RNA–Protein interactions for RNA: ENST00000355480.9

COL18A1-202, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL18A1, Length 5,924 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-202ENST00000355480 IGHV1OR15-9A0A0B4J2B8 117 aa16.19■□□□□ 0.18
COL18A1-202ENST00000355480 ST8SIA5O15466 376 aa16.19■□□□□ 0.18
COL18A1-202ENST00000355480 CYC1P08574 325 aa16.19■□□□□ 0.18
COL18A1-202ENST00000355480 NECAP1Q8NC96 275 aa16.19■□□□□ 0.18
COL18A1-202ENST00000355480 MYOZ1Q9NP98 299 aaPredicted RBP16.19■□□□□ 0.18
COL18A1-202ENST00000355480 SLC35D1Q9NTN3 355 aa16.19■□□□□ 0.18
COL18A1-202ENST00000355480 CACFD1Q9UGQ2 172 aa16.19■□□□□ 0.18
COL18A1-202ENST00000355480 ZNF727A8MUV8 499 aa16.18■□□□□ 0.18
COL18A1-202ENST00000355480 ZNF787Q6DD87 383 aa16.18■□□□□ 0.18
COL18A1-202ENST00000355480 ARHGEF39Q8N4T4 335 aa16.18■□□□□ 0.18
COL18A1-202ENST00000355480 OR2I1PQ8NGU4 316 aa16.18■□□□□ 0.18
COL18A1-202ENST00000355480 ACY3Q96HD9 319 aa16.18■□□□□ 0.18
COL18A1-202ENST00000355480 CTSVO60911 334 aa16.18■□□□□ 0.18
COL18A1-202ENST00000355480 SDHBP21912 280 aa16.18■□□□□ 0.18
COL18A1-202ENST00000355480 EPHA8P29322 1005 aaPredicted RBP16.18■□□□□ 0.18
COL18A1-202ENST00000355480 EVX1P49640 407 aa16.18■□□□□ 0.18
COL18A1-202ENST00000355480 GNG3P63215 75 aa16.18■□□□□ 0.18
COL18A1-202ENST00000355480 VMA21Q3ZAQ7 101 aa16.18■□□□□ 0.18
COL18A1-202ENST00000355480 DUS3LQ96G46 650 aaKnown RBP16.18■□□□□ 0.18
COL18A1-202ENST00000355480 C1QBP02746 253 aa16.18■□□□□ 0.18
COL18A1-202ENST00000355480 PDGFAP04085 211 aa16.18■□□□□ 0.18
COL18A1-202ENST00000355480 TOMM34Q15785 309 aaPredicted RBP16.18■□□□□ 0.18
COL18A1-202ENST00000355480 OR4Q3Q8NH05 313 aa16.18■□□□□ 0.18
COL18A1-202ENST00000355480 POM121L2Q96KW2 1035 aa16.18■□□□□ 0.18
COL18A1-202ENST00000355480 PLCH1Q4KWH8 1693 aa16.18■□□□□ 0.18
COL18A1-202ENST00000355480 CLEC18AA5D8T8 446 aa16.18■□□□□ 0.18
COL18A1-202ENST00000355480 SERPINE3A8MV23 424 aa16.18■□□□□ 0.18
COL18A1-202ENST00000355480 UMAD1C9J7I0 102 aa16.18■□□□□ 0.18
COL18A1-202ENST00000355480 PPIHO43447 177 aaKnown RBP16.18■□□□□ 0.18
COL18A1-202ENST00000355480 GABRB1P18505 474 aa16.18■□□□□ 0.18
COL18A1-202ENST00000355480 EXOSC2Q13868 293 aaKnown RBP16.18■□□□□ 0.18
COL18A1-202ENST00000355480 OR2T2Q6IF00 324 aa16.18■□□□□ 0.18
COL18A1-202ENST00000355480 CLEC18CQ8NCF0 446 aa16.18■□□□□ 0.18
COL18A1-202ENST00000355480 C2orf50Q96LR7 162 aa16.18■□□□□ 0.18
COL18A1-202ENST00000355480 MMP25Q9NPA2 562 aa16.18■□□□□ 0.18
COL18A1-202ENST00000355480 CISD3P0C7P0 127 aa16.18■□□□□ 0.18
COL18A1-202ENST00000355480 ADAM5Q6NVV9 412 aa16.18■□□□□ 0.18
COL18A1-202ENST00000355480 ZNF793Q6ZN11 406 aa16.18■□□□□ 0.18
COL18A1-202ENST00000355480 SLC38A6Q8IZM9 456 aa16.18■□□□□ 0.18
COL18A1-202ENST00000355480 CMTM3Q96MX0 182 aa16.18■□□□□ 0.18
COL18A1-202ENST00000355480 DERL3Q96Q80 235 aa16.18■□□□□ 0.18
COL18A1-202ENST00000355480 OR8B4Q96RC9 309 aa16.18■□□□□ 0.18
COL18A1-202ENST00000355480 PLEKHB1Q9UF11 243 aaPredicted RBP16.18■□□□□ 0.18
COL18A1-202ENST00000355480 CDC14BO60729 498 aa16.17■□□□□ 0.18
COL18A1-202ENST00000355480 NKX2-2O95096 273 aa16.17■□□□□ 0.18
COL18A1-202ENST00000355480 DCTDP32321 178 aa16.17■□□□□ 0.18
COL18A1-202ENST00000355480 PCBP3P57721 371 aaKnown RBP16.17■□□□□ 0.18
COL18A1-202ENST00000355480 OR4S1Q8NGB4 309 aa16.17■□□□□ 0.18
COL18A1-202ENST00000355480 ZNF71Q9NQZ8 489 aaPredicted RBP16.17■□□□□ 0.18
COL18A1-202ENST00000355480 M0R1X1 148 aa16.17■□□□□ 0.18
COL18A1-202ENST00000355480 OR2C1O95371 312 aa16.17■□□□□ 0.18
COL18A1-202ENST00000355480 PMP22Q01453 160 aa16.17■□□□□ 0.18
COL18A1-202ENST00000355480 KIAA0141Q14154 515 aaPredicted RBP16.17■□□□□ 0.18
COL18A1-202ENST00000355480 HES3Q5TGS1 186 aa16.17■□□□□ 0.18
COL18A1-202ENST00000355480 Q8IYB0 196 aa16.17■□□□□ 0.18
COL18A1-202ENST00000355480 DHRS9Q9BPW9 319 aa16.17■□□□□ 0.18
COL18A1-202ENST00000355480 FOXJ3Q9UPW0 622 aa16.17■□□□□ 0.18
COL18A1-202ENST00000355480 A0A0B4J2E0 115 aa16.17■□□□□ 0.18
COL18A1-202ENST00000355480 A0A1B0GX12 115 aa16.17■□□□□ 0.18
COL18A1-202ENST00000355480 COL9A1P20849 921 aa16.17■□□□□ 0.18
COL18A1-202ENST00000355480 PXDC1Q5TGL8 231 aa16.17■□□□□ 0.18
COL18A1-202ENST00000355480 UBE3DQ7Z6J8 389 aa16.17■□□□□ 0.18
COL18A1-202ENST00000355480 LYG2Q86SG7 212 aa16.17■□□□□ 0.18
COL18A1-202ENST00000355480 GPBAR1Q8TDU6 330 aa16.17■□□□□ 0.18
COL18A1-202ENST00000355480 FUT3P21217 361 aa16.17■□□□□ 0.18
COL18A1-202ENST00000355480 CD80P33681 288 aa16.17■□□□□ 0.18
COL18A1-202ENST00000355480 GNG10P50151 68 aa16.17■□□□□ 0.18
COL18A1-202ENST00000355480 FZD5Q13467 585 aa16.17■□□□□ 0.18
COL18A1-202ENST00000355480 PNLIPRP3Q17RR3 467 aa16.17■□□□□ 0.18
COL18A1-202ENST00000355480 PRR27Q6MZM9 219 aa16.17■□□□□ 0.18
COL18A1-202ENST00000355480 HES4Q9HCC6 221 aa16.17■□□□□ 0.18
COL18A1-202ENST00000355480 MRPL22Q9NWU5 206 aaKnown RBP16.17■□□□□ 0.18
COL18A1-202ENST00000355480 FUCA1P04066 466 aa16.17■□□□□ 0.18
COL18A1-202ENST00000355480 MRGPRX3Q96LB0 322 aa16.17■□□□□ 0.18
COL18A1-202ENST00000355480 ZNF416Q9BWM5 594 aa16.17■□□□□ 0.18
COL18A1-202ENST00000355480 ZFP64Q9NPA5 681 aa16.17■□□□□ 0.18
COL18A1-202ENST00000355480 DCTN6O00399 190 aa16.16■□□□□ 0.18
COL18A1-202ENST00000355480 PEX11BO96011 259 aa16.16■□□□□ 0.18
COL18A1-202ENST00000355480 HPP00738 406 aa16.16■□□□□ 0.18
COL18A1-202ENST00000355480 EPXP11678 715 aa16.16■□□□□ 0.18
COL18A1-202ENST00000355480 FGF7P21781 194 aa16.16■□□□□ 0.18
COL18A1-202ENST00000355480 NXPH1P58417 271 aa16.16■□□□□ 0.18
COL18A1-202ENST00000355480 FMODQ06828 376 aa16.16■□□□□ 0.18
COL18A1-202ENST00000355480 SLC25A35Q3KQZ1 300 aa16.16■□□□□ 0.18
COL18A1-202ENST00000355480 LINC00299Q6ZSB3 139 aa16.16■□□□□ 0.18
COL18A1-202ENST00000355480 CLCF1Q9UBD9 225 aa16.16■□□□□ 0.18
COL18A1-202ENST00000355480 A0A1B0GUL6 1792 aa16.16■□□□□ 0.18
COL18A1-202ENST00000355480 AQP8O94778 261 aa16.16■□□□□ 0.18
COL18A1-202ENST00000355480 TXNDC12O95881 172 aa16.16■□□□□ 0.18
COL18A1-202ENST00000355480 TRAPPC2P0DI81 140 aa16.16■□□□□ 0.18
COL18A1-202ENST00000355480 TRAPPC2BP0DI82 140 aa16.16■□□□□ 0.18
COL18A1-202ENST00000355480 GPNMBQ14956 572 aa16.16■□□□□ 0.18
COL18A1-202ENST00000355480 HFEQ30201 348 aa16.16■□□□□ 0.18
COL18A1-202ENST00000355480 OR4C3Q8NH37 302 aa16.16■□□□□ 0.18
COL18A1-202ENST00000355480 M1APQ8TC57 530 aa16.16■□□□□ 0.18
COL18A1-202ENST00000355480 H3BMH7 237 aa16.16■□□□□ 0.18
COL18A1-202ENST00000355480 AKR1C3P42330 323 aa16.16■□□□□ 0.18
COL18A1-202ENST00000355480 MLF1P58340 268 aa16.16■□□□□ 0.18
COL18A1-202ENST00000355480 Q6ZNX1 250 aa16.16■□□□□ 0.18
COL18A1-202ENST00000355480 PRSS41Q7RTY9 318 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms