RNA–Protein interactions for RNA: ENST00000345512.7

PTPRU-201, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRU, Length 4,470 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-201ENST00000345512 RAB18Q9NP72 206 aa13.86□□□□□ -0.19
PTPRU-201ENST00000345512 KLK13Q9UKR3 277 aa13.86□□□□□ -0.19
PTPRU-201ENST00000345512 FPR2P25090 351 aa13.86□□□□□ -0.19
PTPRU-201ENST00000345512 RAB13P51153 203 aa13.86□□□□□ -0.19
PTPRU-201ENST00000345512 SP6Q3SY56 376 aa13.86□□□□□ -0.19
PTPRU-201ENST00000345512 OR5T1Q8NG75 326 aa13.86□□□□□ -0.19
PTPRU-201ENST00000345512 SLC25A43Q8WUT9 341 aaPredicted RBP13.86□□□□□ -0.19
PTPRU-201ENST00000345512 MITD1Q8WV92 249 aa13.86□□□□□ -0.19
PTPRU-201ENST00000345512 PAPOLGQ9BWT3 736 aaKnown RBP13.86□□□□□ -0.19
PTPRU-201ENST00000345512 IGKV1D-42A0A075B6H8 117 aa13.86□□□□□ -0.19
PTPRU-201ENST00000345512 LOC102725191A0A1B0GVB3 256 aa13.86□□□□□ -0.19
PTPRU-201ENST00000345512 ANKUB1A6NFN9 424 aa13.86□□□□□ -0.19
PTPRU-201ENST00000345512 OR2J2O76002 312 aa13.86□□□□□ -0.19
PTPRU-201ENST00000345512 NXPH3O95157 252 aa13.86□□□□□ -0.19
PTPRU-201ENST00000345512 IFNA1P01562 189 aa13.86□□□□□ -0.19
PTPRU-201ENST00000345512 CD37P11049 281 aa13.86□□□□□ -0.19
PTPRU-201ENST00000345512 ALDH3B1P43353 468 aa13.86□□□□□ -0.19
PTPRU-201ENST00000345512 PIGPP57054 158 aa13.86□□□□□ -0.19
PTPRU-201ENST00000345512 C2orf68Q2NKX9 166 aa13.86□□□□□ -0.19
PTPRU-201ENST00000345512 MOGAT2Q3SYC2 334 aa13.86□□□□□ -0.19
PTPRU-201ENST00000345512 WDSUB1Q8N9V3 476 aa13.86□□□□□ -0.19
PTPRU-201ENST00000345512 ZNF784Q8NCA9 323 aaPredicted RBP13.86□□□□□ -0.19
PTPRU-201ENST00000345512 A0A087WV48 116 aa13.85□□□□□ -0.19
PTPRU-201ENST00000345512 OR2M5A3KFT3 312 aa13.85□□□□□ -0.19
PTPRU-201ENST00000345512 SYNGR4O95473 234 aa13.85□□□□□ -0.19
PTPRU-201ENST00000345512 POU2F2P09086 479 aa13.85□□□□□ -0.19
PTPRU-201ENST00000345512 S100PP25815 95 aa13.85□□□□□ -0.19
PTPRU-201ENST00000345512 PNLIPRP3Q17RR3 467 aa13.85□□□□□ -0.19
PTPRU-201ENST00000345512 AAED1Q7RTV5 226 aa13.85□□□□□ -0.19
PTPRU-201ENST00000345512 PLPP5Q8NEB5 264 aa13.85□□□□□ -0.19
PTPRU-201ENST00000345512 HAS2Q92819 552 aa13.85□□□□□ -0.19
PTPRU-201ENST00000345512 UQCC1Q9NVA1 299 aa13.85□□□□□ -0.19
PTPRU-201ENST00000345512 TRBV5-7A0A0A0MS05 114 aa13.85□□□□□ -0.19
PTPRU-201ENST00000345512 TO15178 435 aa13.85□□□□□ -0.19
PTPRU-201ENST00000345512 SOCS1O15524 211 aa13.85□□□□□ -0.19
PTPRU-201ENST00000345512 PRSS54Q6PEW0 395 aa13.85□□□□□ -0.19
PTPRU-201ENST00000345512 CCDC54Q8NEL0 328 aa13.85□□□□□ -0.19
PTPRU-201ENST00000345512 OR2G3Q8NGZ4 309 aa13.85□□□□□ -0.19
PTPRU-201ENST00000345512 MRGPRX4Q96LA9 322 aa13.85□□□□□ -0.19
PTPRU-201ENST00000345512 HEXA-AS1Q9H8Q6 139 aa13.85□□□□□ -0.19
PTPRU-201ENST00000345512 RP1L1Q8IWN7 2480 aaPredicted RBP13.85□□□□□ -0.19
PTPRU-201ENST00000345512 ANGPTL7O43827 346 aa13.85□□□□□ -0.19
PTPRU-201ENST00000345512 EIF1BO60739 113 aaKnown RBP13.85□□□□□ -0.19
PTPRU-201ENST00000345512 VSIG8P0DPA2 414 aa13.85□□□□□ -0.19
PTPRU-201ENST00000345512 RAB5CP51148 216 aa13.85□□□□□ -0.19
PTPRU-201ENST00000345512 ZNF266Q14584 549 aa13.85□□□□□ -0.19
PTPRU-201ENST00000345512 EIF2S3LQ2VIR3 472 aaKnown RBP13.85□□□□□ -0.19
PTPRU-201ENST00000345512 RPL7L1Q6DKI1 246 aaKnown RBP13.85□□□□□ -0.19
PTPRU-201ENST00000345512 RTN4IP1Q8WWV3 396 aaPredicted RBP13.85□□□□□ -0.19
PTPRU-201ENST00000345512 TDRD6O60522 2096 aaKnown RBP13.84□□□□□ -0.19
PTPRU-201ENST00000345512 KISS1Q15726 138 aa13.84□□□□□ -0.19
PTPRU-201ENST00000345512 FAHD2BQ6P2I3 314 aaPredicted RBP13.84□□□□□ -0.19
PTPRU-201ENST00000345512 SLC22A25Q6T423 547 aa13.84□□□□□ -0.19
PTPRU-201ENST00000345512 CLEC18BQ6UXF7 455 aa13.84□□□□□ -0.19
PTPRU-201ENST00000345512 OR1L3Q8NH93 324 aa13.84□□□□□ -0.19
PTPRU-201ENST00000345512 CPNE4Q96A23 557 aaPredicted RBP13.84□□□□□ -0.19
PTPRU-201ENST00000345512 FAHD2AQ96GK7 314 aa13.84□□□□□ -0.19
PTPRU-201ENST00000345512 OXGR1Q96P68 337 aa13.84□□□□□ -0.19
PTPRU-201ENST00000345512 OR5B12Q96R08 314 aa13.84□□□□□ -0.19
PTPRU-201ENST00000345512 PLEKHA2Q9HB19 425 aa13.84□□□□□ -0.19
PTPRU-201ENST00000345512 GBF1Q92538 1859 aa13.84□□□□□ -0.19
PTPRU-201ENST00000345512 RTTNQ86VV8 2226 aa13.84□□□□□ -0.19
PTPRU-201ENST00000345512 MBTPS2O43462 519 aa13.84□□□□□ -0.19
PTPRU-201ENST00000345512 TXNDC12O95881 172 aa13.84□□□□□ -0.19
PTPRU-201ENST00000345512 F12P00748 615 aaPredicted RBP13.84□□□□□ -0.19
PTPRU-201ENST00000345512 CD79AP11912 226 aa13.84□□□□□ -0.19
PTPRU-201ENST00000345512 RPL23AP62750 156 aaKnown RBP13.84□□□□□ -0.19
PTPRU-201ENST00000345512 MKXQ8IYA7 352 aa13.84□□□□□ -0.19
PTPRU-201ENST00000345512 KIRREL1Q96J84 757 aa13.84□□□□□ -0.19
PTPRU-201ENST00000345512 OR51B6Q9H340 312 aa13.84□□□□□ -0.19
PTPRU-201ENST00000345512 NPTNQ9Y639 398 aa13.84□□□□□ -0.19
PTPRU-201ENST00000345512 E5RGE8 158 aa13.84□□□□□ -0.19
PTPRU-201ENST00000345512 HYAL1Q12794 435 aa13.84□□□□□ -0.19
PTPRU-201ENST00000345512 ZNF684Q5T5D7 378 aa13.84□□□□□ -0.19
PTPRU-201ENST00000345512 RPUSD3Q6P087 351 aaKnown RBP13.84□□□□□ -0.19
PTPRU-201ENST00000345512 SP7Q8TDD2 431 aaPredicted RBP13.84□□□□□ -0.19
PTPRU-201ENST00000345512 CFHR5Q9BXR6 569 aa13.84□□□□□ -0.19
PTPRU-201ENST00000345512 NSG2Q9Y328 171 aa13.84□□□□□ -0.19
PTPRU-201ENST00000345512 CASP8AP2Q9UKL3 1982 aa13.84□□□□□ -0.19
PTPRU-201ENST00000345512 LMO7DNF2Z398 122 aa13.84□□□□□ -0.19
PTPRU-201ENST00000345512 HPP00738 406 aa13.84□□□□□ -0.19
PTPRU-201ENST00000345512 TAGLN2P37802 199 aaKnown RBP13.84□□□□□ -0.19
PTPRU-201ENST00000345512 NDUFA6P56556 154 aa13.84□□□□□ -0.19
PTPRU-201ENST00000345512 KIAA0141Q14154 515 aaPredicted RBP13.84□□□□□ -0.19
PTPRU-201ENST00000345512 ZNF345Q14585 488 aa13.84□□□□□ -0.19
PTPRU-201ENST00000345512 GAB4Q2WGN9 574 aa13.84□□□□□ -0.19
PTPRU-201ENST00000345512 NOXO1Q8NFA2 376 aa13.84□□□□□ -0.19
PTPRU-201ENST00000345512 MRPS24Q96EL2 167 aaKnown RBP13.84□□□□□ -0.19
PTPRU-201ENST00000345512 PRRX2Q99811 253 aa13.84□□□□□ -0.19
PTPRU-201ENST00000345512 TP53BP1Q12888 1972 aaPredicted RBP13.84□□□□□ -0.19
PTPRU-201ENST00000345512 IGHV3-15A0A0B4J1V0 119 aa13.83□□□□□ -0.2
PTPRU-201ENST00000345512 SERPINE3A8MV23 424 aa13.83□□□□□ -0.2
PTPRU-201ENST00000345512 CDC14BO60729 498 aa13.83□□□□□ -0.2
PTPRU-201ENST00000345512 DUSP1P28562 367 aa13.83□□□□□ -0.2
PTPRU-201ENST00000345512 RBP2P50120 134 aa13.83□□□□□ -0.2
PTPRU-201ENST00000345512 SNRPEP62304 92 aaKnown RBP13.83□□□□□ -0.2
PTPRU-201ENST00000345512 PLXDC2Q6UX71 529 aa13.83□□□□□ -0.2
PTPRU-201ENST00000345512 Q7L0L9 218 aa13.83□□□□□ -0.2
PTPRU-201ENST00000345512 MAML2Q8IZL2 1156 aaPredicted RBP13.83□□□□□ -0.2
PTPRU-201ENST00000345512 RPS4Y2Q8TD47 263 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms