RNA–Protein interactions for RNA: ENST00000348259.9

MRPL55-204, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 2 BASIC

Gene MRPL55, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-204ENST00000348259 TMEM108Q6UXF1 575 aa8.35□□□□□ -1.07
MRPL55-204ENST00000348259 LINC00346Q8IVM7 164 aa8.35□□□□□ -1.07
MRPL55-204ENST00000348259 FBXL14Q8N1E6 418 aa8.35□□□□□ -1.07
MRPL55-204ENST00000348259 ZNF676Q8N7Q3 588 aa8.35□□□□□ -1.07
MRPL55-204ENST00000348259 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.35□□□□□ -1.07
MRPL55-204ENST00000348259 WDR31Q8NA23 367 aa8.35□□□□□ -1.07
MRPL55-204ENST00000348259 SEMA6DQ8NFY4 1073 aa8.35□□□□□ -1.07
MRPL55-204ENST00000348259 MUCL1Q96DR8 90 aa8.35□□□□□ -1.07
MRPL55-204ENST00000348259 CMTM3Q96MX0 182 aa8.35□□□□□ -1.07
MRPL55-204ENST00000348259 SORCS2Q96PQ0 1159 aa8.35□□□□□ -1.07
MRPL55-204ENST00000348259 OR14A2Q96R54 314 aa8.35□□□□□ -1.07
MRPL55-204ENST00000348259 ATF6BQ99941 703 aa8.35□□□□□ -1.07
MRPL55-204ENST00000348259 MRI1Q9BV20 369 aa8.35□□□□□ -1.07
MRPL55-204ENST00000348259 ZNF416Q9BWM5 594 aa8.35□□□□□ -1.07
MRPL55-204ENST00000348259 CHODLQ9H9P2 273 aa8.35□□□□□ -1.07
MRPL55-204ENST00000348259 GPR35Q9HC97 309 aa8.35□□□□□ -1.07
MRPL55-204ENST00000348259 EMC7Q9NPA0 242 aa8.35□□□□□ -1.07
MRPL55-204ENST00000348259 PNRC2Q9NPJ4 139 aaKnown RBP8.35□□□□□ -1.07
MRPL55-204ENST00000348259 TMEM38BQ9NVV0 291 aa8.35□□□□□ -1.07
MRPL55-204ENST00000348259 FAM206AQ9NX38 181 aa8.35□□□□□ -1.07
MRPL55-204ENST00000348259 ASH2LQ9UBL3 628 aa8.35□□□□□ -1.07
MRPL55-204ENST00000348259 MALT1Q9UDY8 824 aa8.35□□□□□ -1.07
MRPL55-204ENST00000348259 OR52A1Q9UKL2 312 aa8.35□□□□□ -1.07
MRPL55-204ENST00000348259 NOSIPQ9Y314 301 aaKnown RBP8.35□□□□□ -1.07
MRPL55-204ENST00000348259 CMAHPQ9Y471 501 aa8.35□□□□□ -1.07
MRPL55-204ENST00000348259 A0A0G2JK05 382 aa8.34□□□□□ -1.07
MRPL55-204ENST00000348259 TMEM269A0A1B0GVZ9 245 aa8.34□□□□□ -1.07
MRPL55-204ENST00000348259 NOTOA8MTQ0 251 aa8.34□□□□□ -1.07
MRPL55-204ENST00000348259 LOC110117498-PIK3R3F6TDL0 507 aa8.34□□□□□ -1.07
MRPL55-204ENST00000348259 CTDSP2O14595 271 aa8.34□□□□□ -1.07
MRPL55-204ENST00000348259 ITGA5P08648 1049 aa8.34□□□□□ -1.07
MRPL55-204ENST00000348259 OCM2P0CE71 109 aa8.34□□□□□ -1.07
MRPL55-204ENST00000348259 UBCP0CG48 685 aaKnown RBP8.34□□□□□ -1.07
MRPL55-204ENST00000348259 CD37P11049 281 aa8.34□□□□□ -1.07
MRPL55-204ENST00000348259 RAB3BP20337 219 aa8.34□□□□□ -1.07
MRPL55-204ENST00000348259 ACHEP22303 614 aa8.34□□□□□ -1.07
MRPL55-204ENST00000348259 OTX1P32242 354 aaPredicted RBP8.34□□□□□ -1.07
MRPL55-204ENST00000348259 FABP6P51161 128 aa8.34□□□□□ -1.07
MRPL55-204ENST00000348259 PSMA6P60900 246 aaKnown RBP8.34□□□□□ -1.07
MRPL55-204ENST00000348259 PCBD1P61457 104 aa8.34□□□□□ -1.07
MRPL55-204ENST00000348259 PPP3R1P63098 170 aa8.34□□□□□ -1.07
MRPL55-204ENST00000348259 SGCAQ16586 387 aa8.34□□□□□ -1.07
MRPL55-204ENST00000348259 CR1LQ2VPA4 569 aa8.34□□□□□ -1.07
MRPL55-204ENST00000348259 SPANXN2Q5MJ10 180 aa8.34□□□□□ -1.07
MRPL55-204ENST00000348259 FAM27D1Q5T7N8 215 aa8.34□□□□□ -1.07
MRPL55-204ENST00000348259 FBXW9Q5XUX1 488 aa8.34□□□□□ -1.07
MRPL55-204ENST00000348259 OR7E24Q6IFN5 339 aa8.34□□□□□ -1.07
MRPL55-204ENST00000348259 CORO6Q6QEF8 472 aa8.34□□□□□ -1.07
MRPL55-204ENST00000348259 KLHL24Q6TFL4 600 aa8.34□□□□□ -1.07
MRPL55-204ENST00000348259 METAP1DQ6UB28 335 aaPredicted RBP8.34□□□□□ -1.07
MRPL55-204ENST00000348259 CFAP77Q6ZQR2 320 aa8.34□□□□□ -1.07
MRPL55-204ENST00000348259 ZSCAN2Q7Z7L9 614 aaPredicted RBP8.34□□□□□ -1.07
MRPL55-204ENST00000348259 NR2C2APQ86WQ0 139 aa8.34□□□□□ -1.07
MRPL55-204ENST00000348259 ELMOD2Q8IZ81 293 aa8.34□□□□□ -1.07
MRPL55-204ENST00000348259 PIAS4Q8N2W9 510 aaPredicted RBP8.34□□□□□ -1.07
MRPL55-204ENST00000348259 OR13C5Q8NGS8 318 aa8.34□□□□□ -1.07
MRPL55-204ENST00000348259 BOD1Q96IK1 185 aa8.34□□□□□ -1.07
MRPL55-204ENST00000348259 KCNS3Q9BQ31 491 aa8.34□□□□□ -1.07
MRPL55-204ENST00000348259 SLC30A2Q9BRI3 323 aa8.34□□□□□ -1.07
MRPL55-204ENST00000348259 SLITRK2Q9H156 845 aa8.34□□□□□ -1.07
MRPL55-204ENST00000348259 CRLF2Q9HC73 371 aa8.34□□□□□ -1.07
MRPL55-204ENST00000348259 NOX4Q9NPH5 578 aa8.34□□□□□ -1.07
MRPL55-204ENST00000348259 CENPMQ9NSP4 180 aa8.34□□□□□ -1.07
MRPL55-204ENST00000348259 ABRACLQ9P1F3 81 aa8.34□□□□□ -1.07
MRPL55-204ENST00000348259 NUFIP1Q9UHK0 495 aaKnown RBP8.34□□□□□ -1.07
MRPL55-204ENST00000348259 POLR1DQ9Y2S0 133 aa8.34□□□□□ -1.07
MRPL55-204ENST00000348259 RER1O15258 196 aa8.33□□□□□ -1.08
MRPL55-204ENST00000348259 TCF21O43680 179 aa8.33□□□□□ -1.08
MRPL55-204ENST00000348259 RAD51DO75771 328 aa8.33□□□□□ -1.08
MRPL55-204ENST00000348259 WNT11O96014 354 aa8.33□□□□□ -1.08
MRPL55-204ENST00000348259 FSTP19883 344 aa8.33□□□□□ -1.08
MRPL55-204ENST00000348259 APOBEC3AP31941 199 aaPredicted RBP8.33□□□□□ -1.08
MRPL55-204ENST00000348259 PDLIM4P50479 330 aa8.33□□□□□ -1.08
MRPL55-204ENST00000348259 ZNF83P51522 516 aa8.33□□□□□ -1.08
MRPL55-204ENST00000348259 SCAND1P57086 179 aa8.33□□□□□ -1.08
MRPL55-204ENST00000348259 MFGE8Q08431 387 aaPredicted RBP8.33□□□□□ -1.08
MRPL55-204ENST00000348259 OTPQ5XKR4 325 aa8.33□□□□□ -1.08
MRPL55-204ENST00000348259 SFXN4Q6P4A7 337 aa8.33□□□□□ -1.08
MRPL55-204ENST00000348259 SLC22A25Q6T423 547 aa8.33□□□□□ -1.08
MRPL55-204ENST00000348259 Q6ZSR3 168 aa8.33□□□□□ -1.08
MRPL55-204ENST00000348259 ABHD12BQ7Z5M8 362 aaPredicted RBP8.33□□□□□ -1.08
MRPL55-204ENST00000348259 ZNF100Q8IYN0 542 aa8.33□□□□□ -1.08
MRPL55-204ENST00000348259 PARP16Q8N5Y8 322 aa8.33□□□□□ -1.08
MRPL55-204ENST00000348259 CCDC54Q8NEL0 328 aa8.33□□□□□ -1.08
MRPL55-204ENST00000348259 ZNF775Q96BV0 537 aaPredicted RBP8.33□□□□□ -1.08
MRPL55-204ENST00000348259 CEP19Q96LK0 163 aa8.33□□□□□ -1.08
MRPL55-204ENST00000348259 KCNJ15Q99712 375 aa8.33□□□□□ -1.08
MRPL55-204ENST00000348259 SOSTQ9BQB4 213 aa8.33□□□□□ -1.08
MRPL55-204ENST00000348259 HDHD2Q9H0R4 259 aa8.33□□□□□ -1.08
MRPL55-204ENST00000348259 MIXL1Q9H2W2 232 aa8.33□□□□□ -1.08
MRPL55-204ENST00000348259 ATPIF1Q9UII2 106 aa8.33□□□□□ -1.08
MRPL55-204ENST00000348259 ADAM30Q9UKF2 790 aa8.33□□□□□ -1.08
MRPL55-204ENST00000348259 FBXL3Q9UKT7 428 aa8.33□□□□□ -1.08
MRPL55-204ENST00000348259 HHLA2Q9UM44 414 aa8.33□□□□□ -1.08
MRPL55-204ENST00000348259 FOXJ3Q9UPW0 622 aa8.33□□□□□ -1.08
MRPL55-204ENST00000348259 SLC22A13Q9Y226 551 aa8.33□□□□□ -1.08
MRPL55-204ENST00000348259 TIMM10BQ9Y5J6 103 aa8.33□□□□□ -1.08
MRPL55-204ENST00000348259 LOC390937A0A1W2PQ73 354 aa8.32□□□□□ -1.08
MRPL55-204ENST00000348259 A0A1W2PR80 420 aa8.32□□□□□ -1.08
MRPL55-204ENST00000348259 ISPDA4D126 451 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms