RNA–Protein interactions for RNA: ENST00000349062.6

TRIM4-201, Transcript of tripartite motif containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM4, Length 3,374 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-201ENST00000349062 FAUP35544 74 aaKnown RBP12.24□□□□□ -0.45
TRIM4-201ENST00000349062 SRSF6Q13247 344 aaKnown RBP12.24□□□□□ -0.45
TRIM4-201ENST00000349062 TRA2AQ13595 282 aaKnown RBP eCLIP12.24□□□□□ -0.45
TRIM4-201ENST00000349062 ADGRE4PQ86SQ3 457 aa12.24□□□□□ -0.45
TRIM4-201ENST00000349062 ZNF584Q8IVC4 421 aa12.24□□□□□ -0.45
TRIM4-201ENST00000349062 NAXDQ8IW45 347 aa12.24□□□□□ -0.45
TRIM4-201ENST00000349062 GPR137CQ8N3F9 429 aa12.24□□□□□ -0.45
TRIM4-201ENST00000349062 BVESQ8NE79 360 aa12.24□□□□□ -0.45
TRIM4-201ENST00000349062 OR6X1Q8NH79 312 aa12.24□□□□□ -0.45
TRIM4-201ENST00000349062 PAQR8Q8TEZ7 354 aa12.24□□□□□ -0.45
TRIM4-201ENST00000349062 ZBTB8AQ96BR9 441 aa12.24□□□□□ -0.45
TRIM4-201ENST00000349062 S100A13Q99584 98 aa12.24□□□□□ -0.45
TRIM4-201ENST00000349062 ST6GALNAC5Q9BVH7 336 aa12.24□□□□□ -0.45
TRIM4-201ENST00000349062 ANGPTL4Q9BY76 406 aa12.24□□□□□ -0.45
TRIM4-201ENST00000349062 DEFB127Q9H1M4 99 aa12.24□□□□□ -0.45
TRIM4-201ENST00000349062 GPR173Q9NS66 373 aa12.24□□□□□ -0.45
TRIM4-201ENST00000349062 MRPS28Q9Y2Q9 187 aaKnown RBP12.24□□□□□ -0.45
TRIM4-201ENST00000349062 DCHS1Q96JQ0 3298 aa12.24□□□□□ -0.45
TRIM4-201ENST00000349062 LOC102723996A0A087X1L8 192 aa12.24□□□□□ -0.45
TRIM4-201ENST00000349062 METTL21EPA6NDL7 271 aa12.24□□□□□ -0.45
TRIM4-201ENST00000349062 STMND1H3BQB6 276 aa12.24□□□□□ -0.45
TRIM4-201ENST00000349062 H7C2Y5 167 aa12.24□□□□□ -0.45
TRIM4-201ENST00000349062 HTR3BO95264 441 aa12.24□□□□□ -0.45
TRIM4-201ENST00000349062 IGHMP01871 453 aa12.24□□□□□ -0.45
TRIM4-201ENST00000349062 MSR1P21757 451 aa12.24□□□□□ -0.45
TRIM4-201ENST00000349062 CD96P40200 585 aa12.24□□□□□ -0.45
TRIM4-201ENST00000349062 CXADRP78310 365 aa12.24□□□□□ -0.45
TRIM4-201ENST00000349062 FADS6Q8N9I5 356 aa12.24□□□□□ -0.45
TRIM4-201ENST00000349062 M1APQ8TC57 530 aa12.24□□□□□ -0.45
TRIM4-201ENST00000349062 C2CD4CQ8TF44 421 aa12.24□□□□□ -0.45
TRIM4-201ENST00000349062 NAA11Q9BSU3 229 aaPredicted RBP12.24□□□□□ -0.45
TRIM4-201ENST00000349062 ZNF230Q9UIE0 474 aaPredicted RBP12.24□□□□□ -0.45
TRIM4-201ENST00000349062 SPAARA0A1B0GVQ0 90 aa12.23□□□□□ -0.45
TRIM4-201ENST00000349062 ARGFXA6NJG6 315 aa12.23□□□□□ -0.45
TRIM4-201ENST00000349062 ZNF736B4DX44 427 aaPredicted RBP12.23□□□□□ -0.45
TRIM4-201ENST00000349062 BET1O15155 118 aa12.23□□□□□ -0.45
TRIM4-201ENST00000349062 KCNAB3O43448 404 aa12.23□□□□□ -0.45
TRIM4-201ENST00000349062 PRAF2O60831 178 aa12.23□□□□□ -0.45
TRIM4-201ENST00000349062 AKR1C4P17516 323 aa12.23□□□□□ -0.45
TRIM4-201ENST00000349062 DLX5P56178 289 aa12.23□□□□□ -0.45
TRIM4-201ENST00000349062 CSNK2A1P68400 391 aaPredicted RBP12.23□□□□□ -0.45
TRIM4-201ENST00000349062 HACD4Q5VWC8 232 aa12.23□□□□□ -0.45
TRIM4-201ENST00000349062 KCTD9Q7L273 389 aa12.23□□□□□ -0.45
TRIM4-201ENST00000349062 FJX1Q86VR8 437 aa12.23□□□□□ -0.45
TRIM4-201ENST00000349062 ZFP82Q8N141 532 aa12.23□□□□□ -0.45
TRIM4-201ENST00000349062 BPIFB2Q8N4F0 458 aa12.23□□□□□ -0.45
TRIM4-201ENST00000349062 RPS4Y2Q8TD47 263 aa12.23□□□□□ -0.45
TRIM4-201ENST00000349062 MFRPQ9BY79 579 aa12.23□□□□□ -0.45
TRIM4-201ENST00000349062 PIGLQ9Y2B2 252 aa12.23□□□□□ -0.45
TRIM4-201ENST00000349062 APC2O95996 2303 aa12.23□□□□□ -0.45
TRIM4-201ENST00000349062 A0A1B0GUH1 482 aa12.23□□□□□ -0.45
TRIM4-201ENST00000349062 DISC1C4P0D8 188 aa12.23□□□□□ -0.45
TRIM4-201ENST00000349062 H7C417 338 aa12.23□□□□□ -0.45
TRIM4-201ENST00000349062 TPPPO94811 219 aa12.23□□□□□ -0.45
TRIM4-201ENST00000349062 TGM6O95932 706 aa12.23□□□□□ -0.45
TRIM4-201ENST00000349062 MT-CO3P00414 261 aa12.23□□□□□ -0.45
TRIM4-201ENST00000349062 CD1AP06126 327 aa12.23□□□□□ -0.45
TRIM4-201ENST00000349062 GIPP09681 153 aaPredicted RBP12.23□□□□□ -0.45
TRIM4-201ENST00000349062 VSIG10L2P0DP72 767 aa12.23□□□□□ -0.45
TRIM4-201ENST00000349062 FCGR2AP12318 317 aa12.23□□□□□ -0.45
TRIM4-201ENST00000349062 GABRA1P14867 456 aa12.23□□□□□ -0.45
TRIM4-201ENST00000349062 PPP3CBP16298 524 aa12.23□□□□□ -0.45
TRIM4-201ENST00000349062 GABRR1P24046 479 aa12.23□□□□□ -0.45
TRIM4-201ENST00000349062 AVPR2P30518 371 aa12.23□□□□□ -0.45
TRIM4-201ENST00000349062 MAGEA5P43359 124 aa12.23□□□□□ -0.45
TRIM4-201ENST00000349062 CEACAM16Q2WEN9 425 aa12.23□□□□□ -0.45
TRIM4-201ENST00000349062 DTX1Q86Y01 620 aa12.23□□□□□ -0.45
TRIM4-201ENST00000349062 C20orf196Q8IYI0 205 aa12.23□□□□□ -0.45
TRIM4-201ENST00000349062 GABRG1Q8N1C3 465 aa12.23□□□□□ -0.45
TRIM4-201ENST00000349062 TAAR9Q96RI9 348 aa12.23□□□□□ -0.45
TRIM4-201ENST00000349062 TSNAXQ99598 290 aaKnown RBP12.23□□□□□ -0.45
TRIM4-201ENST00000349062 C7orf50Q9BRJ6 194 aaKnown RBP12.23□□□□□ -0.45
TRIM4-201ENST00000349062 C12orf49Q9H741 205 aa12.23□□□□□ -0.45
TRIM4-201ENST00000349062 FAM86C1Q9NVL1 165 aa12.23□□□□□ -0.45
TRIM4-201ENST00000349062 PRR13Q9NZ81 148 aa12.23□□□□□ -0.45
TRIM4-201ENST00000349062 MTFP1Q9UDX5 166 aa12.23□□□□□ -0.45
TRIM4-201ENST00000349062 SOCS1O15524 211 aa12.22□□□□□ -0.45
TRIM4-201ENST00000349062 AQP8O94778 261 aa12.22□□□□□ -0.45
TRIM4-201ENST00000349062 AKAIN1P0CW23 69 aa12.22□□□□□ -0.45
TRIM4-201ENST00000349062 ZNF84P51523 738 aa12.22□□□□□ -0.45
TRIM4-201ENST00000349062 SLC25A47Q6Q0C1 308 aa12.22□□□□□ -0.45
TRIM4-201ENST00000349062 SEZ6L2Q6UXD5 910 aa12.22□□□□□ -0.45
TRIM4-201ENST00000349062 ZNF546Q86UE3 836 aa12.22□□□□□ -0.45
TRIM4-201ENST00000349062 MUC20Q8N307 709 aaPredicted RBP12.22□□□□□ -0.45
TRIM4-201ENST00000349062 SEH1LQ96EE3 360 aa12.22□□□□□ -0.45
TRIM4-201ENST00000349062 PLEKHA6Q9Y2H5 1048 aa12.22□□□□□ -0.45
TRIM4-201ENST00000349062 SDCBPO00560 298 aaPredicted RBP12.22□□□□□ -0.45
TRIM4-201ENST00000349062 VSIG8P0DPA2 414 aa12.22□□□□□ -0.45
TRIM4-201ENST00000349062 HTR5AP47898 357 aa12.22□□□□□ -0.45
TRIM4-201ENST00000349062 MMP16P51512 607 aa12.22□□□□□ -0.45
TRIM4-201ENST00000349062 BAMBIQ13145 260 aa12.22□□□□□ -0.45
TRIM4-201ENST00000349062 C1QL2Q7Z5L3 287 aa12.22□□□□□ -0.45
TRIM4-201ENST00000349062 BHLHE23Q8NDY6 225 aa12.22□□□□□ -0.45
TRIM4-201ENST00000349062 POFUT1Q9H488 388 aa12.22□□□□□ -0.45
TRIM4-201ENST00000349062 LDAHQ9H6V9 325 aa12.22□□□□□ -0.45
TRIM4-201ENST00000349062 FAM221AA4D161 298 aa12.22□□□□□ -0.45
TRIM4-201ENST00000349062 M0R135 149 aa12.22□□□□□ -0.45
TRIM4-201ENST00000349062 CDX4O14627 284 aaPredicted RBP12.22□□□□□ -0.45
TRIM4-201ENST00000349062 SPRY1O43609 319 aaPredicted RBP12.22□□□□□ -0.45
TRIM4-201ENST00000349062 IFNA6P05013 189 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms