RNA–Protein interactions for RNA: ENST00000354098.7

SHMT1-203, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 1 (best) BASIC

Gene SHMT1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-203ENST00000354098 ART1P52961 327 aa18.81■□□□□ 0.6
SHMT1-203ENST00000354098 TNFAIP6P98066 277 aaPredicted RBP18.81■□□□□ 0.6
SHMT1-203ENST00000354098 RIPPLY1Q0D2K3 151 aa18.81■□□□□ 0.6
SHMT1-203ENST00000354098 SPHARQ15513 63 aa18.81■□□□□ 0.6
SHMT1-203ENST00000354098 PCGF3Q3KNV8 242 aa18.81■□□□□ 0.6
SHMT1-203ENST00000354098 PIGCQ92535 297 aa18.81■□□□□ 0.6
SHMT1-203ENST00000354098 FOXC2Q99958 501 aa18.81■□□□□ 0.6
SHMT1-203ENST00000354098 PAPOLGQ9BWT3 736 aaKnown RBP18.81■□□□□ 0.6
SHMT1-203ENST00000354098 DECR2Q9NUI1 292 aa18.81■□□□□ 0.6
SHMT1-203ENST00000354098 LRCH1Q9Y2L9 728 aa18.81■□□□□ 0.6
SHMT1-203ENST00000354098 IGHV3-64DA0A0J9YX35 117 aa18.8■□□□□ 0.6
SHMT1-203ENST00000354098 TMEM212A6NML5 194 aa18.8■□□□□ 0.6
SHMT1-203ENST00000354098 LYNX1G3V0Z9 82 aa18.8■□□□□ 0.6
SHMT1-203ENST00000354098 TPD52L2O43399 206 aaKnown RBP18.8■□□□□ 0.6
SHMT1-203ENST00000354098 LYNX1P0DP58 116 aa18.8■□□□□ 0.6
SHMT1-203ENST00000354098 SLC3A1Q07837 685 aa18.8■□□□□ 0.6
SHMT1-203ENST00000354098 HNRNPA0Q13151 305 aaKnown RBP18.8■□□□□ 0.6
SHMT1-203ENST00000354098 OR8G1Q15617 311 aa18.8■□□□□ 0.6
SHMT1-203ENST00000354098 DMRTC1Q5HYR2 192 aa18.8■□□□□ 0.6
SHMT1-203ENST00000354098 FAM209AQ5JX71 171 aa18.8■□□□□ 0.6
SHMT1-203ENST00000354098 DMKNQ6E0U4 476 aaPredicted RBP18.8■□□□□ 0.6
SHMT1-203ENST00000354098 DIRC2Q96SL1 478 aa18.8■□□□□ 0.6
SHMT1-203ENST00000354098 ADAT1Q9BUB4 502 aaKnown RBP18.8■□□□□ 0.6
SHMT1-203ENST00000354098 CCDC168Q8NDH2 2452 aa18.8■□□□□ 0.6
SHMT1-203ENST00000354098 ARID1AO14497 2285 aa18.8■□□□□ 0.6
SHMT1-203ENST00000354098 ZNF850A8MQ14 1090 aa18.79■□□□□ 0.6
SHMT1-203ENST00000354098 CD55P08174 381 aa18.79■□□□□ 0.6
SHMT1-203ENST00000354098 RBMXP38159 391 aaKnown RBP18.79■□□□□ 0.6
SHMT1-203ENST00000354098 PRDX4Q13162 271 aa18.79■□□□□ 0.6
SHMT1-203ENST00000354098 MAB21L1Q13394 359 aa18.79■□□□□ 0.6
SHMT1-203ENST00000354098 KRTAP1-3Q8IUG1 177 aa18.79■□□□□ 0.6
SHMT1-203ENST00000354098 RGP1Q92546 391 aaPredicted RBP18.79■□□□□ 0.6
SHMT1-203ENST00000354098 SMIM19Q96E16 107 aa18.79■□□□□ 0.6
SHMT1-203ENST00000354098 OR2V2Q96R30 315 aa18.79■□□□□ 0.6
SHMT1-203ENST00000354098 SLC22A4Q9H015 551 aa18.79■□□□□ 0.6
SHMT1-203ENST00000354098 COMMD4Q9H0A8 199 aa18.79■□□□□ 0.6
SHMT1-203ENST00000354098 SAP30LQ9HAJ7 183 aa18.79■□□□□ 0.6
SHMT1-203ENST00000354098 HHLA2Q9UM44 414 aa18.79■□□□□ 0.6
SHMT1-203ENST00000354098 VPS13CQ709C8 3753 aa18.79■□□□□ 0.6
SHMT1-203ENST00000354098 ZNF816-ZNF321PA0A0X1KG74 233 aa18.79■□□□□ 0.6
SHMT1-203ENST00000354098 GMDSO60547 372 aa18.79■□□□□ 0.6
SHMT1-203ENST00000354098 CST4P01036 141 aa18.79■□□□□ 0.6
SHMT1-203ENST00000354098 DAOP14920 347 aa18.79■□□□□ 0.6
SHMT1-203ENST00000354098 ACHEP22303 614 aa18.79■□□□□ 0.6
SHMT1-203ENST00000354098 COL8A2P25067 703 aa18.79■□□□□ 0.6
SHMT1-203ENST00000354098 CHN2P52757 468 aa18.79■□□□□ 0.6
SHMT1-203ENST00000354098 EMX1Q04741 257 aaPredicted RBP18.79■□□□□ 0.6
SHMT1-203ENST00000354098 SPARTQ8N0X7 666 aa18.79■□□□□ 0.6
SHMT1-203ENST00000354098 FTMTQ8N4E7 242 aa18.79■□□□□ 0.6
SHMT1-203ENST00000354098 ZNF525Q8N782 197 aa18.79■□□□□ 0.6
SHMT1-203ENST00000354098 ITLN1Q8WWA0 313 aa18.79■□□□□ 0.6
SHMT1-203ENST00000354098 GHSRQ92847 366 aa18.79■□□□□ 0.6
SHMT1-203ENST00000354098 BARX1Q9HBU1 254 aaPredicted RBP18.79■□□□□ 0.6
SHMT1-203ENST00000354098 TREM2Q9NZC2 230 aa18.79■□□□□ 0.6
SHMT1-203ENST00000354098 IL19Q9UHD0 177 aa18.79■□□□□ 0.6
SHMT1-203ENST00000354098 TEX15Q9BXT5 2789 aa18.78■□□□□ 0.6
SHMT1-203ENST00000354098 TRIM64A6NGJ6 449 aa18.78■□□□□ 0.6
SHMT1-203ENST00000354098 CDC14BO60729 498 aa18.78■□□□□ 0.6
SHMT1-203ENST00000354098 CELP19835 753 aa18.78■□□□□ 0.6
SHMT1-203ENST00000354098 TNFSF4P23510 183 aa18.78■□□□□ 0.6
SHMT1-203ENST00000354098 GNALP38405 381 aa18.78■□□□□ 0.6
SHMT1-203ENST00000354098 TAS2R43P59537 309 aa18.78■□□□□ 0.6
SHMT1-203ENST00000354098 ACSM1Q08AH1 577 aa18.78■□□□□ 0.6
SHMT1-203ENST00000354098 TBCEQ15813 527 aaPredicted RBP18.78■□□□□ 0.6
SHMT1-203ENST00000354098 KRT74Q7RTS7 529 aa18.78■□□□□ 0.6
SHMT1-203ENST00000354098 TGIF2LYQ8IUE0 185 aa18.78■□□□□ 0.6
SHMT1-203ENST00000354098 PGLYRP3Q96LB9 341 aa18.78■□□□□ 0.6
SHMT1-203ENST00000354098 CXXC4Q9H2H0 198 aa18.78■□□□□ 0.6
SHMT1-203ENST00000354098 ACOT13Q9NPJ3 140 aa18.78■□□□□ 0.6
SHMT1-203ENST00000354098 ENPP5Q9UJA9 477 aa18.78■□□□□ 0.6
SHMT1-203ENST00000354098 CACNG2Q9Y698 323 aa18.78■□□□□ 0.6
SHMT1-203ENST00000354098 DHRS7CA6NNS2 312 aa18.77■□□□□ 0.6
SHMT1-203ENST00000354098 MRPS14O60783 128 aaKnown RBP18.77■□□□□ 0.6
SHMT1-203ENST00000354098 KCTD21Q4G0X4 260 aa18.77■□□□□ 0.6
SHMT1-203ENST00000354098 CEP78Q5JTW2 689 aa18.77■□□□□ 0.6
SHMT1-203ENST00000354098 Q5PR19 223 aa18.77■□□□□ 0.6
SHMT1-203ENST00000354098 ZBTB37Q5TC79 503 aa18.77■□□□□ 0.6
SHMT1-203ENST00000354098 UBASH3BQ8TF42 649 aa18.77■□□□□ 0.6
SHMT1-203ENST00000354098 YIPF5Q969M3 257 aa18.77■□□□□ 0.6
SHMT1-203ENST00000354098 ITFG2Q969R8 447 aa18.77■□□□□ 0.6
SHMT1-203ENST00000354098 ITPKCQ96DU7 683 aa18.77■□□□□ 0.6
SHMT1-203ENST00000354098 MEGF10Q96KG7 1140 aa18.77■□□□□ 0.6
SHMT1-203ENST00000354098 EGLN1Q9GZT9 426 aa18.77■□□□□ 0.6
SHMT1-203ENST00000354098 FGF23Q9GZV9 251 aaPredicted RBP18.77■□□□□ 0.6
SHMT1-203ENST00000354098 PLEKHA1Q9HB21 404 aa18.77■□□□□ 0.6
SHMT1-203ENST00000354098 MPC1Q9Y5U8 109 aa18.77■□□□□ 0.6
SHMT1-203ENST00000354098 LOC100289279A0A1B0GTE1 492 aa18.76■□□□□ 0.59
SHMT1-203ENST00000354098 PLPP2O43688 288 aa18.76■□□□□ 0.59
SHMT1-203ENST00000354098 HSMCR30P0CW71 290 aa18.76■□□□□ 0.59
SHMT1-203ENST00000354098 BDH1Q02338 343 aa18.76■□□□□ 0.59
SHMT1-203ENST00000354098 OR13C3Q8NGS6 347 aa18.76■□□□□ 0.59
SHMT1-203ENST00000354098 OR13C5Q8NGS8 318 aa18.76■□□□□ 0.59
SHMT1-203ENST00000354098 OR8S1Q8NH09 359 aa18.76■□□□□ 0.59
SHMT1-203ENST00000354098 FGGYQ96C11 551 aa18.76■□□□□ 0.59
SHMT1-203ENST00000354098 ADAT3Q96EY9 351 aaPredicted RBP18.76■□□□□ 0.59
SHMT1-203ENST00000354098 ZNF275Q9NSD4 429 aaPredicted RBP18.76■□□□□ 0.59
SHMT1-203ENST00000354098 ZNF12P17014 697 aa18.76■□□□□ 0.59
SHMT1-203ENST00000354098 PCMT1P22061 227 aa18.76■□□□□ 0.59
SHMT1-203ENST00000354098 CARTPTQ16568 116 aa18.76■□□□□ 0.59
SHMT1-203ENST00000354098 TMEM42Q69YG0 159 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms