RNA–Protein interactions for RNA: ENST00000349748.7

CAPN3-203, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-203ENST00000349748 TCFL5Q9UL49 500 aa9.48□□□□□ -0.89
CAPN3-203ENST00000349748 ICAM5Q9UMF0 924 aa9.48□□□□□ -0.89
CAPN3-203ENST00000349748 TMEM127O75204 238 aa9.48□□□□□ -0.89
CAPN3-203ENST00000349748 PPBPP02775 128 aa9.48□□□□□ -0.89
CAPN3-203ENST00000349748 CD55P08174 381 aa9.48□□□□□ -0.89
CAPN3-203ENST00000349748 SRP19P09132 144 aaKnown RBP9.48□□□□□ -0.89
CAPN3-203ENST00000349748 JMJD7P0C870 316 aa9.48□□□□□ -0.89
CAPN3-203ENST00000349748 TDGF1P13385 188 aa9.48□□□□□ -0.89
CAPN3-203ENST00000349748 LAMP2P13473 410 aa9.48□□□□□ -0.89
CAPN3-203ENST00000349748 HSF1Q00613 529 aa9.48□□□□□ -0.89
CAPN3-203ENST00000349748 PMPCAQ10713 525 aa9.48□□□□□ -0.89
CAPN3-203ENST00000349748 MMDQ15546 238 aa9.48□□□□□ -0.89
CAPN3-203ENST00000349748 MDGA2Q7Z553 956 aa9.48□□□□□ -0.89
CAPN3-203ENST00000349748 LHFPL4Q7Z7J7 247 aa9.48□□□□□ -0.89
CAPN3-203ENST00000349748 STPG4Q8N801 248 aa9.48□□□□□ -0.89
CAPN3-203ENST00000349748 POC1AQ8NBT0 407 aa9.48□□□□□ -0.89
CAPN3-203ENST00000349748 NOXO1Q8NFA2 376 aa9.48□□□□□ -0.89
CAPN3-203ENST00000349748 ZNF480Q8WV37 535 aa9.48□□□□□ -0.89
CAPN3-203ENST00000349748 METTL21AQ8WXB1 218 aa9.48□□□□□ -0.89
CAPN3-203ENST00000349748 SLC41A2Q96JW4 573 aa9.48□□□□□ -0.89
CAPN3-203ENST00000349748 PRAP1Q96NZ9 151 aa9.48□□□□□ -0.89
CAPN3-203ENST00000349748 CABLES2Q9BTV7 478 aa9.48□□□□□ -0.89
CAPN3-203ENST00000349748 ABHD14AQ9BUJ0 271 aa9.48□□□□□ -0.89
CAPN3-203ENST00000349748 NMNAT2Q9BZQ4 307 aa9.48□□□□□ -0.89
CAPN3-203ENST00000349748 WFDC1Q9HC57 220 aa9.48□□□□□ -0.89
CAPN3-203ENST00000349748 DKKL1Q9UK85 242 aa9.48□□□□□ -0.89
CAPN3-203ENST00000349748 PAM16Q9Y3D7 125 aa9.48□□□□□ -0.89
CAPN3-203ENST00000349748 ANKUB1A6NFN9 424 aa9.48□□□□□ -0.89
CAPN3-203ENST00000349748 H7C4K7 107 aa9.48□□□□□ -0.89
CAPN3-203ENST00000349748 TMPRSS11DO60235 418 aa9.48□□□□□ -0.89
CAPN3-203ENST00000349748 TRAPPC6AO75865 159 aa9.48□□□□□ -0.89
CAPN3-203ENST00000349748 GAPDHP04406 335 aaKnown RBP9.48□□□□□ -0.89
CAPN3-203ENST00000349748 ATP1B2P14415 290 aaPredicted RBP9.48□□□□□ -0.89
CAPN3-203ENST00000349748 TUBG1P23258 451 aa9.48□□□□□ -0.89
CAPN3-203ENST00000349748 CLEC12BQ2HXU8 276 aa9.48□□□□□ -0.89
CAPN3-203ENST00000349748 ZNF66Q6ZN08 573 aa9.48□□□□□ -0.89
CAPN3-203ENST00000349748 TRAPPC6BQ86SZ2 158 aa9.48□□□□□ -0.89
CAPN3-203ENST00000349748 PRSS16Q9NQE7 514 aa9.48□□□□□ -0.89
CAPN3-203ENST00000349748 TM7SF3Q9NS93 570 aa9.48□□□□□ -0.89
CAPN3-203ENST00000349748 AURKAIP1Q9NWT8 199 aaPredicted RBP9.48□□□□□ -0.89
CAPN3-203ENST00000349748 KLHDC2Q9Y2U9 406 aa9.48□□□□□ -0.89
CAPN3-203ENST00000349748 C8orf89P0DMQ9 161 aa9.47□□□□□ -0.89
CAPN3-203ENST00000349748 FGF8P55075 233 aaPredicted RBP9.47□□□□□ -0.89
CAPN3-203ENST00000349748 PLEKHS1Q5SXH7 462 aa9.47□□□□□ -0.89
CAPN3-203ENST00000349748 OPN5Q6U736 354 aa9.47□□□□□ -0.89
CAPN3-203ENST00000349748 SLC25A26Q70HW3 274 aa9.47□□□□□ -0.89
CAPN3-203ENST00000349748 RTN4RL2Q86UN3 420 aa9.47□□□□□ -0.89
CAPN3-203ENST00000349748 ZNF676Q8N7Q3 588 aa9.47□□□□□ -0.89
CAPN3-203ENST00000349748 TMEM37Q8WXS4 190 aa9.47□□□□□ -0.89
CAPN3-203ENST00000349748 TMEM230Q96A57 120 aa9.47□□□□□ -0.89
CAPN3-203ENST00000349748 C2orf50Q96LR7 162 aa9.47□□□□□ -0.89
CAPN3-203ENST00000349748 ARV1Q9H2C2 271 aa9.47□□□□□ -0.89
CAPN3-203ENST00000349748 IL23AQ9NPF7 189 aa9.47□□□□□ -0.89
CAPN3-203ENST00000349748 CGGBP1Q9UFW8 167 aaPredicted RBP9.47□□□□□ -0.89
CAPN3-203ENST00000349748 KCNK6Q9Y257 313 aa9.47□□□□□ -0.89
CAPN3-203ENST00000349748 MYO7AQ13402 2215 aa9.47□□□□□ -0.89
CAPN3-203ENST00000349748 A8MVM7 634 aa9.47□□□□□ -0.89
CAPN3-203ENST00000349748 PET100P0DJ07 73 aa9.47□□□□□ -0.89
CAPN3-203ENST00000349748 IRF1P10914 325 aa9.47□□□□□ -0.89
CAPN3-203ENST00000349748 BCKDHBP21953 392 aa9.47□□□□□ -0.89
CAPN3-203ENST00000349748 CSNK1A1LQ8N752 337 aa9.47□□□□□ -0.89
CAPN3-203ENST00000349748 NPEPL1Q8NDH3 523 aa9.47□□□□□ -0.89
CAPN3-203ENST00000349748 OR2AJ1Q8NGZ0 328 aa9.47□□□□□ -0.89
CAPN3-203ENST00000349748 RPS4Y2Q8TD47 263 aa9.47□□□□□ -0.89
CAPN3-203ENST00000349748 GRHL3Q8TE85 626 aa9.47□□□□□ -0.89
CAPN3-203ENST00000349748 NMNAT3Q96T66 252 aa9.47□□□□□ -0.89
CAPN3-203ENST00000349748 RAB18Q9NP72 206 aa9.47□□□□□ -0.89
CAPN3-203ENST00000349748 DYRK1BQ9Y463 629 aa9.47□□□□□ -0.89
CAPN3-203ENST00000349748 LSM5Q9Y4Y9 91 aaKnown RBP9.47□□□□□ -0.89
CAPN3-203ENST00000349748 SCN8AQ9UQD0 1980 aa9.46□□□□□ -0.89
CAPN3-203ENST00000349748 TRBV5-5A0A0J9YX44 114 aa9.46□□□□□ -0.89
CAPN3-203ENST00000349748 C4orf47A7E2U8 309 aa9.46□□□□□ -0.89
CAPN3-203ENST00000349748 METTL12A8MUP2 240 aa9.46□□□□□ -0.89
CAPN3-203ENST00000349748 VAMP5O95183 116 aa9.46□□□□□ -0.89
CAPN3-203ENST00000349748 IFNA6P05013 189 aa9.46□□□□□ -0.89
CAPN3-203ENST00000349748 RPS27P42677 84 aaKnown RBP9.46□□□□□ -0.89
CAPN3-203ENST00000349748 FOXF1Q12946 379 aa9.46□□□□□ -0.89
CAPN3-203ENST00000349748 ZNF260Q3ZCT1 412 aa9.46□□□□□ -0.89
CAPN3-203ENST00000349748 TMPRSS7Q7RTY8 843 aa9.46□□□□□ -0.89
CAPN3-203ENST00000349748 MRPL52Q86TS9 123 aaKnown RBP9.46□□□□□ -0.89
CAPN3-203ENST00000349748 OR14L1PQ8NHC6 308 aa9.46□□□□□ -0.89
CAPN3-203ENST00000349748 GPR119Q8TDV5 335 aa9.46□□□□□ -0.89
CAPN3-203ENST00000349748 OR7D2Q96RA2 312 aa9.46□□□□□ -0.89
CAPN3-203ENST00000349748 RNF2Q99496 336 aa9.46□□□□□ -0.89
CAPN3-203ENST00000349748 ZNF581Q9P0T4 197 aa9.46□□□□□ -0.89
CAPN3-203ENST00000349748 RNF115Q9Y4L5 304 aa9.46□□□□□ -0.89
CAPN3-203ENST00000349748 A0A1B0GUS0 222 aa9.46□□□□□ -0.9
CAPN3-203ENST00000349748 GRXCR1A8MXD5 290 aa9.46□□□□□ -0.9
CAPN3-203ENST00000349748 OR10J1P30954 320 aa9.46□□□□□ -0.9
CAPN3-203ENST00000349748 DUSP2Q05923 314 aa9.46□□□□□ -0.9
CAPN3-203ENST00000349748 UBE2V1Q13404 147 aa9.46□□□□□ -0.9
CAPN3-203ENST00000349748 GXYLT1Q4G148 440 aa9.46□□□□□ -0.9
CAPN3-203ENST00000349748 P4HA3Q7Z4N8 544 aa9.46□□□□□ -0.9
CAPN3-203ENST00000349748 NECAP1Q8NC96 275 aa9.46□□□□□ -0.9
CAPN3-203ENST00000349748 ZNF417Q8TAU3 575 aa9.46□□□□□ -0.9
CAPN3-203ENST00000349748 WFDC12Q8WWY7 111 aa9.46□□□□□ -0.9
CAPN3-203ENST00000349748 NRTNQ99748 197 aa9.46□□□□□ -0.9
CAPN3-203ENST00000349748 KXD1Q9BQD3 176 aa9.46□□□□□ -0.9
CAPN3-203ENST00000349748 EFCAB11Q9BUY7 163 aa9.46□□□□□ -0.9
CAPN3-203ENST00000349748 TRIM2Q9C040 744 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms