RNA–Protein interactions for RNA: ENST00000361309.5

CD47-202, Transcript of CD47 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD47, Length 1,285 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-202ENST00000361309 SAA4P35542 130 aa17.28■□□□□ 0.36
CD47-202ENST00000361309 NAA10P41227 235 aaPredicted RBP17.28■□□□□ 0.36
CD47-202ENST00000361309 TGM4P49221 684 aa17.28■□□□□ 0.36
CD47-202ENST00000361309 ENTPD1P49961 510 aa17.28■□□□□ 0.36
CD47-202ENST00000361309 LRRC10Q5BKY1 277 aa17.28■□□□□ 0.36
CD47-202ENST00000361309 HIST2H2BDQ6DRA6 164 aa17.28■□□□□ 0.36
CD47-202ENST00000361309 PGBD2Q6P3X8 592 aa17.28■□□□□ 0.36
CD47-202ENST00000361309 ZNF511Q8NB15 262 aa17.28■□□□□ 0.36
CD47-202ENST00000361309 OR52L1Q8NGH7 329 aa17.28■□□□□ 0.36
CD47-202ENST00000361309 OR9Q1Q8NGQ5 310 aa17.28■□□□□ 0.36
CD47-202ENST00000361309 C8orf46Q8TAG6 207 aa17.28■□□□□ 0.36
CD47-202ENST00000361309 TNFRSF14Q92956 283 aa17.28■□□□□ 0.36
CD47-202ENST00000361309 C12orf43Q96C57 262 aaKnown RBP17.28■□□□□ 0.36
CD47-202ENST00000361309 GORASP2Q9H8Y8 452 aa17.28■□□□□ 0.36
CD47-202ENST00000361309 SIGLEC9Q9Y336 463 aa17.28■□□□□ 0.36
CD47-202ENST00000361309 ZNF878C9JN71 531 aa17.27■□□□□ 0.36
CD47-202ENST00000361309 ZNF593O00488 134 aaPredicted RBP17.27■□□□□ 0.36
CD47-202ENST00000361309 CDIPTO14735 213 aa17.27■□□□□ 0.36
CD47-202ENST00000361309 TIPRLO75663 272 aa17.27■□□□□ 0.36
CD47-202ENST00000361309 ANXA2P07355 339 aaKnown RBP17.27■□□□□ 0.36
CD47-202ENST00000361309 FMO3P31513 532 aa17.27■□□□□ 0.36
CD47-202ENST00000361309 GABRA5P31644 462 aa17.27■□□□□ 0.36
CD47-202ENST00000361309 CX3CR1P49238 355 aa17.27■□□□□ 0.36
CD47-202ENST00000361309 GMFBP60983 142 aa17.27■□□□□ 0.36
CD47-202ENST00000361309 HERPUD1Q15011 391 aa17.27■□□□□ 0.36
CD47-202ENST00000361309 TIGD6Q17RP2 521 aa17.27■□□□□ 0.36
CD47-202ENST00000361309 STUMQ69YW2 141 aa17.27■□□□□ 0.36
CD47-202ENST00000361309 Q6ZTK2 550 aa17.27■□□□□ 0.36
CD47-202ENST00000361309 SLC37A3Q8NCC5 494 aa17.27■□□□□ 0.36
CD47-202ENST00000361309 SGK3Q96BR1 496 aa17.27■□□□□ 0.36
CD47-202ENST00000361309 REEP6Q96HR9 211 aa17.27■□□□□ 0.36
CD47-202ENST00000361309 SPAG4Q9NPE6 437 aa17.27■□□□□ 0.36
CD47-202ENST00000361309 SNTG1Q9NSN8 517 aa17.27■□□□□ 0.36
CD47-202ENST00000361309 ARGLU1Q9NWB6 273 aaPredicted RBP17.27■□□□□ 0.36
CD47-202ENST00000361309 CDH10Q9Y6N8 788 aa17.27■□□□□ 0.36
CD47-202ENST00000361309 PRB2P02812 416 aaPredicted RBP17.26■□□□□ 0.35
CD47-202ENST00000361309 OPN1MWP04001 364 aa17.26■□□□□ 0.35
CD47-202ENST00000361309 GYPBP06028 91 aa17.26■□□□□ 0.35
CD47-202ENST00000361309 OPN1MW2P0DN77 364 aa17.26■□□□□ 0.35
CD47-202ENST00000361309 OPN1MW3P0DN78 364 aa17.26■□□□□ 0.35
CD47-202ENST00000361309 UBE2E1P51965 193 aa17.26■□□□□ 0.35
CD47-202ENST00000361309 ATPAF1Q5TC12 328 aaPredicted RBP17.26■□□□□ 0.35
CD47-202ENST00000361309 MCUR1Q96AQ8 359 aa17.26■□□□□ 0.35
CD47-202ENST00000361309 TLNRD1Q9H1K6 362 aa17.26■□□□□ 0.35
CD47-202ENST00000361309 HAO2Q9NYQ3 351 aa17.26■□□□□ 0.35
CD47-202ENST00000361309 hCG_38984A0A1B0GV85 526 aa17.25■□□□□ 0.35
CD47-202ENST00000361309 TFF1P04155 84 aa17.25■□□□□ 0.35
CD47-202ENST00000361309 FABP3P05413 133 aa17.25■□□□□ 0.35
CD47-202ENST00000361309 H2AFXP16104 143 aaPredicted RBP17.25■□□□□ 0.35
CD47-202ENST00000361309 SLC15A1P46059 708 aa17.25■□□□□ 0.35
CD47-202ENST00000361309 GRB2P62993 217 aaKnown RBP17.25■□□□□ 0.35
CD47-202ENST00000361309 KLHL12Q53G59 568 aa17.25■□□□□ 0.35
CD47-202ENST00000361309 TEX30Q5JUR7 227 aa17.25■□□□□ 0.35
CD47-202ENST00000361309 KPRPQ5T749 579 aaPredicted RBP17.25■□□□□ 0.35
CD47-202ENST00000361309 SAMD5Q5TGI4 173 aa17.25■□□□□ 0.35
CD47-202ENST00000361309 RPL13AP3Q6NVV1 102 aa17.25■□□□□ 0.35
CD47-202ENST00000361309 C1orf122Q6ZSJ8 110 aa17.25■□□□□ 0.35
CD47-202ENST00000361309 C11orf44Q8N8P7 122 aa17.25■□□□□ 0.35
CD47-202ENST00000361309 PPP1R35Q8TAP8 253 aa17.25■□□□□ 0.35
CD47-202ENST00000361309 PAPOLGQ9BWT3 736 aaKnown RBP17.25■□□□□ 0.35
CD47-202ENST00000361309 WDR13Q9H1Z4 485 aa17.25■□□□□ 0.35
CD47-202ENST00000361309 CD300AQ9UGN4 299 aa17.25■□□□□ 0.35
CD47-202ENST00000361309 ZNF391Q9UJN7 358 aa17.25■□□□□ 0.35
CD47-202ENST00000361309 FOXJ3Q9UPW0 622 aa17.25■□□□□ 0.35
CD47-202ENST00000361309 RHBDD3Q9Y3P4 386 aa17.25■□□□□ 0.35
CD47-202ENST00000361309 DHRS12A0PJE2 317 aa17.24■□□□□ 0.35
CD47-202ENST00000361309 H3BUX3 64 aa17.24■□□□□ 0.35
CD47-202ENST00000361309 HSD11B1P28845 292 aa17.24■□□□□ 0.35
CD47-202ENST00000361309 GNALP38405 381 aa17.24■□□□□ 0.35
CD47-202ENST00000361309 GSK3AP49840 483 aa17.24■□□□□ 0.35
CD47-202ENST00000361309 EFNB2P52799 333 aa17.24■□□□□ 0.35
CD47-202ENST00000361309 ACSM1Q08AH1 577 aa17.24■□□□□ 0.35
CD47-202ENST00000361309 GFOD2Q3B7J2 385 aa17.24■□□□□ 0.35
CD47-202ENST00000361309 FAM57BQ71RH2 274 aa17.24■□□□□ 0.35
CD47-202ENST00000361309 BEND2Q8NDZ0 799 aa17.24■□□□□ 0.35
CD47-202ENST00000361309 OR9Q2Q8NGE9 314 aa17.24■□□□□ 0.35
CD47-202ENST00000361309 OR8D4Q8NGM9 314 aa17.24■□□□□ 0.35
CD47-202ENST00000361309 C17orf50Q8WW18 174 aa17.24■□□□□ 0.35
CD47-202ENST00000361309 RAB3IPQ96QF0 476 aaPredicted RBP17.24■□□□□ 0.35
CD47-202ENST00000361309 MICU1Q9BPX6 476 aa17.24■□□□□ 0.35
CD47-202ENST00000361309 DNTTIP1Q9H147 329 aa17.24■□□□□ 0.35
CD47-202ENST00000361309 CCDC134Q9H6E4 229 aa17.24■□□□□ 0.35
CD47-202ENST00000361309 IL20Q9NYY1 176 aa17.24■□□□□ 0.35
CD47-202ENST00000361309 SLC25A10Q9UBX3 287 aaPredicted RBP17.24■□□□□ 0.35
CD47-202ENST00000361309 NKX6-3A6NJ46 265 aa17.23■□□□□ 0.35
CD47-202ENST00000361309 M0R1W7 72 aa17.23■□□□□ 0.35
CD47-202ENST00000361309 CLUP10909 449 aa17.23■□□□□ 0.35
CD47-202ENST00000361309 SPI1P17947 270 aa17.23■□□□□ 0.35
CD47-202ENST00000361309 CRMP1Q14194 572 aa17.23■□□□□ 0.35
CD47-202ENST00000361309 EIF2B1Q14232 305 aaKnown RBP17.23■□□□□ 0.35
CD47-202ENST00000361309 FAM189A2Q15884 450 aa17.23■□□□□ 0.35
CD47-202ENST00000361309 LY6EQ16553 131 aa17.23■□□□□ 0.35
CD47-202ENST00000361309 DGUOKQ16854 277 aa17.23■□□□□ 0.35
CD47-202ENST00000361309 NCR3LG1Q68D85 454 aa17.23■□□□□ 0.35
CD47-202ENST00000361309 Q6ZPA2 131 aa17.23■□□□□ 0.35
CD47-202ENST00000361309 ZNF788Q6ZQV5 615 aa17.23■□□□□ 0.35
CD47-202ENST00000361309 PRSS45Q7RTY3 260 aa17.23■□□□□ 0.35
CD47-202ENST00000361309 OR6K6Q8NGW6 343 aa17.23■□□□□ 0.35
CD47-202ENST00000361309 RPL3LQ92901 407 aaKnown RBP17.23■□□□□ 0.35
CD47-202ENST00000361309 ITPKCQ96DU7 683 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms