RNA–Protein interactions for RNA: ENST00000356083.7

COL27A1-201, Transcript of collagen type XXVII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL27A1, Length 7,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-201ENST00000356083 SPCS2Q15005 226 aa15.64■□□□□ 0.09
COL27A1-201ENST00000356083 UBE2ZQ9H832 354 aaPredicted RBP15.64■□□□□ 0.09
COL27A1-201ENST00000356083 ZNF121P58317 390 aaPredicted RBP15.64■□□□□ 0.09
COL27A1-201ENST00000356083 OR52L2PQ8NGH6 319 aa15.64■□□□□ 0.09
COL27A1-201ENST00000356083 IL36GQ9NZH8 169 aa15.64■□□□□ 0.09
COL27A1-201ENST00000356083 PKDREJQ9NTG1 2253 aa15.63■□□□□ 0.09
COL27A1-201ENST00000356083 UBE2MP61081 183 aaKnown RBP15.63■□□□□ 0.09
COL27A1-201ENST00000356083 DHRS13Q6UX07 377 aa15.63■□□□□ 0.09
COL27A1-201ENST00000356083 RBM45Q8IUH3 476 aaKnown RBP15.63■□□□□ 0.09
COL27A1-201ENST00000356083 C20orf141Q9NUB4 165 aa15.63■□□□□ 0.09
COL27A1-201ENST00000356083 ACSM4P0C7M7 580 aa15.63■□□□□ 0.09
COL27A1-201ENST00000356083 CR2P20023 1033 aa15.63■□□□□ 0.09
COL27A1-201ENST00000356083 ZNF154Q13106 437 aa15.63■□□□□ 0.09
COL27A1-201ENST00000356083 ADGRG7Q96K78 797 aa15.63■□□□□ 0.09
COL27A1-201ENST00000356083 PLK5Q496M5 336 aa15.63■□□□□ 0.09
COL27A1-201ENST00000356083 NCR3LG1Q68D85 454 aa15.63■□□□□ 0.09
COL27A1-201ENST00000356083 TIMP4Q99727 224 aa15.63■□□□□ 0.09
COL27A1-201ENST00000356083 RHOFQ9HBH0 211 aa15.63■□□□□ 0.09
COL27A1-201ENST00000356083 MARCH5Q9NX47 278 aa15.63■□□□□ 0.09
COL27A1-201ENST00000356083 BET1LQ9NYM9 111 aa15.63■□□□□ 0.09
COL27A1-201ENST00000356083 RABAC1Q9UI14 185 aa15.63■□□□□ 0.09
COL27A1-201ENST00000356083 NID2Q14112 1375 aa15.63■□□□□ 0.09
COL27A1-201ENST00000356083 M0R3E3 92 aa15.63■□□□□ 0.09
COL27A1-201ENST00000356083 HOXC13P31276 330 aa15.63■□□□□ 0.09
COL27A1-201ENST00000356083 ZNF766Q5HY98 468 aa15.63■□□□□ 0.09
COL27A1-201ENST00000356083 CBARPQ8N350 705 aaPredicted RBP15.63■□□□□ 0.09
COL27A1-201ENST00000356083 MED29Q9NX70 200 aa15.63■□□□□ 0.09
COL27A1-201ENST00000356083 LHX3Q9UBR4 397 aa15.63■□□□□ 0.09
COL27A1-201ENST00000356083 SOD1P00441 154 aa15.63■□□□□ 0.09
COL27A1-201ENST00000356083 FNDC7Q5VTL7 733 aa15.63■□□□□ 0.09
COL27A1-201ENST00000356083 TM4SF18Q96CE8 201 aa15.63■□□□□ 0.09
COL27A1-201ENST00000356083 PRSS1P07477 247 aa15.63■□□□□ 0.09
COL27A1-201ENST00000356083 ZGLP1P0C6A0 271 aa15.63■□□□□ 0.09
COL27A1-201ENST00000356083 SLC35E2P0CK97 266 aa15.63■□□□□ 0.09
COL27A1-201ENST00000356083 RPS27P42677 84 aaKnown RBP15.63■□□□□ 0.09
COL27A1-201ENST00000356083 FAAP20Q6NZ36 180 aa15.63■□□□□ 0.09
COL27A1-201ENST00000356083 TMUB2Q71RG4 321 aa15.63■□□□□ 0.09
COL27A1-201ENST00000356083 VAMP8Q9BV40 100 aa15.63■□□□□ 0.09
COL27A1-201ENST00000356083 INPP5JQ15735 1006 aaPredicted RBP15.62■□□□□ 0.09
COL27A1-201ENST00000356083 IP6K3Q96PC2 410 aa15.62■□□□□ 0.09
COL27A1-201ENST00000356083 ADAT1Q9BUB4 502 aaKnown RBP15.62■□□□□ 0.09
COL27A1-201ENST00000356083 BOLA1Q9Y3E2 137 aa15.62■□□□□ 0.09
COL27A1-201ENST00000356083 R4GN57 208 aa15.62■□□□□ 0.09
COL27A1-201ENST00000356083 PMS2P2O95744 297 aa15.62■□□□□ 0.09
COL27A1-201ENST00000356083 TCRBP04435 133 aa15.62■□□□□ 0.09
COL27A1-201ENST00000356083 CAMPP49913 170 aa15.62■□□□□ 0.09
COL27A1-201ENST00000356083 RAB1AP62820 205 aa15.62■□□□□ 0.09
COL27A1-201ENST00000356083 C17orf99Q6UX52 265 aa15.62■□□□□ 0.09
COL27A1-201ENST00000356083 TMUB1Q9BVT8 246 aa15.62■□□□□ 0.09
COL27A1-201ENST00000356083 LYZL6O75951 148 aa15.62■□□□□ 0.09
COL27A1-201ENST00000356083 HIST1H1CP16403 213 aaKnown RBP15.62■□□□□ 0.09
COL27A1-201ENST00000356083 BTG2P78543 158 aa15.62■□□□□ 0.09
COL27A1-201ENST00000356083 TEX261Q6UWH6 196 aa15.62■□□□□ 0.09
COL27A1-201ENST00000356083 OR2L13Q8N349 312 aa15.62■□□□□ 0.09
COL27A1-201ENST00000356083 CHODLQ9H9P2 273 aa15.62■□□□□ 0.09
COL27A1-201ENST00000356083 IGKV3OR2-268A0A0C4DH90 116 aa15.62■□□□□ 0.09
COL27A1-201ENST00000356083 HTR1DP28221 377 aa15.62■□□□□ 0.09
COL27A1-201ENST00000356083 MORN1Q5T089 497 aa15.62■□□□□ 0.09
COL27A1-201ENST00000356083 CALHM3Q86XJ0 350 aa15.62■□□□□ 0.09
COL27A1-201ENST00000356083 GRAMD2BQ96HH9 432 aa15.62■□□□□ 0.09
COL27A1-201ENST00000356083 LTB4R2Q9NPC1 389 aa15.62■□□□□ 0.09
COL27A1-201ENST00000356083 MYO5AQ9Y4I1 1855 aaKnown RBP15.62■□□□□ 0.09
COL27A1-201ENST00000356083 POM121BA6NF01 834 aa15.62■□□□□ 0.09
COL27A1-201ENST00000356083 CST7O76096 145 aa15.62■□□□□ 0.09
COL27A1-201ENST00000356083 NME1P15531 152 aaKnown RBP15.62■□□□□ 0.09
COL27A1-201ENST00000356083 SPINK2P20155 84 aa15.62■□□□□ 0.09
COL27A1-201ENST00000356083 DAPP51397 102 aa15.62■□□□□ 0.09
COL27A1-201ENST00000356083 TRMT12Q53H54 448 aaKnown RBP15.62■□□□□ 0.09
COL27A1-201ENST00000356083 FFAR4Q5NUL3 377 aa15.62■□□□□ 0.09
COL27A1-201ENST00000356083 ATP1B1P05026 303 aa15.62■□□□□ 0.09
COL27A1-201ENST00000356083 CSN3P07498 182 aa15.62■□□□□ 0.09
COL27A1-201ENST00000356083 CBLL1Q75N03 491 aa15.62■□□□□ 0.09
COL27A1-201ENST00000356083 EDARADDQ8WWZ3 215 aa15.62■□□□□ 0.09
COL27A1-201ENST00000356083 TXLNGYQ9BZA5 131 aa15.62■□□□□ 0.09
COL27A1-201ENST00000356083 CEACAM6P40199 344 aa15.61■□□□□ 0.09
COL27A1-201ENST00000356083 ETV6P41212 452 aa15.61■□□□□ 0.09
COL27A1-201ENST00000356083 TMEM116Q8NCL8 245 aa15.61■□□□□ 0.09
COL27A1-201ENST00000356083 RFESDQ8TAC1 157 aa15.61■□□□□ 0.09
COL27A1-201ENST00000356083 SHISA8B8ZZ34 492 aa15.61■□□□□ 0.09
COL27A1-201ENST00000356083 XKR7Q5GH72 579 aa15.61■□□□□ 0.09
COL27A1-201ENST00000356083 LFNGQ8NES3 379 aa15.61■□□□□ 0.09
COL27A1-201ENST00000356083 PRDM14Q9GZV8 571 aa15.61■□□□□ 0.09
COL27A1-201ENST00000356083 PARD6AQ9NPB6 346 aa15.61■□□□□ 0.09
COL27A1-201ENST00000356083 PLAUP00749 431 aa15.61■□□□□ 0.09
COL27A1-201ENST00000356083 MT-ATP6P00846 226 aa15.61■□□□□ 0.09
COL27A1-201ENST00000356083 C11orf91Q3C1V1 193 aa15.61■□□□□ 0.09
COL27A1-201ENST00000356083 Q3ZCU0 254 aa15.61■□□□□ 0.09
COL27A1-201ENST00000356083 OR5AP2Q8NGF4 316 aa15.61■□□□□ 0.09
COL27A1-201ENST00000356083 C7orf43Q8WVR3 580 aa15.61■□□□□ 0.09
COL27A1-201ENST00000356083 CLDN23Q96B33 292 aa15.61■□□□□ 0.09
COL27A1-201ENST00000356083 LOC107986453A0A1B0GWG9 222 aa15.61■□□□□ 0.09
COL27A1-201ENST00000356083 AGFG2O95081 481 aa15.61■□□□□ 0.09
COL27A1-201ENST00000356083 CST9Q5W186 159 aa15.61■□□□□ 0.09
COL27A1-201ENST00000356083 FOXC2Q99958 501 aa15.61■□□□□ 0.09
COL27A1-201ENST00000356083 TAAR3PQ9P1P4 343 aa15.61■□□□□ 0.09
COL27A1-201ENST00000356083 CHST2Q9Y4C5 530 aa15.61■□□□□ 0.09
COL27A1-201ENST00000356083 PHF3Q92576 2039 aaKnown RBP15.61■□□□□ 0.09
COL27A1-201ENST00000356083 VMA21Q3ZAQ7 101 aa15.61■□□□□ 0.09
COL27A1-201ENST00000356083 MFSD4AQ8N468 514 aa15.61■□□□□ 0.09
COL27A1-201ENST00000356083 LINC00469Q8N7U9 141 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms