RNA–Protein interactions for RNA: ENST00000358901.10

VCP-201, Transcript of valosin containing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCP, Length 4,370 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-201ENST00000358901 TMEM178AQ8NBL3 297 aa12.3□□□□□ -0.44
VCP-201ENST00000358901 CLRN3Q8NCR9 226 aa12.3□□□□□ -0.44
VCP-201ENST00000358901 RXFP4Q8TDU9 374 aa12.3□□□□□ -0.44
VCP-201ENST00000358901 RPH3ALQ9UNE2 315 aa12.3□□□□□ -0.44
VCP-201ENST00000358901 POLR2AP24928 1970 aaKnown RBP12.3□□□□□ -0.44
VCP-201ENST00000358901 ALG1L2C9J202 215 aa12.3□□□□□ -0.44
VCP-201ENST00000358901 PPP5D1E7EU14 171 aa12.3□□□□□ -0.44
VCP-201ENST00000358901 WNT11O96014 354 aa12.3□□□□□ -0.44
VCP-201ENST00000358901 HLA-DOBP13765 273 aa12.3□□□□□ -0.44
VCP-201ENST00000358901 NFYBP25208 207 aa12.3□□□□□ -0.44
VCP-201ENST00000358901 HTRA4P83105 476 aaPredicted RBP12.3□□□□□ -0.44
VCP-201ENST00000358901 CEACAM16Q2WEN9 425 aa12.3□□□□□ -0.44
VCP-201ENST00000358901 B3GNTL1Q67FW5 361 aaPredicted RBP12.3□□□□□ -0.44
VCP-201ENST00000358901 H2BFWTQ7Z2G1 175 aa12.3□□□□□ -0.44
VCP-201ENST00000358901 OR2W3Q7Z3T1 314 aa12.3□□□□□ -0.44
VCP-201ENST00000358901 THNSL2Q86YJ6 484 aa12.3□□□□□ -0.44
VCP-201ENST00000358901 NOXO1Q8NFA2 376 aa12.3□□□□□ -0.44
VCP-201ENST00000358901 ROBO4Q8WZ75 1007 aa12.3□□□□□ -0.44
VCP-201ENST00000358901 MENTQ9BUN1 341 aa12.3□□□□□ -0.44
VCP-201ENST00000358901 KCNK15Q9H427 330 aa12.3□□□□□ -0.44
VCP-201ENST00000358901 STRCP1A6NGW2 1772 aa12.3□□□□□ -0.44
VCP-201ENST00000358901 A0A1W2PPV9 198 aa12.3□□□□□ -0.44
VCP-201ENST00000358901 ANKRD20A5PA0PJZ0 165 aa12.3□□□□□ -0.44
VCP-201ENST00000358901 ZNF727A8MUV8 499 aa12.3□□□□□ -0.44
VCP-201ENST00000358901 TNFSF11O14788 317 aa12.3□□□□□ -0.44
VCP-201ENST00000358901 CST7O76096 145 aa12.3□□□□□ -0.44
VCP-201ENST00000358901 NME1P15531 152 aaKnown RBP12.3□□□□□ -0.44
VCP-201ENST00000358901 CLDN15P56746 228 aa12.3□□□□□ -0.44
VCP-201ENST00000358901 SLC25A30Q5SVS4 291 aa12.3□□□□□ -0.44
VCP-201ENST00000358901 ZNF626Q68DY1 528 aa12.3□□□□□ -0.44
VCP-201ENST00000358901 SPICQ8N5J4 248 aa12.3□□□□□ -0.44
VCP-201ENST00000358901 NANPQ8TBE9 248 aa12.3□□□□□ -0.44
VCP-201ENST00000358901 TGIF2Q9GZN2 237 aa12.3□□□□□ -0.44
VCP-201ENST00000358901 MED9Q9NWA0 146 aa12.3□□□□□ -0.44
VCP-201ENST00000358901 SIRPB1O00241 398 aa12.29□□□□□ -0.44
VCP-201ENST00000358901 OGG1O15527 345 aa12.29□□□□□ -0.44
VCP-201ENST00000358901 AQP8O94778 261 aa12.29□□□□□ -0.44
VCP-201ENST00000358901 RRADP55042 308 aa12.29□□□□□ -0.44
VCP-201ENST00000358901 PDCD1Q15116 288 aa12.29□□□□□ -0.44
VCP-201ENST00000358901 PNLIPRP3Q17RR3 467 aa12.29□□□□□ -0.44
VCP-201ENST00000358901 C1orf87Q8N0U7 546 aa12.29□□□□□ -0.44
VCP-201ENST00000358901 ZNF230Q9UIE0 474 aaPredicted RBP12.29□□□□□ -0.44
VCP-201ENST00000358901 STRAPQ9Y3F4 350 aaKnown RBP12.29□□□□□ -0.44
VCP-201ENST00000358901 CNOT1A5YKK6 2376 aaKnown RBP12.29□□□□□ -0.44
VCP-201ENST00000358901 C2CD4DB7Z1M9 353 aa12.29□□□□□ -0.44
VCP-201ENST00000358901 GLAP06280 429 aa12.29□□□□□ -0.44
VCP-201ENST00000358901 HOXD11P31277 338 aaPredicted RBP12.29□□□□□ -0.44
VCP-201ENST00000358901 KISS1Q15726 138 aa12.29□□□□□ -0.44
VCP-201ENST00000358901 CD226Q15762 336 aa12.29□□□□□ -0.44
VCP-201ENST00000358901 TMEM92Q6UXU6 159 aa12.29□□□□□ -0.44
VCP-201ENST00000358901 ZNF687Q8N1G0 1237 aa12.29□□□□□ -0.44
VCP-201ENST00000358901 OSR2Q8N2R0 312 aa12.29□□□□□ -0.44
VCP-201ENST00000358901 ZDHHC22Q8N966 263 aa12.29□□□□□ -0.44
VCP-201ENST00000358901 OR52N4Q8NGI2 321 aa12.29□□□□□ -0.44
VCP-201ENST00000358901 RTL8AQ9BWD3 113 aa12.29□□□□□ -0.44
VCP-201ENST00000358901 LRP5LA4QPB2 252 aa12.29□□□□□ -0.44
VCP-201ENST00000358901 RGS13O14921 159 aa12.29□□□□□ -0.44
VCP-201ENST00000358901 LANCL1O43813 399 aa12.29□□□□□ -0.44
VCP-201ENST00000358901 ZP3P21754 424 aa12.29□□□□□ -0.44
VCP-201ENST00000358901 PRAMEF5Q5TYX0 476 aa12.29□□□□□ -0.44
VCP-201ENST00000358901 PRAMEF6Q5VXH4 476 aa12.29□□□□□ -0.44
VCP-201ENST00000358901 DEGS2Q6QHC5 323 aa12.29□□□□□ -0.44
VCP-201ENST00000358901 BAGE3Q86Y29 109 aa12.29□□□□□ -0.44
VCP-201ENST00000358901 BAGE2Q86Y30 109 aa12.29□□□□□ -0.44
VCP-201ENST00000358901 GVQW1Q8N7I0 195 aa12.29□□□□□ -0.44
VCP-201ENST00000358901 OR10G3Q8NGC4 313 aa12.29□□□□□ -0.44
VCP-201ENST00000358901 GPBAR1Q8TDU6 330 aa12.29□□□□□ -0.44
VCP-201ENST00000358901 GNRHR2Q96P88 292 aa12.29□□□□□ -0.44
VCP-201ENST00000358901 C12orf57Q99622 126 aa12.29□□□□□ -0.44
VCP-201ENST00000358901 TWSG1Q9GZX9 223 aa12.29□□□□□ -0.44
VCP-201ENST00000358901 EML2O95834 649 aa12.28□□□□□ -0.44
VCP-201ENST00000358901 IAPPP10997 89 aa12.28□□□□□ -0.44
VCP-201ENST00000358901 CCL11P51671 97 aa12.28□□□□□ -0.44
VCP-201ENST00000358901 NAA40Q86UY6 237 aa12.28□□□□□ -0.44
VCP-201ENST00000358901 NPEPL1Q8NDH3 523 aa12.28□□□□□ -0.44
VCP-201ENST00000358901 AKR1E2Q96JD6 320 aa12.28□□□□□ -0.44
VCP-201ENST00000358901 UBE2ZQ9H832 354 aaPredicted RBP12.28□□□□□ -0.44
VCP-201ENST00000358901 POLDIP2Q9Y2S7 368 aa12.28□□□□□ -0.44
VCP-201ENST00000358901 ZNF250P15622 560 aa12.28□□□□□ -0.44
VCP-201ENST00000358901 HIST1H1DP16402 221 aaKnown RBP12.28□□□□□ -0.44
VCP-201ENST00000358901 OR11L1Q8NGX0 322 aa12.28□□□□□ -0.44
VCP-201ENST00000358901 OR1L3Q8NH93 324 aa12.28□□□□□ -0.44
VCP-201ENST00000358901 OR2AE1Q8NHA4 323 aa12.28□□□□□ -0.44
VCP-201ENST00000358901 RPUSD4Q96CM3 377 aaKnown RBP12.28□□□□□ -0.44
VCP-201ENST00000358901 DEFB127Q9H1M4 99 aa12.28□□□□□ -0.44
VCP-201ENST00000358901 CACNA1EQ15878 2313 aa12.28□□□□□ -0.44
VCP-201ENST00000358901 COL4A5P29400 1685 aa12.28□□□□□ -0.44
VCP-201ENST00000358901 H3BMH7 237 aa12.28□□□□□ -0.44
VCP-201ENST00000358901 CBR3O75828 277 aa12.28□□□□□ -0.44
VCP-201ENST00000358901 PIAS2O75928 621 aa12.28□□□□□ -0.44
VCP-201ENST00000358901 CSF2RBP32927 897 aa12.28□□□□□ -0.44
VCP-201ENST00000358901 C6orf15Q6UXA7 325 aaPredicted RBP12.28□□□□□ -0.44
VCP-201ENST00000358901 SSX9Q7RTT3 188 aa12.28□□□□□ -0.44
VCP-201ENST00000358901 PRRX2Q99811 253 aa12.28□□□□□ -0.44
VCP-201ENST00000358901 FOCADQ5VW36 1801 aa12.28□□□□□ -0.44
VCP-201ENST00000358901 PRSS44E7EML9 344 aa12.28□□□□□ -0.44
VCP-201ENST00000358901 HRKO00198 91 aa12.28□□□□□ -0.44
VCP-201ENST00000358901 CYB5BO43169 146 aa12.28□□□□□ -0.44
VCP-201ENST00000358901 RAB4AP20338 218 aa12.28□□□□□ -0.44
VCP-201ENST00000358901 GLRA1P23415 457 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms