RNA–Protein interactions for RNA: ENST00000343765.6

VIPAS39-202, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,761 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-202ENST00000343765 KCNAB3O43448 404 aa13.08□□□□□ -0.32
VIPAS39-202ENST00000343765 B3GALNT1O75752 331 aa13.08□□□□□ -0.32
VIPAS39-202ENST00000343765 RLN2P04090 185 aa13.08□□□□□ -0.32
VIPAS39-202ENST00000343765 CHRM2P08172 466 aa13.08□□□□□ -0.32
VIPAS39-202ENST00000343765 NR2C1P13056 603 aa13.08□□□□□ -0.32
VIPAS39-202ENST00000343765 RPA2P15927 270 aa13.08□□□□□ -0.32
VIPAS39-202ENST00000343765 BAMBIQ13145 260 aa13.08□□□□□ -0.32
VIPAS39-202ENST00000343765 UBE2V2Q15819 145 aa13.08□□□□□ -0.32
VIPAS39-202ENST00000343765 OR2W3Q7Z3T1 314 aa13.08□□□□□ -0.32
VIPAS39-202ENST00000343765 NAXDQ8IW45 347 aa13.08□□□□□ -0.32
VIPAS39-202ENST00000343765 MAML2Q8IZL2 1156 aaPredicted RBP13.08□□□□□ -0.32
VIPAS39-202ENST00000343765 DTWD2Q8NBA8 298 aa13.08□□□□□ -0.32
VIPAS39-202ENST00000343765 RELL2Q8NC24 303 aaPredicted RBP13.08□□□□□ -0.32
VIPAS39-202ENST00000343765 OR14L1PQ8NHC6 308 aa13.08□□□□□ -0.32
VIPAS39-202ENST00000343765 PPP1R1CQ8WVI7 109 aa13.08□□□□□ -0.32
VIPAS39-202ENST00000343765 GUCD1Q96NT3 240 aa13.08□□□□□ -0.32
VIPAS39-202ENST00000343765 DMRTA2Q96SC8 542 aa13.08□□□□□ -0.32
VIPAS39-202ENST00000343765 ST6GALNAC5Q9BVH7 336 aa13.08□□□□□ -0.32
VIPAS39-202ENST00000343765 MYOZ1Q9NP98 299 aaPredicted RBP13.08□□□□□ -0.32
VIPAS39-202ENST00000343765 PIGLQ9Y2B2 252 aa13.08□□□□□ -0.32
VIPAS39-202ENST00000343765 M0R135 149 aa13.07□□□□□ -0.32
VIPAS39-202ENST00000343765 SHOXO15266 292 aa13.07□□□□□ -0.32
VIPAS39-202ENST00000343765 FCGR2AP12318 317 aa13.07□□□□□ -0.32
VIPAS39-202ENST00000343765 TRA2AQ13595 282 aaKnown RBP eCLIP13.07□□□□□ -0.32
VIPAS39-202ENST00000343765 RSPO1Q2MKA7 263 aaPredicted RBP13.07□□□□□ -0.32
VIPAS39-202ENST00000343765 C10orf128Q5T292 105 aa13.07□□□□□ -0.32
VIPAS39-202ENST00000343765 ZIC4Q8N9L1 334 aa13.07□□□□□ -0.32
VIPAS39-202ENST00000343765 PNLDC1Q8NA58 520 aaKnown RBP13.07□□□□□ -0.32
VIPAS39-202ENST00000343765 FBXO17Q96EF6 278 aa13.07□□□□□ -0.32
VIPAS39-202ENST00000343765 ZNF799Q96GE5 643 aa13.07□□□□□ -0.32
VIPAS39-202ENST00000343765 PHB2Q99623 299 aa13.07□□□□□ -0.32
VIPAS39-202ENST00000343765 PIGQQ9BRB3 760 aa13.07□□□□□ -0.32
VIPAS39-202ENST00000343765 SH2D2AQ9NP31 389 aa13.07□□□□□ -0.32
VIPAS39-202ENST00000343765 PRR13Q9NZ81 148 aa13.07□□□□□ -0.32
VIPAS39-202ENST00000343765 FBLN5Q9UBX5 448 aa13.07□□□□□ -0.32
VIPAS39-202ENST00000343765 C13orf42A0A1B0GVH6 325 aa13.07□□□□□ -0.32
VIPAS39-202ENST00000343765 PATE4P0C8F1 98 aa13.07□□□□□ -0.32
VIPAS39-202ENST00000343765 SNAI3Q3KNW1 292 aa13.07□□□□□ -0.32
VIPAS39-202ENST00000343765 MYO7BQ6PIF6 2116 aa13.07□□□□□ -0.32
VIPAS39-202ENST00000343765 ARMC10Q8N2F6 343 aa13.07□□□□□ -0.32
VIPAS39-202ENST00000343765 ZDHHC22Q8N966 263 aa13.07□□□□□ -0.32
VIPAS39-202ENST00000343765 OR2AE1Q8NHA4 323 aa13.07□□□□□ -0.32
VIPAS39-202ENST00000343765 OR10A2Q9H208 303 aa13.07□□□□□ -0.32
VIPAS39-202ENST00000343765 CBR3O75828 277 aa13.06□□□□□ -0.32
VIPAS39-202ENST00000343765 TRAPPC6AO75865 159 aa13.06□□□□□ -0.32
VIPAS39-202ENST00000343765 HTR3BO95264 441 aa13.06□□□□□ -0.32
VIPAS39-202ENST00000343765 PLATP00750 562 aa13.06□□□□□ -0.32
VIPAS39-202ENST00000343765 RFPL3SP0C7P2 107 aa13.06□□□□□ -0.32
VIPAS39-202ENST00000343765 MPGP29372 298 aa13.06□□□□□ -0.32
VIPAS39-202ENST00000343765 PTGFRP43088 359 aa13.06□□□□□ -0.32
VIPAS39-202ENST00000343765 STARP49675 285 aa13.06□□□□□ -0.32
VIPAS39-202ENST00000343765 RAC1P63000 192 aa13.06□□□□□ -0.32
VIPAS39-202ENST00000343765 ECH1Q13011 328 aa13.06□□□□□ -0.32
VIPAS39-202ENST00000343765 FAM74A1Q5RGS3 127 aa13.06□□□□□ -0.32
VIPAS39-202ENST00000343765 SIGIRRQ6IA17 410 aa13.06□□□□□ -0.32
VIPAS39-202ENST00000343765 OR56B1Q8NGI3 324 aa13.06□□□□□ -0.32
VIPAS39-202ENST00000343765 C17orf50Q8WW18 174 aa13.06□□□□□ -0.32
VIPAS39-202ENST00000343765 ROBO4Q8WZ75 1007 aa13.06□□□□□ -0.32
VIPAS39-202ENST00000343765 ALKBH3Q96Q83 286 aaPredicted RBP13.06□□□□□ -0.32
VIPAS39-202ENST00000343765 IER2Q9BTL4 223 aa13.06□□□□□ -0.32
VIPAS39-202ENST00000343765 URM1Q9BTM9 101 aaKnown RBP13.06□□□□□ -0.32
VIPAS39-202ENST00000343765 TTC28Q96AY4 2481 aa13.06□□□□□ -0.32
VIPAS39-202ENST00000343765 C5orf51A6NDU8 294 aa13.06□□□□□ -0.32
VIPAS39-202ENST00000343765 SDCBPO00560 298 aaPredicted RBP13.06□□□□□ -0.32
VIPAS39-202ENST00000343765 EFSO43281 561 aa13.06□□□□□ -0.32
VIPAS39-202ENST00000343765 DHRS3O75911 302 aa13.06□□□□□ -0.32
VIPAS39-202ENST00000343765 VAMP5O95183 116 aa13.06□□□□□ -0.32
VIPAS39-202ENST00000343765 P04436 131 aa13.06□□□□□ -0.32
VIPAS39-202ENST00000343765 GSTP1P09211 210 aaKnown RBP13.06□□□□□ -0.32
VIPAS39-202ENST00000343765 AMY2BP19961 511 aa13.06□□□□□ -0.32
VIPAS39-202ENST00000343765 GSK3AP49840 483 aa13.06□□□□□ -0.32
VIPAS39-202ENST00000343765 ZNF84P51523 738 aa13.06□□□□□ -0.32
VIPAS39-202ENST00000343765 Q0VFX4 171 aa13.06□□□□□ -0.32
VIPAS39-202ENST00000343765 TMEM65Q6PI78 240 aa13.06□□□□□ -0.32
VIPAS39-202ENST00000343765 MITD1Q8WV92 249 aa13.06□□□□□ -0.32
VIPAS39-202ENST00000343765 WBP1Q96G27 269 aa13.06□□□□□ -0.32
VIPAS39-202ENST00000343765 SNAPC5O75971 98 aa13.05□□□□□ -0.32
VIPAS39-202ENST00000343765 CD8AP01732 235 aa13.05□□□□□ -0.32
VIPAS39-202ENST00000343765 MGMTP16455 207 aa13.05□□□□□ -0.32
VIPAS39-202ENST00000343765 TCN2P20062 427 aa13.05□□□□□ -0.32
VIPAS39-202ENST00000343765 NTF4P34130 210 aa13.05□□□□□ -0.32
VIPAS39-202ENST00000343765 DLSTP36957 453 aa13.05□□□□□ -0.32
VIPAS39-202ENST00000343765 ARPC4P59998 168 aa13.05□□□□□ -0.32
VIPAS39-202ENST00000343765 RGS7BPQ6MZT1 257 aaPredicted RBP13.05□□□□□ -0.32
VIPAS39-202ENST00000343765 C11orf87Q6NUJ2 197 aa13.05□□□□□ -0.32
VIPAS39-202ENST00000343765 NAXEQ8NCW5 288 aa13.05□□□□□ -0.32
VIPAS39-202ENST00000343765 FBXW5Q969U6 566 aa13.05□□□□□ -0.32
VIPAS39-202ENST00000343765 NECAB3Q96P71 396 aaPredicted RBP13.05□□□□□ -0.32
VIPAS39-202ENST00000343765 WDR13Q9H1Z4 485 aa13.05□□□□□ -0.32
VIPAS39-202ENST00000343765 TECTAO75443 2155 aa13.05□□□□□ -0.32
VIPAS39-202ENST00000343765 TUBAL3A6NHL2 446 aa13.05□□□□□ -0.32
VIPAS39-202ENST00000343765 LGALS8O00214 317 aa13.05□□□□□ -0.32
VIPAS39-202ENST00000343765 BLVRBP30043 206 aaPredicted RBP13.05□□□□□ -0.32
VIPAS39-202ENST00000343765 FGL1Q08830 312 aa13.05□□□□□ -0.32
VIPAS39-202ENST00000343765 ZMYND11Q15326 602 aa13.05□□□□□ -0.32
VIPAS39-202ENST00000343765 SLC9A3R2Q15599 337 aa13.05□□□□□ -0.32
VIPAS39-202ENST00000343765 CRIP3Q6Q6R5 217 aa13.05□□□□□ -0.32
VIPAS39-202ENST00000343765 PPP1R32Q7Z5V6 425 aa13.05□□□□□ -0.32
VIPAS39-202ENST00000343765 SLC51BQ86UW2 128 aa13.05□□□□□ -0.32
VIPAS39-202ENST00000343765 HOGA1Q86XE5 327 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms