RNA–Protein interactions for RNA: ENST00000346213.8

RAB5C-201, Transcript of RAB5C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5C, Length 1,671 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-201ENST00000346213 ABHD4Q8TB40 342 aa13.69□□□□□ -0.22
RAB5C-201ENST00000346213 FNDC8Q8TC99 324 aa13.69□□□□□ -0.22
RAB5C-201ENST00000346213 HAVCR2Q8TDQ0 301 aa13.69□□□□□ -0.22
RAB5C-201ENST00000346213 PGLYRP3Q96LB9 341 aa13.69□□□□□ -0.22
RAB5C-201ENST00000346213 DCLRE1CQ96SD1 692 aaKnown RBP13.69□□□□□ -0.22
RAB5C-201ENST00000346213 INTS14Q96SY0 518 aa13.69□□□□□ -0.22
RAB5C-201ENST00000346213 KCNN2Q9H2S1 579 aa13.69□□□□□ -0.22
RAB5C-201ENST00000346213 TMEM14AQ9Y6G1 99 aa13.69□□□□□ -0.22
RAB5C-201ENST00000346213 JMJD1CQ15652 2540 aa13.68□□□□□ -0.22
RAB5C-201ENST00000346213 TVP23AA6NH52 213 aa13.68□□□□□ -0.22
RAB5C-201ENST00000346213 PHYHO14832 338 aa13.68□□□□□ -0.22
RAB5C-201ENST00000346213 DOK2O60496 412 aa13.68□□□□□ -0.22
RAB5C-201ENST00000346213 NR2C1P13056 603 aa13.68□□□□□ -0.22
RAB5C-201ENST00000346213 USF1P22415 310 aaPredicted RBP13.68□□□□□ -0.22
RAB5C-201ENST00000346213 GIFP27352 417 aa13.68□□□□□ -0.22
RAB5C-201ENST00000346213 TGM4P49221 684 aa13.68□□□□□ -0.22
RAB5C-201ENST00000346213 PRSS12P56730 875 aa13.68□□□□□ -0.22
RAB5C-201ENST00000346213 DSCR9P59020 149 aa13.68□□□□□ -0.22
RAB5C-201ENST00000346213 C16orf87Q6PH81 154 aa13.68□□□□□ -0.22
RAB5C-201ENST00000346213 LINC00346Q8IVM7 164 aa13.68□□□□□ -0.22
RAB5C-201ENST00000346213 OR10S1Q8NGN2 331 aa13.68□□□□□ -0.22
RAB5C-201ENST00000346213 SYNPRQ8TBG9 265 aa13.68□□□□□ -0.22
RAB5C-201ENST00000346213 RPS4Y2Q8TD47 263 aa13.68□□□□□ -0.22
RAB5C-201ENST00000346213 KLF14Q8TD94 323 aaPredicted RBP13.68□□□□□ -0.22
RAB5C-201ENST00000346213 TTTY10Q9BZA0 68 aa13.68□□□□□ -0.22
RAB5C-201ENST00000346213 RAB1BQ9H0U4 201 aa13.68□□□□□ -0.22
RAB5C-201ENST00000346213 C1orf198Q9H425 327 aa13.68□□□□□ -0.22
RAB5C-201ENST00000346213 PNRC2Q9NPJ4 139 aaKnown RBP13.68□□□□□ -0.22
RAB5C-201ENST00000346213 GNG8Q9UK08 70 aa13.68□□□□□ -0.22
RAB5C-201ENST00000346213 A0A1B0GVG6 124 aa13.67□□□□□ -0.22
RAB5C-201ENST00000346213 LOC390937A0A1W2PQ73 354 aa13.67□□□□□ -0.22
RAB5C-201ENST00000346213 MAGEB4O15481 346 aaPredicted RBP13.67□□□□□ -0.22
RAB5C-201ENST00000346213 SC5DO75845 299 aa13.67□□□□□ -0.22
RAB5C-201ENST00000346213 TACSTD2P09758 323 aa13.67□□□□□ -0.22
RAB5C-201ENST00000346213 CLEC2LP0C7M8 214 aa13.67□□□□□ -0.22
RAB5C-201ENST00000346213 ALOX5APP20292 161 aa13.67□□□□□ -0.22
RAB5C-201ENST00000346213 CD40LGP29965 261 aa13.67□□□□□ -0.22
RAB5C-201ENST00000346213 ETV6P41212 452 aa13.67□□□□□ -0.22
RAB5C-201ENST00000346213 GDI2P50395 445 aaKnown RBP13.67□□□□□ -0.22
RAB5C-201ENST00000346213 KLF3P57682 345 aaPredicted RBP13.67□□□□□ -0.22
RAB5C-201ENST00000346213 RPS23P62266 143 aaKnown RBP13.67□□□□□ -0.22
RAB5C-201ENST00000346213 ZNF45Q02386 682 aa13.67□□□□□ -0.22
RAB5C-201ENST00000346213 MXD1Q05195 221 aa13.67□□□□□ -0.22
RAB5C-201ENST00000346213 SLC3A1Q07837 685 aa13.67□□□□□ -0.22
RAB5C-201ENST00000346213 MRPL28Q13084 256 aaKnown RBP13.67□□□□□ -0.22
RAB5C-201ENST00000346213 DNM1P34Q6PK57 102 aa13.67□□□□□ -0.22
RAB5C-201ENST00000346213 Q6ZR03 302 aa13.67□□□□□ -0.22
RAB5C-201ENST00000346213 OR6N2Q8NGY6 317 aa13.67□□□□□ -0.22
RAB5C-201ENST00000346213 UBASH3BQ8TF42 649 aa13.67□□□□□ -0.22
RAB5C-201ENST00000346213 SMIM19Q96E16 107 aa13.67□□□□□ -0.22
RAB5C-201ENST00000346213 C4orf45Q96LM5 186 aa13.67□□□□□ -0.22
RAB5C-201ENST00000346213 SMURF1Q9HCE7 757 aa13.67□□□□□ -0.22
RAB5C-201ENST00000346213 DCAF16Q9NXF7 216 aa13.67□□□□□ -0.22
RAB5C-201ENST00000346213 STARD10Q9Y365 291 aa13.67□□□□□ -0.22
RAB5C-201ENST00000346213 GRIP1Q9Y3R0 1128 aa13.67□□□□□ -0.22
RAB5C-201ENST00000346213 SPEF1Q9Y4P9 236 aa13.67□□□□□ -0.22
RAB5C-201ENST00000346213 C17orf100A8MU93 164 aa13.66□□□□□ -0.22
RAB5C-201ENST00000346213 PRR32B1ATL7 298 aa13.66□□□□□ -0.22
RAB5C-201ENST00000346213 SGCEO43556 437 aa13.66□□□□□ -0.22
RAB5C-201ENST00000346213 PFDN1O60925 122 aa13.66□□□□□ -0.22
RAB5C-201ENST00000346213 SULT1C4O75897 302 aa13.66□□□□□ -0.22
RAB5C-201ENST00000346213 SERPINA3P01011 423 aa13.66□□□□□ -0.22
RAB5C-201ENST00000346213 IGHV3-13P01766 116 aa13.66□□□□□ -0.22
RAB5C-201ENST00000346213 HTR5AP47898 357 aa13.66□□□□□ -0.22
RAB5C-201ENST00000346213 PPP5CP53041 499 aa13.66□□□□□ -0.22
RAB5C-201ENST00000346213 PPP1CBP62140 327 aa13.66□□□□□ -0.22
RAB5C-201ENST00000346213 CCL8P80075 99 aa13.66□□□□□ -0.22
RAB5C-201ENST00000346213 EGR3Q06889 387 aa13.66□□□□□ -0.22
RAB5C-201ENST00000346213 KRTAP27-1Q3LI81 207 aa13.66□□□□□ -0.22
RAB5C-201ENST00000346213 SYT9Q86SS6 491 aa13.66□□□□□ -0.22
RAB5C-201ENST00000346213 NEU4Q8WWR8 484 aaPredicted RBP13.66□□□□□ -0.22
RAB5C-201ENST00000346213 GHSRQ92847 366 aa13.66□□□□□ -0.22
RAB5C-201ENST00000346213 MSI2Q96DH6 328 aaKnown RBP13.66□□□□□ -0.22
RAB5C-201ENST00000346213 PIMREGQ9BSJ6 248 aa13.66□□□□□ -0.22
RAB5C-201ENST00000346213 BCL2L14Q9BZR8 327 aa13.66□□□□□ -0.22
RAB5C-201ENST00000346213 YAE1D1Q9NRH1 226 aa13.66□□□□□ -0.22
RAB5C-201ENST00000346213 ACOXLQ9NUZ1 547 aa13.66□□□□□ -0.22
RAB5C-201ENST00000346213 LAMP5Q9UJQ1 280 aa13.66□□□□□ -0.22
RAB5C-201ENST00000346213 KLHDC2Q9Y2U9 406 aa13.66□□□□□ -0.22
RAB5C-201ENST00000346213 CTDSP2O14595 271 aa13.66□□□□□ -0.22
RAB5C-201ENST00000346213 CSF3P09919 207 aa13.66□□□□□ -0.22
RAB5C-201ENST00000346213 RAD52P43351 418 aa13.66□□□□□ -0.22
RAB5C-201ENST00000346213 MTNR1BP49286 362 aa13.66□□□□□ -0.22
RAB5C-201ENST00000346213 LSM6P62312 80 aaKnown RBP13.66□□□□□ -0.22
RAB5C-201ENST00000346213 PSG7Q13046 419 aa13.66□□□□□ -0.22
RAB5C-201ENST00000346213 INSL4Q14641 139 aa13.66□□□□□ -0.22
RAB5C-201ENST00000346213 MBNL2Q5VZF2 373 aaKnown RBP13.66□□□□□ -0.22
RAB5C-201ENST00000346213 SLC18B1Q6NT16 456 aa13.66□□□□□ -0.22
RAB5C-201ENST00000346213 DPY19L4Q7Z388 723 aa13.66□□□□□ -0.22
RAB5C-201ENST00000346213 CCDC190Q86UF4 302 aa13.66□□□□□ -0.22
RAB5C-201ENST00000346213 NAA40Q86UY6 237 aa13.66□□□□□ -0.22
RAB5C-201ENST00000346213 OR1J2Q8NGS2 313 aa13.66□□□□□ -0.22
RAB5C-201ENST00000346213 OTOSQ8NHW6 89 aa13.66□□□□□ -0.22
RAB5C-201ENST00000346213 MAP6Q96JE9 813 aa13.66□□□□□ -0.22
RAB5C-201ENST00000346213 OCEL1Q9H607 264 aa13.66□□□□□ -0.22
RAB5C-201ENST00000346213 ZNF275Q9NSD4 429 aaPredicted RBP13.66□□□□□ -0.22
RAB5C-201ENST00000346213 PLEK2Q9NYT0 353 aa13.66□□□□□ -0.22
RAB5C-201ENST00000346213 TRBV2A0A0J9YWF9 115 aa13.65□□□□□ -0.22
RAB5C-201ENST00000346213 SHISA3A0PJX4 238 aa13.65□□□□□ -0.22
RAB5C-201ENST00000346213 NDUFS8O00217 210 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms