RNA–Protein interactions for RNA: ENST00000347559.6

LMNA-201, Transcript of lamin A/C, humanhuman

TSL 5 BASIC

Gene LMNA, Length 3,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-201ENST00000347559 RFNGQ9Y644 331 aa13.63□□□□□ -0.23
LMNA-201ENST00000347559 RNH1P13489 461 aaKnown RBP13.62□□□□□ -0.23
LMNA-201ENST00000347559 FPR2P25090 351 aa13.62□□□□□ -0.23
LMNA-201ENST00000347559 IL15RAQ13261 267 aa13.62□□□□□ -0.23
LMNA-201ENST00000347559 ACKR1Q16570 336 aa13.62□□□□□ -0.23
LMNA-201ENST00000347559 HAGHQ16775 308 aa13.62□□□□□ -0.23
LMNA-201ENST00000347559 EMC4Q5J8M3 183 aa13.62□□□□□ -0.23
LMNA-201ENST00000347559 PLXDC2Q6UX71 529 aa13.62□□□□□ -0.23
LMNA-201ENST00000347559 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.62□□□□□ -0.23
LMNA-201ENST00000347559 FAM160A2Q8N612 972 aaPredicted RBP13.62□□□□□ -0.23
LMNA-201ENST00000347559 C8orf44Q96CB5 159 aa13.62□□□□□ -0.23
LMNA-201ENST00000347559 YPEL4Q96NS1 127 aa13.62□□□□□ -0.23
LMNA-201ENST00000347559 LYRM4Q9HD34 91 aa13.62□□□□□ -0.23
LMNA-201ENST00000347559 SERGEFQ9UGK8 458 aa13.62□□□□□ -0.23
LMNA-201ENST00000347559 COA3Q9Y2R0 106 aaPredicted RBP13.62□□□□□ -0.23
LMNA-201ENST00000347559 ATG2BQ96BY7 2078 aa13.62□□□□□ -0.23
LMNA-201ENST00000347559 BORCS7-ASMTA0A0B4J1R7 106 aa13.62□□□□□ -0.23
LMNA-201ENST00000347559 SMCO3A2RU48 225 aa13.62□□□□□ -0.23
LMNA-201ENST00000347559 C17orf51A8MQB3 221 aa13.62□□□□□ -0.23
LMNA-201ENST00000347559 DIRAS3O95661 229 aa13.62□□□□□ -0.23
LMNA-201ENST00000347559 NUDT14O95848 222 aa13.62□□□□□ -0.23
LMNA-201ENST00000347559 TMEM156Q8N614 296 aa13.62□□□□□ -0.23
LMNA-201ENST00000347559 TM4SF19Q96DZ7 209 aa13.62□□□□□ -0.23
LMNA-201ENST00000347559 VSTM2LQ96N03 204 aa13.62□□□□□ -0.23
LMNA-201ENST00000347559 C2orf88Q9BSF0 95 aa13.62□□□□□ -0.23
LMNA-201ENST00000347559 TIMM29Q9BSF4 260 aa13.62□□□□□ -0.23
LMNA-201ENST00000347559 RNF186Q9NXI6 227 aa13.62□□□□□ -0.23
LMNA-201ENST00000347559 A0A087WZY1 265 aa13.62□□□□□ -0.23
LMNA-201ENST00000347559 PRSS37A4D1T9 235 aa13.62□□□□□ -0.23
LMNA-201ENST00000347559 MASP2O00187 686 aa13.62□□□□□ -0.23
LMNA-201ENST00000347559 ZNF217O75362 1048 aa13.62□□□□□ -0.23
LMNA-201ENST00000347559 IFNA10P01566 189 aa13.62□□□□□ -0.23
LMNA-201ENST00000347559 GLI4P10075 376 aa13.62□□□□□ -0.23
LMNA-201ENST00000347559 PPM1AP35813 382 aa13.62□□□□□ -0.23
LMNA-201ENST00000347559 INSM1Q01101 510 aaPredicted RBP13.62□□□□□ -0.23
LMNA-201ENST00000347559 PLAC9Q5JTB6 97 aa13.62□□□□□ -0.23
LMNA-201ENST00000347559 Q7L0L9 218 aa13.62□□□□□ -0.23
LMNA-201ENST00000347559 DCXRQ7Z4W1 244 aa13.62□□□□□ -0.23
LMNA-201ENST00000347559 CA13Q8N1Q1 262 aa13.62□□□□□ -0.23
LMNA-201ENST00000347559 SLC22A24Q8N4F4 322 aa13.62□□□□□ -0.23
LMNA-201ENST00000347559 OR9A4Q8NGU2 314 aa13.62□□□□□ -0.23
LMNA-201ENST00000347559 OR52N5Q8NH56 324 aa13.62□□□□□ -0.23
LMNA-201ENST00000347559 WFIKKN2Q8TEU8 576 aa13.62□□□□□ -0.23
LMNA-201ENST00000347559 ADAT3Q96EY9 351 aaPredicted RBP13.62□□□□□ -0.23
LMNA-201ENST00000347559 WDR92Q96MX6 357 aa13.62□□□□□ -0.23
LMNA-201ENST00000347559 NEU1Q99519 415 aa13.62□□□□□ -0.23
LMNA-201ENST00000347559 LMF2Q9BU23 707 aaKnown RBP13.62□□□□□ -0.23
LMNA-201ENST00000347559 C8orf33Q9H7E9 229 aaPredicted RBP13.62□□□□□ -0.23
LMNA-201ENST00000347559 WFDC1Q9HC57 220 aa13.62□□□□□ -0.23
LMNA-201ENST00000347559 DEC1Q9P2X7 70 aa13.62□□□□□ -0.23
LMNA-201ENST00000347559 SLCO1B1Q9Y6L6 691 aa13.62□□□□□ -0.23
LMNA-201ENST00000347559 R4GMQ9 66 aa13.62□□□□□ -0.23
LMNA-201ENST00000347559 LOC390937A0A1W2PQ73 354 aa13.61□□□□□ -0.23
LMNA-201ENST00000347559 BCAT2O15382 392 aaPredicted RBP13.61□□□□□ -0.23
LMNA-201ENST00000347559 DEDDO75618 318 aa13.61□□□□□ -0.23
LMNA-201ENST00000347559 RAD51DO75771 328 aa13.61□□□□□ -0.23
LMNA-201ENST00000347559 TRGC1P0CF51 173 aa13.61□□□□□ -0.23
LMNA-201ENST00000347559 MDKP21741 143 aaPredicted RBP13.61□□□□□ -0.23
LMNA-201ENST00000347559 CCL20P78556 96 aa13.61□□□□□ -0.23
LMNA-201ENST00000347559 SP3Q02447 781 aa13.61□□□□□ -0.23
LMNA-201ENST00000347559 NFATC4Q14934 902 aa13.61□□□□□ -0.23
LMNA-201ENST00000347559 GGNBP1Q5YKI7 109 aa13.61□□□□□ -0.23
LMNA-201ENST00000347559 COMMD2Q86X83 199 aa13.61□□□□□ -0.23
LMNA-201ENST00000347559 FAM3CQ92520 227 aa13.61□□□□□ -0.23
LMNA-201ENST00000347559 MRPL24Q96A35 216 aaKnown RBP13.61□□□□□ -0.23
LMNA-201ENST00000347559 SCGB3A2Q96PL1 93 aa13.61□□□□□ -0.23
LMNA-201ENST00000347559 FOXQ1Q9C009 403 aa13.61□□□□□ -0.23
LMNA-201ENST00000347559 SLC35E2P0CK97 266 aa13.61□□□□□ -0.23
LMNA-201ENST00000347559 CXCR1P25024 350 aa13.61□□□□□ -0.23
LMNA-201ENST00000347559 IL2RGP31785 369 aa13.61□□□□□ -0.23
LMNA-201ENST00000347559 VIPR2P41587 438 aa13.61□□□□□ -0.23
LMNA-201ENST00000347559 DLK1P80370 383 aa13.61□□□□□ -0.23
LMNA-201ENST00000347559 GLIPR1L1Q6UWM5 242 aa13.61□□□□□ -0.23
LMNA-201ENST00000347559 MAMDC2Q7Z304 686 aaPredicted RBP13.61□□□□□ -0.23
LMNA-201ENST00000347559 PEG10Q86TG7 708 aaKnown RBP13.61□□□□□ -0.23
LMNA-201ENST00000347559 GPBAR1Q8TDU6 330 aa13.61□□□□□ -0.23
LMNA-201ENST00000347559 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.61□□□□□ -0.23
LMNA-201ENST00000347559 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.61□□□□□ -0.232e-6■□□□□ 9.5
LMNA-201ENST00000347559 CNTRLQ7Z7A1 2325 aa13.61□□□□□ -0.23
LMNA-201ENST00000347559 A0A0A6YYD4 124 aa13.6□□□□□ -0.23
LMNA-201ENST00000347559 ZNF705GA8MUZ8 300 aaPredicted RBP13.6□□□□□ -0.23
LMNA-201ENST00000347559 ADH1CP00326 375 aa13.6□□□□□ -0.23
LMNA-201ENST00000347559 CT45A8P0DMV1 189 aa13.6□□□□□ -0.23
LMNA-201ENST00000347559 CT45A9P0DMV2 189 aa13.6□□□□□ -0.23
LMNA-201ENST00000347559 COX5BP10606 129 aa13.6□□□□□ -0.23
LMNA-201ENST00000347559 CTNNB1P35222 781 aa13.6□□□□□ -0.23
LMNA-201ENST00000347559 AFF3P51826 1226 aaKnown RBP13.6□□□□□ -0.23
LMNA-201ENST00000347559 BTG2P78543 158 aa13.6□□□□□ -0.23
LMNA-201ENST00000347559 ACY1Q03154 408 aa13.6□□□□□ -0.23
LMNA-201ENST00000347559 ROM1Q03395 351 aa13.6□□□□□ -0.23
LMNA-201ENST00000347559 SGCGQ13326 291 aa13.6□□□□□ -0.23
LMNA-201ENST00000347559 DEFB110Q30KQ9 67 aa13.6□□□□□ -0.23
LMNA-201ENST00000347559 CT45A2Q5DJT8 189 aa13.6□□□□□ -0.23
LMNA-201ENST00000347559 HIST2H3PS2Q5TEC6 136 aa13.6□□□□□ -0.23
LMNA-201ENST00000347559 CCL4L1Q8NHW4 92 aa13.6□□□□□ -0.23
LMNA-201ENST00000347559 FRZBQ92765 325 aa13.6□□□□□ -0.23
LMNA-201ENST00000347559 ARHGAP5-AS1Q96IT6 56 aa13.6□□□□□ -0.23
LMNA-201ENST00000347559 ZFYVE21Q9BQ24 234 aa13.6□□□□□ -0.23
LMNA-201ENST00000347559 ZNF700Q9H0M5 742 aa13.6□□□□□ -0.23
LMNA-201ENST00000347559 C14orf166Q9Y224 244 aaKnown RBP13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms