RNA–Protein interactions for RNA: ENST00000355354.11

CD47-201, Transcript of CD47 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD47, Length 5,020 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-201ENST00000355354 DECR1Q16698 335 aa4.82□□□□□ -1.64
CD47-201ENST00000355354 HIST2H2AA3Q6FI13 130 aa4.82□□□□□ -1.64
CD47-201ENST00000355354 COMMD7Q86VX2 200 aa4.82□□□□□ -1.64
CD47-201ENST00000355354 CPEB3Q8NE35 698 aaKnown RBP4.82□□□□□ -1.64
CD47-201ENST00000355354 OR51E1Q8TCB6 317 aa4.82□□□□□ -1.64
CD47-201ENST00000355354 LUZP4Q9P127 313 aa4.82□□□□□ -1.64
CD47-201ENST00000355354 SHPKQ9UHJ6 478 aa4.82□□□□□ -1.64
CD47-201ENST00000355354 SSR3Q9UNL2 185 aa4.82□□□□□ -1.64
CD47-201ENST00000355354 VWC2LB2RUY7 222 aa4.82□□□□□ -1.64
CD47-201ENST00000355354 SHOXO15266 292 aa4.82□□□□□ -1.64
CD47-201ENST00000355354 PPIHO43447 177 aaKnown RBP4.82□□□□□ -1.64
CD47-201ENST00000355354 IGKV1-39P01597 117 aa4.82□□□□□ -1.64
CD47-201ENST00000355354 IGKV1D-39P04432 117 aa4.82□□□□□ -1.64
CD47-201ENST00000355354 TPOP07202 933 aa4.82□□□□□ -1.64
CD47-201ENST00000355354 PSMB1P20618 241 aaKnown RBP4.82□□□□□ -1.64
CD47-201ENST00000355354 TDGF1P3P51864 188 aa4.82□□□□□ -1.64
CD47-201ENST00000355354 GNB2P62879 340 aa4.82□□□□□ -1.64
CD47-201ENST00000355354 RAB32Q13637 225 aa4.82□□□□□ -1.64
CD47-201ENST00000355354 AKIRIN2Q53H80 203 aa4.82□□□□□ -1.64
CD47-201ENST00000355354 ACER2Q5QJU3 275 aa4.82□□□□□ -1.64
CD47-201ENST00000355354 OR2W3Q7Z3T1 314 aa4.82□□□□□ -1.64
CD47-201ENST00000355354 ERASQ7Z444 233 aa4.82□□□□□ -1.64
CD47-201ENST00000355354 LYZL2Q7Z4W2 148 aa4.82□□□□□ -1.64
CD47-201ENST00000355354 BPIFB2Q8N4F0 458 aa4.82□□□□□ -1.64
CD47-201ENST00000355354 OR14A16Q8NHC5 309 aa4.82□□□□□ -1.64
CD47-201ENST00000355354 FOLH1BQ9HBA9 442 aa4.82□□□□□ -1.64
CD47-201ENST00000355354 CLN6Q9NWW5 311 aa4.82□□□□□ -1.64
CD47-201ENST00000355354 METRNQ9UJH8 293 aa4.82□□□□□ -1.64
CD47-201ENST00000355354 TINAGQ9UJW2 476 aa4.82□□□□□ -1.64
CD47-201ENST00000355354 HSF4Q9ULV5 492 aa4.82□□□□□ -1.64
CD47-201ENST00000355354 HIF3AQ9Y2N7 669 aa4.82□□□□□ -1.64
CD47-201ENST00000355354 RNF115Q9Y4L5 304 aa4.82□□□□□ -1.64
CD47-201ENST00000355354 GGT3PA6NGU5 568 aa4.82□□□□□ -1.64
CD47-201ENST00000355354 EFCAB7A8K855 629 aa4.82□□□□□ -1.64
CD47-201ENST00000355354 E7EUB6 86 aa4.82□□□□□ -1.64
CD47-201ENST00000355354 J3QKU1 62 aa4.82□□□□□ -1.64
CD47-201ENST00000355354 UGDHO60701 494 aa4.82□□□□□ -1.64
CD47-201ENST00000355354 AQP8O94778 261 aa4.82□□□□□ -1.64
CD47-201ENST00000355354 THBS4P35443 961 aa4.82□□□□□ -1.64
CD47-201ENST00000355354 DIO1P49895 249 aa4.82□□□□□ -1.64
CD47-201ENST00000355354 CDC42P60953 191 aa4.82□□□□□ -1.64
CD47-201ENST00000355354 ARHGAP11BQ3KRB8 267 aa4.82□□□□□ -1.64
CD47-201ENST00000355354 TIMM50Q3ZCQ8 353 aa4.82□□□□□ -1.64
CD47-201ENST00000355354 NUFIP2Q7Z417 695 aaKnown RBP4.82□□□□□ -1.64
CD47-201ENST00000355354 ZNF584Q8IVC4 421 aa4.82□□□□□ -1.64
CD47-201ENST00000355354 LRRC18Q8N456 261 aa4.82□□□□□ -1.64
CD47-201ENST00000355354 LILRB1Q8NHL6 650 aaPredicted RBP4.82□□□□□ -1.64
CD47-201ENST00000355354 THAP6Q8TBB0 222 aa4.82□□□□□ -1.64
CD47-201ENST00000355354 RNF128Q8TEB7 428 aa4.82□□□□□ -1.64
CD47-201ENST00000355354 ABHD5Q8WTS1 349 aa4.82□□□□□ -1.64
CD47-201ENST00000355354 PPP1R2P1Q96PQ5 205 aa4.82□□□□□ -1.64
CD47-201ENST00000355354 C7orf50Q9BRJ6 194 aaKnown RBP4.82□□□□□ -1.64
CD47-201ENST00000355354 MCRIP2Q9BUT9 160 aaKnown RBP4.82□□□□□ -1.64
CD47-201ENST00000355354 OR10A5Q9H207 317 aa4.82□□□□□ -1.64
CD47-201ENST00000355354 TMPRSS5Q9H3S3 457 aa4.82□□□□□ -1.64
CD47-201ENST00000355354 SAV1Q9H4B6 383 aaPredicted RBP4.82□□□□□ -1.64
CD47-201ENST00000355354 ACSS1Q9NUB1 689 aaPredicted RBP4.82□□□□□ -1.64
CD47-201ENST00000355354 IGKV3D-11A0A0A0MRZ8 115 aa4.82□□□□□ -1.64
CD47-201ENST00000355354 TYW5A2RUC4 315 aaKnown RBP4.82□□□□□ -1.64
CD47-201ENST00000355354 LINC00862A6NCI5 91 aa4.82□□□□□ -1.64
CD47-201ENST00000355354 OR5K4A6NMS3 321 aa4.82□□□□□ -1.64
CD47-201ENST00000355354 EEF1E1-BLOC1S5C9J1V9 151 aa4.82□□□□□ -1.64
CD47-201ENST00000355354 TRAF3IP2O43734 574 aaPredicted RBP4.82□□□□□ -1.64
CD47-201ENST00000355354 KLF7O75840 302 aaPredicted RBP4.82□□□□□ -1.64
CD47-201ENST00000355354 CCL3P10147 92 aa4.82□□□□□ -1.64
CD47-201ENST00000355354 LIFP15018 202 aa4.82□□□□□ -1.64
CD47-201ENST00000355354 ZNF20P17024 532 aa4.82□□□□□ -1.64
CD47-201ENST00000355354 PTGFRP43088 359 aa4.82□□□□□ -1.64
CD47-201ENST00000355354 RIPPLY1Q0D2K3 151 aa4.82□□□□□ -1.64
CD47-201ENST00000355354 CASP12Q6UXS9 341 aa4.82□□□□□ -1.64
CD47-201ENST00000355354 BEND4Q6ZU67 534 aa4.82□□□□□ -1.64
CD47-201ENST00000355354 PGAP1Q75T13 922 aa4.82□□□□□ -1.64
CD47-201ENST00000355354 DCXRQ7Z4W1 244 aa4.82□□□□□ -1.64
CD47-201ENST00000355354 Q8N7P7 452 aa4.82□□□□□ -1.64
CD47-201ENST00000355354 OR5AP2Q8NGF4 316 aa4.82□□□□□ -1.64
CD47-201ENST00000355354 ABHD3Q8WU67 409 aa4.82□□□□□ -1.64
CD47-201ENST00000355354 ZNF501Q96CX3 271 aaPredicted RBP4.82□□□□□ -1.64
CD47-201ENST00000355354 B3GNT2Q9NY97 397 aa4.82□□□□□ -1.64
CD47-201ENST00000355354 TEKT2Q9UIF3 430 aa4.82□□□□□ -1.64
CD47-201ENST00000355354 ACSL5Q9ULC5 683 aa4.82□□□□□ -1.64
CD47-201ENST00000355354 URGCP-MRPS24S4R325 110 aa4.82□□□□□ -1.64
CD47-201ENST00000355354 OR8U8P0C7N1 319 aa4.81□□□□□ -1.64
CD47-201ENST00000355354 MLF1P58340 268 aa4.81□□□□□ -1.64
CD47-201ENST00000355354 DEFA1P59665 94 aa4.81□□□□□ -1.64
CD47-201ENST00000355354 SCN1BQ07699 218 aa4.81□□□□□ -1.64
CD47-201ENST00000355354 SHEQ5VZ18 495 aa4.81□□□□□ -1.64
CD47-201ENST00000355354 KBTBD8Q8NFY9 601 aa4.81□□□□□ -1.64
CD47-201ENST00000355354 ATG101Q9BSB4 218 aa4.81□□□□□ -1.64
CD47-201ENST00000355354 ACTRT3Q9BYD9 372 aa4.81□□□□□ -1.64
CD47-201ENST00000355354 ZNF436Q9C0F3 470 aaPredicted RBP4.81□□□□□ -1.64
CD47-201ENST00000355354 COA4Q9NYJ1 87 aa4.81□□□□□ -1.64
CD47-201ENST00000355354 ADAM30Q9UKF2 790 aa4.81□□□□□ -1.64
CD47-201ENST00000355354 MRPS28Q9Y2Q9 187 aaKnown RBP4.81□□□□□ -1.64
CD47-201ENST00000355354 C17orf113A0A1B0GUU1 675 aa4.81□□□□□ -1.64
CD47-201ENST00000355354 HCRTR2O43614 444 aa4.81□□□□□ -1.64
CD47-201ENST00000355354 GLSO94925 669 aaPredicted RBP4.81□□□□□ -1.64
CD47-201ENST00000355354 CSTAP01040 98 aa4.81□□□□□ -1.64
CD47-201ENST00000355354 ZNF708P17019 499 aa4.81□□□□□ -1.64
CD47-201ENST00000355354 CSNK2A2P19784 350 aaPredicted RBP4.81□□□□□ -1.64
CD47-201ENST00000355354 SPINK9Q5DT21 86 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms