RNA–Protein interactions for RNA: ENST00000348749.9

CHRNA1-202, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA1, Length 1,984 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-202ENST00000348749 MMP24Q9Y5R2 645 aa9.17□□□□□ -0.94
CHRNA1-202ENST00000348749 CXCL1P09341 107 aa9.17□□□□□ -0.94
CHRNA1-202ENST00000348749 CT45A8P0DMV1 189 aa9.17□□□□□ -0.94
CHRNA1-202ENST00000348749 CT45A9P0DMV2 189 aa9.17□□□□□ -0.94
CHRNA1-202ENST00000348749 OR13C7P0DN81 318 aa9.17□□□□□ -0.94
CHRNA1-202ENST00000348749 RPS2P15880 293 aaKnown RBP9.17□□□□□ -0.94
CHRNA1-202ENST00000348749 FGF7P21781 194 aa9.17□□□□□ -0.94
CHRNA1-202ENST00000348749 GPR3P46089 330 aa9.17□□□□□ -0.94
CHRNA1-202ENST00000348749 MFGE8Q08431 387 aaPredicted RBP9.17□□□□□ -0.94
CHRNA1-202ENST00000348749 SPOCK1Q08629 439 aa9.17□□□□□ -0.94
CHRNA1-202ENST00000348749 FUT7Q11130 342 aa9.17□□□□□ -0.94
CHRNA1-202ENST00000348749 UNC119Q13432 240 aa9.17□□□□□ -0.94
CHRNA1-202ENST00000348749 OR8G1Q15617 311 aa9.17□□□□□ -0.94
CHRNA1-202ENST00000348749 HIKESHIQ53FT3 197 aa9.17□□□□□ -0.94
CHRNA1-202ENST00000348749 CT45A2Q5DJT8 189 aa9.17□□□□□ -0.94
CHRNA1-202ENST00000348749 DGAT2L6Q6ZPD8 337 aa9.17□□□□□ -0.94
CHRNA1-202ENST00000348749 DPPA2Q7Z7J5 298 aa9.17□□□□□ -0.94
CHRNA1-202ENST00000348749 CACUL1Q86Y37 369 aa9.17□□□□□ -0.94
CHRNA1-202ENST00000348749 ZNF101Q8IZC7 436 aa9.17□□□□□ -0.94
CHRNA1-202ENST00000348749 ARL6IP6Q8N6S5 226 aa9.17□□□□□ -0.94
CHRNA1-202ENST00000348749 OR4N2Q8NGD1 307 aa9.17□□□□□ -0.94
CHRNA1-202ENST00000348749 C5orf34Q96MH7 638 aa9.17□□□□□ -0.94
CHRNA1-202ENST00000348749 TSPAN32Q96QS1 320 aa9.17□□□□□ -0.94
CHRNA1-202ENST00000348749 CDCA3Q99618 268 aaPredicted RBP9.17□□□□□ -0.94
CHRNA1-202ENST00000348749 CCDC3Q9BQI4 270 aa9.17□□□□□ -0.94
CHRNA1-202ENST00000348749 RTBDNQ9BSG5 229 aaPredicted RBP9.17□□□□□ -0.94
CHRNA1-202ENST00000348749 FBLN5Q9UBX5 448 aa9.17□□□□□ -0.94
CHRNA1-202ENST00000348749 SUSD2Q9UGT4 822 aa9.17□□□□□ -0.94
CHRNA1-202ENST00000348749 HHLA2Q9UM44 414 aa9.17□□□□□ -0.94
CHRNA1-202ENST00000348749 WASF3Q9UPY6 502 aa9.17□□□□□ -0.94
CHRNA1-202ENST00000348749 FBXO7Q9Y3I1 522 aa9.17□□□□□ -0.94
CHRNA1-202ENST00000348749 CBY1Q9Y3M2 126 aa9.17□□□□□ -0.94
CHRNA1-202ENST00000348749 PUS1Q9Y606 427 aaKnown RBP eCLIP9.17□□□□□ -0.94
CHRNA1-202ENST00000348749 CACNA1IQ9P0X4 2223 aa9.17□□□□□ -0.94
CHRNA1-202ENST00000348749 SCN2AQ99250 2005 aa9.17□□□□□ -0.94
CHRNA1-202ENST00000348749 FANCMQ8IYD8 2048 aa9.16□□□□□ -0.94
CHRNA1-202ENST00000348749 BORCS7-ASMTA0A0B4J1R7 106 aa9.16□□□□□ -0.94
CHRNA1-202ENST00000348749 H7C1C5 153 aa9.16□□□□□ -0.94
CHRNA1-202ENST00000348749 MASP2O00187 686 aa9.16□□□□□ -0.94
CHRNA1-202ENST00000348749 DVL1O14640 695 aa9.16□□□□□ -0.94
CHRNA1-202ENST00000348749 TGOLN2O43493 480 aa9.16□□□□□ -0.94
CHRNA1-202ENST00000348749 BPNT1O95861 308 aa9.16□□□□□ -0.94
CHRNA1-202ENST00000348749 FABP4P15090 132 aa9.16□□□□□ -0.94
CHRNA1-202ENST00000348749 IL2RGP31785 369 aa9.16□□□□□ -0.94
CHRNA1-202ENST00000348749 WASP42768 502 aa9.16□□□□□ -0.94
CHRNA1-202ENST00000348749 SLC6A8P48029 635 aa9.16□□□□□ -0.94
CHRNA1-202ENST00000348749 NUBP1P53384 320 aa9.16□□□□□ -0.94
CHRNA1-202ENST00000348749 LCN6P62502 163 aa9.16□□□□□ -0.94
CHRNA1-202ENST00000348749 YPEL5P62699 121 aa9.16□□□□□ -0.94
CHRNA1-202ENST00000348749 GFI1BQ5VTD9 330 aa9.16□□□□□ -0.94
CHRNA1-202ENST00000348749 ZNF385CQ66K41 422 aaPredicted RBP9.16□□□□□ -0.94
CHRNA1-202ENST00000348749 SLC18B1Q6NT16 456 aa9.16□□□□□ -0.94
CHRNA1-202ENST00000348749 SLC22A25Q6T423 547 aa9.16□□□□□ -0.94
CHRNA1-202ENST00000348749 LHFPL1Q86WI0 220 aa9.16□□□□□ -0.94
CHRNA1-202ENST00000348749 OOSP2Q86WS3 158 aa9.16□□□□□ -0.94
CHRNA1-202ENST00000348749 YAF2Q8IY57 180 aa9.16□□□□□ -0.94
CHRNA1-202ENST00000348749 TMEFF1Q8IYR6 380 aa9.16□□□□□ -0.94
CHRNA1-202ENST00000348749 ARHGEF39Q8N4T4 335 aa9.16□□□□□ -0.94
CHRNA1-202ENST00000348749 OR13C3Q8NGS6 347 aa9.16□□□□□ -0.94
CHRNA1-202ENST00000348749 OR10G6Q8NH81 332 aa9.16□□□□□ -0.94
CHRNA1-202ENST00000348749 PPP1R14AQ96A00 147 aa9.16□□□□□ -0.94
CHRNA1-202ENST00000348749 MVB12AQ96EY5 273 aa9.16□□□□□ -0.94
CHRNA1-202ENST00000348749 DGAT2Q96PD7 388 aa9.16□□□□□ -0.94
CHRNA1-202ENST00000348749 LPAR4Q99677 370 aa9.16□□□□□ -0.94
CHRNA1-202ENST00000348749 PRRX2Q99811 253 aa9.16□□□□□ -0.94
CHRNA1-202ENST00000348749 GABRG3Q99928 467 aa9.16□□□□□ -0.94
CHRNA1-202ENST00000348749 PARP12Q9H0J9 701 aaKnown RBP9.16□□□□□ -0.94
CHRNA1-202ENST00000348749 PRR13Q9NZ81 148 aa9.16□□□□□ -0.94
CHRNA1-202ENST00000348749 GSKIPQ9P0R6 139 aa9.16□□□□□ -0.94
CHRNA1-202ENST00000348749 TUBD1Q9UJT1 453 aa9.16□□□□□ -0.94
CHRNA1-202ENST00000348749 MTCH2Q9Y6C9 303 aa9.16□□□□□ -0.94
CHRNA1-202ENST00000348749 C2orf16Q68DN1 1984 aa9.16□□□□□ -0.94
CHRNA1-202ENST00000348749 CCDC187A0A096LP49 1063 aa9.15□□□□□ -0.94
CHRNA1-202ENST00000348749 TLCD2A6NGC4 264 aa9.15□□□□□ -0.94
CHRNA1-202ENST00000348749 GRXCR1A8MXD5 290 aa9.15□□□□□ -0.94
CHRNA1-202ENST00000348749 C9J4A7 227 aa9.15□□□□□ -0.94
CHRNA1-202ENST00000348749 SLC31A1O15431 190 aa9.15□□□□□ -0.94
CHRNA1-202ENST00000348749 RAMP1O60894 148 aa9.15□□□□□ -0.94
CHRNA1-202ENST00000348749 SRSF10O75494 262 aaKnown RBP9.15□□□□□ -0.94
CHRNA1-202ENST00000348749 ISG15P05161 165 aa9.15□□□□□ -0.94
CHRNA1-202ENST00000348749 HCKP08631 526 aa9.15□□□□□ -0.94
CHRNA1-202ENST00000348749 GNB3P16520 340 aa9.15□□□□□ -0.94
CHRNA1-202ENST00000348749 HSD11B1P28845 292 aa9.15□□□□□ -0.94
CHRNA1-202ENST00000348749 KIR2DL1P43626 348 aaPredicted RBP9.15□□□□□ -0.94
CHRNA1-202ENST00000348749 NPY4RP50391 375 aa9.15□□□□□ -0.94
CHRNA1-202ENST00000348749 CLDN6P56747 220 aa9.15□□□□□ -0.94
CHRNA1-202ENST00000348749 BTG2P78543 158 aa9.15□□□□□ -0.94
CHRNA1-202ENST00000348749 HNF4GQ14541 408 aa9.15□□□□□ -0.94
CHRNA1-202ENST00000348749 JOSD1Q15040 202 aaPredicted RBP9.15□□□□□ -0.94
CHRNA1-202ENST00000348749 USF2Q15853 346 aaPredicted RBP9.15□□□□□ -0.94
CHRNA1-202ENST00000348749 ANKRD39Q53RE8 183 aa9.15□□□□□ -0.94
CHRNA1-202ENST00000348749 KCTD18Q6PI47 426 aaPredicted RBP9.15□□□□□ -0.94
CHRNA1-202ENST00000348749 C10orf53Q8N6V4 93 aa9.15□□□□□ -0.94
CHRNA1-202ENST00000348749 AVL9Q8NBF6 648 aa9.15□□□□□ -0.94
CHRNA1-202ENST00000348749 RNASEH2CQ8TDP1 164 aaKnown RBP9.15□□□□□ -0.94
CHRNA1-202ENST00000348749 PACRGQ96M98 296 aaPredicted RBP9.15□□□□□ -0.94
CHRNA1-202ENST00000348749 MOGAT1Q96PD6 335 aa9.15□□□□□ -0.94
CHRNA1-202ENST00000348749 SUCNR1Q9BXA5 334 aa9.15□□□□□ -0.94
CHRNA1-202ENST00000348749 SLC25A31Q9H0C2 315 aa9.15□□□□□ -0.94
CHRNA1-202ENST00000348749 NELFAQ9H3P2 528 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms