ENST00000361311 THNSL2Q86YJ6 484 aa14.33□□□□□ -0.12
CLSTN1-201ENST00000361311 MISPQ8IVT2 679 aa14.33□□□□□ -0.12
CLSTN1-201ENST00000361311 RPUSD4Q96CM3 377 aaKnown RBP14.33□□□□□ -0.12
CLSTN1-201ENST00000361311 FAM210BQ96KR6 192 aa14.33□□□□□ -0.12
CLSTN1-201ENST00000361311 MRGPRX3Q96LB0 322 aa14.33□□□□□ -0.12
CLSTN1-201ENST00000361311 TSPAN32Q96QS1 320 aa14.33□□□□□ -0.12
CLSTN1-201ENST00000361311 VSIG4Q9Y279 399 aa14.33□□□□□ -0.12
CLSTN1-201ENST00000361311 TMEM184BQ9Y519 407 aaPredicted RBP14.33□□□□□ -0.12
CLSTN1-201ENST00000361311 CCDC187A0A096LP49 1063 aa14.33□□□□□ -0.12
CLSTN1-201ENST00000361311 CD1AP06126 327 aa14.33□□□□□ -0.12
CLSTN1-201ENST00000361311 HNRNPKP61978 463 aaKnown RBP eCLIP14.33□□□□□ -0.125e-8■■■■■ 32.6
CLSTN1-201ENST00000361311 TMEM31Q5JXX7 168 aa14.33□□□□□ -0.12
CLSTN1-201ENST00000361311 ZNF787Q6DD87 383 aa14.33□□□□□ -0.12
CLSTN1-201ENST00000361311 FAM219AQ8IW50 185 aa14.33□□□□□ -0.12
CLSTN1-201ENST00000361311 SLC37A2Q8TED4 501 aa14.33□□□□□ -0.12
CLSTN1-201ENST00000361311 GDE1Q9NZC3 331 aa14.33□□□□□ -0.12
CLSTN1-201ENST00000361311 ZNF107Q9UII5 783 aaPredicted RBP14.33□□□□□ -0.12
CLSTN1-201ENST00000361311 RCL1Q9Y2P8 373 aaKnown RBP14.33□□□□□ -0.12
CLSTN1-201ENST00000361311 CLDN34H7C241 214 aa14.33□□□□□ -0.12
CLSTN1-201ENST00000361311 ICOSLGO75144 302 aa14.33□□□□□ -0.12
CLSTN1-201ENST00000361311 RTL10Q7L3V2 364 aa14.33□□□□□ -0.12
CLSTN1-201ENST00000361311 SEMA6DQ8NFY4 1073 aa14.33□□□□□ -0.12
CLSTN1-201ENST00000361311 OR52N4Q8NGI2 321 aa14.33□□□□□ -0.12
CLSTN1-201ENST00000361311 TXN2Q99757 166 aa14.33□□□□□ -0.12
CLSTN1-201ENST00000361311 PLEKHA3Q9HB20 300 aa14.33□□□□□ -0.12
CLSTN1-201ENST00000361311 DHCR7Q9UBM7 475 aaKnown RBP14.33□□□□□ -0.12
CLSTN1-201ENST00000361311 A0A0G2JK05 382 aa14.32□□□□□ -0.12
CLSTN1-201ENST00000361311 H0Y8X5 98 aa14.32□□□□□ -0.12
CLSTN1-201ENST00000361311 CST7O76096 145 aa14.32□□□□□ -0.12
CLSTN1-201ENST00000361311 YIF1AO95070 293 aa14.32□□□□□ -0.12
CLSTN1-201ENST00000361311 MLF2Q15773 248 aaPredicted RBP14.32□□□□□ -0.12
CLSTN1-201ENST00000361311 TMEM255AQ5JRV8 349 aa14.32□□□□□ -0.12
CLSTN1-201ENST00000361311 MRPL21Q7Z2W9 205 aaKnown RBP14.32□□□□□ -0.12
CLSTN1-201ENST00000361311 BCO1Q9HAY6 547 aa14.32□□□□□ -0.12
CLSTN1-201ENST00000361311 HSPB6O14558 160 aa14.32□□□□□ -0.12
CLSTN1-201ENST00000361311 PRICKLE4Q2TBC4 344 aa14.32□□□□□ -0.12
CLSTN1-201ENST00000361311 PRSS41Q7RTY9 318 aa14.32□□□□□ -0.12
CLSTN1-201ENST00000361311 ADAD2Q8NCV1 583 aaKnown RBP14.32□□□□□ -0.12
CLSTN1-201ENST00000361311 MDFIC2A0A1B0GVS7 189 aa14.32□□□□□ -0.12
CLSTN1-201ENST00000361311 SERPINE3A8MV23 424 aa14.32□□□□□ -0.12
CLSTN1-201ENST00000361311 CLDN1O95832 211 aa14.32□□□□□ -0.12
CLSTN1-201ENST00000361311 ST6GAL1P15907 406 aa14.32□□□□□ -0.12
CLSTN1-201ENST00000361311 CDC20BQ86Y33 519 aa14.32□□□□□ -0.12
CLSTN1-201ENST00000361311 GJC3Q8NFK1 279 aa14.32□□□□□ -0.12
CLSTN1-201ENST00000361311 LHX4Q969G2 390 aa14.32□□□□□ -0.12
CLSTN1-201ENST00000361311 ALKBH4Q9NXW9 302 aa14.32□□□□□ -0.12
CLSTN1-201ENST00000361311 CTSVO60911 334 aa14.32□□□□□ -0.12
CLSTN1-201ENST00000361311 IL33O95760 270 aa14.32□□□□□ -0.12
CLSTN1-201ENST00000361311 CT62P0C5K7 136 aa14.32□□□□□ -0.12
CLSTN1-201ENST00000361311 PHF19Q5T6S3 580 aa14.32□□□□□ -0.12
CLSTN1-201ENST00000361311 ZAR1Q86SH2 424 aa14.32□□□□□ -0.12
CLSTN1-201ENST00000361311 GPR119Q8TDV5 335 aa14.32□□□□□ -0.12
CLSTN1-201ENST00000361311 ZNF775Q96BV0 537 aaPredicted RBP14.32□□□□□ -0.12
CLSTN1-201ENST00000361311 INTS12Q96CB8 462 aaKnown RBP14.32□□□□□ -0.12
CLSTN1-201ENST00000361311 CHST11Q9NPF2 352 aa14.32□□□□□ -0.12
CLSTN1-201ENST00000361311 PARP11Q9NR21 331 aa14.32□□□□□ -0.12
CLSTN1-201ENST00000361311 MMACHCQ9Y4U1 282 aa14.32□□□□□ -0.12
CLSTN1-201ENST00000361311 TRPM6Q9BX84 2022 aa14.31□□□□□ -0.12
CLSTN1-201ENST00000361311 TCAPO15273 167 aa14.31□□□□□ -0.12
CLSTN1-201ENST00000361311 HOXC12P31275 282 aa14.31□□□□□ -0.12
CLSTN1-201ENST00000361311 ZNF66Q6ZN08 573 aa14.31□□□□□ -0.12
CLSTN1-201ENST00000361311 SHDQ96IW2 340 aa14.31□□□□□ -0.12
CLSTN1-201ENST00000361311 LINC00587B1AMM8 73 aa14.31□□□□□ -0.12
CLSTN1-201ENST00000361311 SNCAP37840 140 aa14.31□□□□□ -0.12
CLSTN1-201ENST00000361311 NOVA1P51513 510 aaKnown RBP14.31□□□□□ -0.12
CLSTN1-201ENST00000361311 YPEL5P62699 121 aa14.31□□□□□ -0.12
CLSTN1-201ENST00000361311 NCR3LG1Q68D85 454 aa14.31□□□□□ -0.12
CLSTN1-201ENST00000361311 HINT2Q9BX68 163 aa14.31□□□□□ -0.12
CLSTN1-201ENST00000361311 GCM1Q9NP62 436 aa14.31□□□□□ -0.12
CLSTN1-201ENST00000361311 GPR173Q9NS66 373 aa14.31□□□□□ -0.12
CLSTN1-201ENST00000361311 CD1CP29017 333 aa14.31□□□□□ -0.12
CLSTN1-201ENST00000361311 HTR5AP47898 357 aa14.31□□□□□ -0.12
CLSTN1-201ENST00000361311 SLC37A1P57057 533 aa14.31□□□□□ -0.12
CLSTN1-201ENST00000361311 DHRS7BQ6IAN0 325 aaPredicted RBP14.31□□□□□ -0.12
CLSTN1-201ENST00000361311 PSMF1Q92530 271 aa14.31□□□□□ -0.12
CLSTN1-201ENST00000361311 POLR2GP62487 172 aaKnown RBP eCLIP14.3□□□□□ -0.12
CLSTN1-201ENST00000361311 MSMO1Q15800 293 aa14.3□□□□□ -0.12
CLSTN1-201ENST00000361311 NSUN5P2Q63ZY6 315 aa14.3□□□□□ -0.12
CLSTN1-201ENST00000361311 ZPLD1Q8TCW7 415 aa14.3□□□□□ -0.12
CLSTN1-201ENST00000361311 LOC102725191A0A1B0GVB3 256 aa14.3□□□□□ -0.12
CLSTN1-201ENST00000361311 TMEM229AB2RXF0 380 aa14.3□□□□□ -0.12
CLSTN1-201ENST00000361311 TRAPPC2LH3BP13 241 aa14.3□□□□□ -0.12
CLSTN1-201ENST00000361311 HFEQ30201 348 aa14.3□□□□□ -0.12
CLSTN1-201ENST00000361311 EIF4E3Q8N5X7 224 aaKnown RBP14.3□□□□□ -0.12
CLSTN1-201ENST00000361311 SERTAD4Q9NUC0 356 aa14.3□□□□□ -0.12
CLSTN1-201ENST00000361311 GPR37O15354 613 aa14.3□□□□□ -0.12
CLSTN1-201ENST00000361311 OR13D1Q8NGV5 346 aa14.3□□□□□ -0.12
CLSTN1-201ENST00000361311 OR51H1Q8NH63 302 aa14.3□□□□□ -0.12
CLSTN1-201ENST00000361311 A0A1W2PPV9 198 aa14.3□□□□□ -0.12
CLSTN1-201ENST00000361311 CTLA4P16410 223 aa14.3□□□□□ -0.12
CLSTN1-201ENST00000361311 ZNF684Q5T5D7 378 aa14.3□□□□□ -0.12
CLSTN1-201ENST00000361311 TMEM37Q8WXS4 190 aa14.3□□□□□ -0.12
CLSTN1-201ENST00000361311 ELOA3CA0A087WX78 387 aaPredicted RBP14.29□□□□□ -0.12
CLSTN1-201ENST00000361311 RBP2P50120 134 aa14.29□□□□□ -0.12
CLSTN1-201ENST00000361311 BAXQ07812 192 aa14.29□□□□□ -0.12
CLSTN1-201ENST00000361311 ISXQ2M1V0 245 aa14.29□□□□□ -0.12
CLSTN1-201ENST00000361311 OR8G2PQ6IF36 304 aa14.29□□□□□ -0.12
CLSTN1-201ENST00000361311 RPS4Y2Q8TD47 263 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms