RNA–Protein interactions for RNA: ENST00000360718.5

SQSTM1-201, Transcript of sequestosome 1, humanhuman

TSL 1 (best) BASIC

Gene SQSTM1, Length 2,253 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-201ENST00000360718 STEAP1BQ6NZ63 245 aa11.56□□□□□ -0.56
SQSTM1-201ENST00000360718 LRFN4Q6PJG9 635 aa11.56□□□□□ -0.56
SQSTM1-201ENST00000360718 TMUB2Q71RG4 321 aa11.56□□□□□ -0.56
SQSTM1-201ENST00000360718 CDH26Q8IXH8 852 aa11.56□□□□□ -0.56
SQSTM1-201ENST00000360718 OR51S1Q8NGJ8 323 aa11.56□□□□□ -0.56
SQSTM1-201ENST00000360718 SCARB1Q8WTV0 552 aa11.56□□□□□ -0.56
SQSTM1-201ENST00000360718 WDYHV1Q96HA8 205 aa11.56□□□□□ -0.56
SQSTM1-201ENST00000360718 SCPEP1Q9HB40 452 aa11.56□□□□□ -0.56
SQSTM1-201ENST00000360718 PARPBPQ9NWS1 579 aa11.56□□□□□ -0.56
SQSTM1-201ENST00000360718 PFDN2Q9UHV9 154 aa11.56□□□□□ -0.56
SQSTM1-201ENST00000360718 TP53TG5Q9Y2B4 290 aa11.56□□□□□ -0.56
SQSTM1-201ENST00000360718 NOSIPQ9Y314 301 aaKnown RBP11.56□□□□□ -0.56
SQSTM1-201ENST00000360718 FREM1Q5H8C1 2179 aa11.56□□□□□ -0.56
SQSTM1-201ENST00000360718 IGKV3D-15A0A087WSY6 115 aa11.56□□□□□ -0.56
SQSTM1-201ENST00000360718 GOSR2O14653 212 aa11.56□□□□□ -0.56
SQSTM1-201ENST00000360718 ARPC5O15511 151 aa11.56□□□□□ -0.56
SQSTM1-201ENST00000360718 MELTFP08582 738 aa11.56□□□□□ -0.56
SQSTM1-201ENST00000360718 ITGA5P08648 1049 aa11.56□□□□□ -0.56
SQSTM1-201ENST00000360718 CALCRP30988 508 aa11.56□□□□□ -0.56
SQSTM1-201ENST00000360718 EFNB2P52799 333 aa11.56□□□□□ -0.56
SQSTM1-201ENST00000360718 PLEKHN1Q494U1 663 aaPredicted RBP11.56□□□□□ -0.56
SQSTM1-201ENST00000360718 C4orf46Q504U0 113 aa11.56□□□□□ -0.56
SQSTM1-201ENST00000360718 PHYHD1Q5SRE7 291 aa11.56□□□□□ -0.56
SQSTM1-201ENST00000360718 C10orf128Q5T292 105 aa11.56□□□□□ -0.56
SQSTM1-201ENST00000360718 C11orf88Q6PI97 169 aa11.56□□□□□ -0.56
SQSTM1-201ENST00000360718 IQCF2Q8IXL9 164 aa11.56□□□□□ -0.56
SQSTM1-201ENST00000360718 C20orf196Q8IYI0 205 aa11.56□□□□□ -0.56
SQSTM1-201ENST00000360718 GPR137CQ8N3F9 429 aa11.56□□□□□ -0.56
SQSTM1-201ENST00000360718 TMEM229BQ8NBD8 167 aa11.56□□□□□ -0.56
SQSTM1-201ENST00000360718 FNDC9Q8TBE3 224 aa11.56□□□□□ -0.56
SQSTM1-201ENST00000360718 GPX8Q8TED1 209 aa11.56□□□□□ -0.56
SQSTM1-201ENST00000360718 C11orf40Q8WZ69 217 aa11.56□□□□□ -0.56
SQSTM1-201ENST00000360718 AMELYQ99218 206 aa11.56□□□□□ -0.56
SQSTM1-201ENST00000360718 SLC25A21Q9BQT8 299 aaPredicted RBP11.56□□□□□ -0.56
SQSTM1-201ENST00000360718 LHX6Q9UPM6 363 aa11.56□□□□□ -0.56
SQSTM1-201ENST00000360718 H3BSH0 61 aa11.55□□□□□ -0.56
SQSTM1-201ENST00000360718 AQP7O14520 342 aa11.55□□□□□ -0.56
SQSTM1-201ENST00000360718 MRPL33O75394 65 aaKnown RBP11.55□□□□□ -0.56
SQSTM1-201ENST00000360718 WNT11O96014 354 aa11.55□□□□□ -0.56
SQSTM1-201ENST00000360718 HTR2CP28335 458 aa11.55□□□□□ -0.56
SQSTM1-201ENST00000360718 CAPZA1P52907 286 aa11.55□□□□□ -0.56
SQSTM1-201ENST00000360718 PCK2Q16822 640 aa11.55□□□□□ -0.56
SQSTM1-201ENST00000360718 FAM166AQ6J272 317 aa11.55□□□□□ -0.56
SQSTM1-201ENST00000360718 MUC20Q8N307 709 aaPredicted RBP11.55□□□□□ -0.56
SQSTM1-201ENST00000360718 OR2AJ1Q8NGZ0 328 aa11.55□□□□□ -0.56
SQSTM1-201ENST00000360718 TMEM45BQ96B21 275 aa11.55□□□□□ -0.56
SQSTM1-201ENST00000360718 SARAFQ96BY9 339 aa11.55□□□□□ -0.56
SQSTM1-201ENST00000360718 ABHD6Q9BV23 337 aa11.55□□□□□ -0.56
SQSTM1-201ENST00000360718 RBM24Q9BX46 236 aaKnown RBP11.55□□□□□ -0.56
SQSTM1-201ENST00000360718 FOXD3Q9UJU5 478 aaPredicted RBP11.55□□□□□ -0.56
SQSTM1-201ENST00000360718 TLN1Q9Y490 2541 aaKnown RBP11.55□□□□□ -0.56
SQSTM1-201ENST00000360718 FXYD6-FXYD2A0A087WZ82 144 aa11.55□□□□□ -0.56
SQSTM1-201ENST00000360718 A0A0A6YYH2 397 aa11.55□□□□□ -0.56
SQSTM1-201ENST00000360718 TMEM272A0A1B0GTI8 110 aa11.55□□□□□ -0.56
SQSTM1-201ENST00000360718 A6NJ64 397 aa11.55□□□□□ -0.56
SQSTM1-201ENST00000360718 DHHO43323 396 aa11.55□□□□□ -0.56
SQSTM1-201ENST00000360718 CRYABP02511 175 aaKnown RBP11.55□□□□□ -0.56
SQSTM1-201ENST00000360718 CD3DP04234 171 aa11.55□□□□□ -0.56
SQSTM1-201ENST00000360718 LPLP06858 475 aa11.55□□□□□ -0.56
SQSTM1-201ENST00000360718 ACSM4P0C7M7 580 aa11.55□□□□□ -0.56
SQSTM1-201ENST00000360718 FCGR2AP12318 317 aa11.55□□□□□ -0.56
SQSTM1-201ENST00000360718 ZNF35P13682 527 aa11.55□□□□□ -0.56
SQSTM1-201ENST00000360718 ZNF133P52736 654 aaPredicted RBP11.55□□□□□ -0.56
SQSTM1-201ENST00000360718 CXADRP78310 365 aa11.55□□□□□ -0.56
SQSTM1-201ENST00000360718 GUCA2AQ02747 115 aa11.55□□□□□ -0.56
SQSTM1-201ENST00000360718 RPUSD3Q6P087 351 aaKnown RBP11.55□□□□□ -0.56
SQSTM1-201ENST00000360718 TMEM65Q6PI78 240 aa11.55□□□□□ -0.56
SQSTM1-201ENST00000360718 DCXRQ7Z4W1 244 aa11.55□□□□□ -0.56
SQSTM1-201ENST00000360718 GABRG1Q8N1C3 465 aa11.55□□□□□ -0.56
SQSTM1-201ENST00000360718 OR6M1Q8NGM8 313 aa11.55□□□□□ -0.56
SQSTM1-201ENST00000360718 OR52N5Q8NH56 324 aa11.55□□□□□ -0.56
SQSTM1-201ENST00000360718 ARL6Q9H0F7 186 aa11.55□□□□□ -0.56
SQSTM1-201ENST00000360718 FXYD6Q9H0Q3 95 aa11.55□□□□□ -0.56
SQSTM1-201ENST00000360718 RNF122Q9H9V4 155 aa11.55□□□□□ -0.56
SQSTM1-201ENST00000360718 SDHAF2Q9NX18 166 aa11.55□□□□□ -0.56
SQSTM1-201ENST00000360718 ZNF107Q9UII5 783 aaPredicted RBP11.55□□□□□ -0.56
SQSTM1-201ENST00000360718 SLC22A13Q9Y226 551 aa11.55□□□□□ -0.56
SQSTM1-201ENST00000360718 SLC22A20A6NK97 555 aa11.54□□□□□ -0.56
SQSTM1-201ENST00000360718 ZNF724A8MTY0 619 aa11.54□□□□□ -0.56
SQSTM1-201ENST00000360718 RAB3DO95716 219 aa11.54□□□□□ -0.56
SQSTM1-201ENST00000360718 GABRA1P14867 456 aa11.54□□□□□ -0.56
SQSTM1-201ENST00000360718 FSTP19883 344 aa11.54□□□□□ -0.56
SQSTM1-201ENST00000360718 ZP3P21754 424 aa11.54□□□□□ -0.56
SQSTM1-201ENST00000360718 CDAP32320 146 aa11.54□□□□□ -0.56
SQSTM1-201ENST00000360718 GK2Q14410 553 aaPredicted RBP11.54□□□□□ -0.56
SQSTM1-201ENST00000360718 KCNMB1Q16558 191 aa11.54□□□□□ -0.56
SQSTM1-201ENST00000360718 SGCAQ16586 387 aa11.54□□□□□ -0.56
SQSTM1-201ENST00000360718 CLVS2Q5SYC1 327 aa11.54□□□□□ -0.56
SQSTM1-201ENST00000360718 RGS7BPQ6MZT1 257 aaPredicted RBP11.54□□□□□ -0.56
SQSTM1-201ENST00000360718 CATSPERDQ86XM0 798 aa11.54□□□□□ -0.56
SQSTM1-201ENST00000360718 LINC00346Q8IVM7 164 aa11.54□□□□□ -0.56
SQSTM1-201ENST00000360718 GALNT11Q8NCW6 608 aa11.54□□□□□ -0.56
SQSTM1-201ENST00000360718 OR8S1Q8NH09 359 aa11.54□□□□□ -0.56
SQSTM1-201ENST00000360718 ASB5Q8WWX0 329 aa11.54□□□□□ -0.56
SQSTM1-201ENST00000360718 PRDM14Q9GZV8 571 aa11.54□□□□□ -0.56
SQSTM1-201ENST00000360718 PPA2Q9H2U2 334 aa11.54□□□□□ -0.56
SQSTM1-201ENST00000360718 C1orf198Q9H425 327 aa11.54□□□□□ -0.56
SQSTM1-201ENST00000360718 ZNF175Q9Y473 711 aa11.54□□□□□ -0.56
SQSTM1-201ENST00000360718 A0A1B0GW55 424 aa11.53□□□□□ -0.56
SQSTM1-201ENST00000360718 KRBOX1C9JBD0 128 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms