RNA–Protein interactions for RNA: ENST00000347849.7

PTPN18-202, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 1 (best) BASIC

Gene PTPN18, Length 2,472 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-202ENST00000347849 FJX1Q86VR8 437 aa18.8■□□□□ 0.6
PTPN18-202ENST00000347849 CBLN2Q8IUK8 224 aa18.8■□□□□ 0.6
PTPN18-202ENST00000347849 GTPBP8Q8N3Z3 284 aaPredicted RBP18.8■□□□□ 0.6
PTPN18-202ENST00000347849 OR52N5Q8NH56 324 aa18.8■□□□□ 0.6
PTPN18-202ENST00000347849 ST7LQ8TDW4 575 aa18.8■□□□□ 0.6
PTPN18-202ENST00000347849 NTNG2Q96CW9 530 aa18.8■□□□□ 0.6
PTPN18-202ENST00000347849 PRRT1Q99946 306 aa18.8■□□□□ 0.6
PTPN18-202ENST00000347849 KCNK7Q9Y2U2 307 aa18.8■□□□□ 0.6
PTPN18-202ENST00000347849 EMC9Q9Y3B6 208 aa18.8■□□□□ 0.6
PTPN18-202ENST00000347849 C13orf42A0A1B0GVH6 325 aa18.79■□□□□ 0.6
PTPN18-202ENST00000347849 LMX1BO60663 402 aa18.79■□□□□ 0.6
PTPN18-202ENST00000347849 AKR1C4P17516 323 aa18.79■□□□□ 0.6
PTPN18-202ENST00000347849 CHST4Q8NCG5 386 aa18.79■□□□□ 0.6
PTPN18-202ENST00000347849 OR5AP2Q8NGF4 316 aa18.79■□□□□ 0.6
PTPN18-202ENST00000347849 OR4D6Q8NGJ1 314 aa18.79■□□□□ 0.6
PTPN18-202ENST00000347849 MITD1Q8WV92 249 aa18.79■□□□□ 0.6
PTPN18-202ENST00000347849 TAAR9Q96RI9 348 aa18.79■□□□□ 0.6
PTPN18-202ENST00000347849 PHB2Q99623 299 aa18.79■□□□□ 0.6
PTPN18-202ENST00000347849 STRADBQ9C0K7 418 aa18.79■□□□□ 0.6
PTPN18-202ENST00000347849 KNTC1P50748 2209 aa18.79■□□□□ 0.6
PTPN18-202ENST00000347849 LOC101059948A0A1B0GTJ6 334 aa18.79■□□□□ 0.6
PTPN18-202ENST00000347849 WIPF3A6NGB9 483 aa18.79■□□□□ 0.6
PTPN18-202ENST00000347849 NPIPB13A6NJU9 1138 aa18.79■□□□□ 0.6
PTPN18-202ENST00000347849 NPIPB4C9JG80 1138 aa18.79■□□□□ 0.6
PTPN18-202ENST00000347849 LDLRAD4O15165 306 aa18.79■□□□□ 0.6
PTPN18-202ENST00000347849 ERCC1P07992 297 aaPredicted RBP18.79■□□□□ 0.6
PTPN18-202ENST00000347849 PGAM2P15259 253 aa18.79■□□□□ 0.6
PTPN18-202ENST00000347849 SRSF3P84103 164 aaKnown RBP18.79■□□□□ 0.6
PTPN18-202ENST00000347849 MEF2DQ14814 521 aa18.79■□□□□ 0.6
PTPN18-202ENST00000347849 HFEQ30201 348 aa18.79■□□□□ 0.6
PTPN18-202ENST00000347849 TRAPPC6BQ86SZ2 158 aa18.79■□□□□ 0.6
PTPN18-202ENST00000347849 UEVLDQ8IX04 471 aa18.79■□□□□ 0.6
PTPN18-202ENST00000347849 ADAD2Q8NCV1 583 aaKnown RBP18.79■□□□□ 0.6
PTPN18-202ENST00000347849 C11orf40Q8WZ69 217 aa18.79■□□□□ 0.6
PTPN18-202ENST00000347849 LOXL4Q96JB6 756 aa18.79■□□□□ 0.6
PTPN18-202ENST00000347849 KLHL13Q9P2N7 655 aa18.79■□□□□ 0.6
PTPN18-202ENST00000347849 CACNA1HO95180 2353 aa18.78■□□□□ 0.6
PTPN18-202ENST00000347849 IGHV3-15A0A0B4J1V0 119 aa18.78■□□□□ 0.6
PTPN18-202ENST00000347849 C5orf51A6NDU8 294 aa18.78■□□□□ 0.6
PTPN18-202ENST00000347849 EIF1AYO14602 144 aaKnown RBP18.78■□□□□ 0.6
PTPN18-202ENST00000347849 HLA-GP17693 338 aa18.78■□□□□ 0.6
PTPN18-202ENST00000347849 EIF1AXP47813 144 aaKnown RBP18.78■□□□□ 0.6
PTPN18-202ENST00000347849 F8W036 122 aa18.78■□□□□ 0.6
PTPN18-202ENST00000347849 F12P00748 615 aaPredicted RBP18.78■□□□□ 0.6
PTPN18-202ENST00000347849 ZNF823P16415 610 aa18.78■□□□□ 0.6
PTPN18-202ENST00000347849 CDAP32320 146 aa18.78■□□□□ 0.6
PTPN18-202ENST00000347849 EIF1P41567 113 aaKnown RBP18.78■□□□□ 0.6
PTPN18-202ENST00000347849 BLOC1S1P78537 153 aa18.78■□□□□ 0.6
PTPN18-202ENST00000347849 SCRN3Q0VDG4 424 aa18.78■□□□□ 0.6
PTPN18-202ENST00000347849 RAET1LQ5VY80 246 aa18.78■□□□□ 0.6
PTPN18-202ENST00000347849 DHRS13Q6UX07 377 aa18.78■□□□□ 0.6
PTPN18-202ENST00000347849 GDF2Q9UK05 429 aaPredicted RBP18.78■□□□□ 0.6
PTPN18-202ENST00000347849 HHLA2Q9UM44 414 aa18.78■□□□□ 0.6
PTPN18-202ENST00000347849 MEGF11A6BM72 1044 aa18.77■□□□□ 0.6
PTPN18-202ENST00000347849 ACTL6AO96019 429 aa18.77■□□□□ 0.6
PTPN18-202ENST00000347849 ADH6P28332 368 aa18.77■□□□□ 0.6
PTPN18-202ENST00000347849 FOXRED1Q96CU9 486 aaPredicted RBP18.77■□□□□ 0.6
PTPN18-202ENST00000347849 P4HTMQ9NXG6 502 aa18.77■□□□□ 0.6
PTPN18-202ENST00000347849 ZNF629Q9UEG4 869 aaPredicted RBP18.77■□□□□ 0.6
PTPN18-202ENST00000347849 ZNF107Q9UII5 783 aaPredicted RBP18.77■□□□□ 0.6
PTPN18-202ENST00000347849 SRSF10O75494 262 aaKnown RBP18.77■□□□□ 0.59
PTPN18-202ENST00000347849 IL2RAP01589 272 aa18.77■□□□□ 0.59
PTPN18-202ENST00000347849 PGA4P0DJD7 388 aa18.77■□□□□ 0.59
PTPN18-202ENST00000347849 PGA3P0DJD8 388 aa18.77■□□□□ 0.59
PTPN18-202ENST00000347849 FSTP19883 344 aa18.77■□□□□ 0.59
PTPN18-202ENST00000347849 PVALBP20472 110 aaPredicted RBP18.77■□□□□ 0.59
PTPN18-202ENST00000347849 PCK2Q16822 640 aa18.77■□□□□ 0.59
PTPN18-202ENST00000347849 TMPPEQ6ZT21 453 aa18.77■□□□□ 0.59
PTPN18-202ENST00000347849 ARMC10Q8N2F6 343 aa18.77■□□□□ 0.59
PTPN18-202ENST00000347849 NUDCD2Q8WVJ2 157 aa18.77■□□□□ 0.59
PTPN18-202ENST00000347849 AQP3Q92482 292 aa18.77■□□□□ 0.59
PTPN18-202ENST00000347849 FAM46BQ96A09 425 aa18.77■□□□□ 0.59
PTPN18-202ENST00000347849 PIK3IP1Q96FE7 263 aa18.77■□□□□ 0.59
PTPN18-202ENST00000347849 A0A0A6YYH2 397 aa18.76■□□□□ 0.59
PTPN18-202ENST00000347849 METTL21EPA6NDL7 271 aa18.76■□□□□ 0.59
PTPN18-202ENST00000347849 A6NJ64 397 aa18.76■□□□□ 0.59
PTPN18-202ENST00000347849 HOXA1P49639 335 aaPredicted RBP18.76■□□□□ 0.59
PTPN18-202ENST00000347849 GPR85P60893 370 aa18.76■□□□□ 0.59
PTPN18-202ENST00000347849 ZNF260Q3ZCT1 412 aa18.76■□□□□ 0.59
PTPN18-202ENST00000347849 ZNF813Q6ZN06 617 aa18.76■□□□□ 0.59
PTPN18-202ENST00000347849 SELENOIQ9C0D9 397 aa18.76■□□□□ 0.59
PTPN18-202ENST00000347849 TLNRD1Q9H1K6 362 aa18.76■□□□□ 0.59
PTPN18-202ENST00000347849 CENPMQ9NSP4 180 aa18.76■□□□□ 0.59
PTPN18-202ENST00000347849 SLC2A8Q9NY64 477 aa18.76■□□□□ 0.59
PTPN18-202ENST00000347849 CSAG2Q9Y5P2 127 aa18.76■□□□□ 0.59
PTPN18-202ENST00000347849 RAB27BO00194 218 aa18.76■□□□□ 0.59
PTPN18-202ENST00000347849 CD37P11049 281 aa18.76■□□□□ 0.59
PTPN18-202ENST00000347849 PSMB6P28072 239 aa18.76■□□□□ 0.59
PTPN18-202ENST00000347849 HRH1P35367 487 aa18.76■□□□□ 0.59
PTPN18-202ENST00000347849 SSPNQ14714 243 aa18.76■□□□□ 0.59
PTPN18-202ENST00000347849 CDCP2Q5VXM1 449 aa18.76■□□□□ 0.59
PTPN18-202ENST00000347849 DNM1P34Q6PK57 102 aa18.76■□□□□ 0.59
PTPN18-202ENST00000347849 UCN2Q96RP3 112 aa18.76■□□□□ 0.59
PTPN18-202ENST00000347849 LOC107986453A0A1B0GWG9 222 aa18.75■□□□□ 0.59
PTPN18-202ENST00000347849 AQP7P3A6NL99 342 aa18.75■□□□□ 0.59
PTPN18-202ENST00000347849 EFSO43281 561 aa18.75■□□□□ 0.59
PTPN18-202ENST00000347849 FGF16O43320 207 aa18.75■□□□□ 0.59
PTPN18-202ENST00000347849 OR10S1Q8NGN2 331 aa18.75■□□□□ 0.59
PTPN18-202ENST00000347849 SLC25A43Q8WUT9 341 aaPredicted RBP18.75■□□□□ 0.59
PTPN18-202ENST00000347849 PSMF1Q92530 271 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms