RNA–Protein interactions for RNA: ENST00000343060.4

HOXA1-201, Transcript of homeobox A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA1, Length 2,517 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1-201ENST00000343060 SFTPBP07988 381 aa8.55□□□□□ -1.04
HOXA1-201ENST00000343060 SELLP14151 372 aa8.55□□□□□ -1.04
HOXA1-201ENST00000343060 ZNF823P16415 610 aa8.55□□□□□ -1.04
HOXA1-201ENST00000343060 AMY2BP19961 511 aa8.55□□□□□ -1.04
HOXA1-201ENST00000343060 GLRA1P23415 457 aa8.55□□□□□ -1.04
HOXA1-201ENST00000343060 GNALP38405 381 aa8.55□□□□□ -1.04
HOXA1-201ENST00000343060 P2RY1P47900 373 aa8.55□□□□□ -1.04
HOXA1-201ENST00000343060 HSD11B2P80365 405 aa8.55□□□□□ -1.04
HOXA1-201ENST00000343060 TDGQ13569 410 aa8.55□□□□□ -1.04
HOXA1-201ENST00000343060 RPUSD3Q6P087 351 aaKnown RBP8.55□□□□□ -1.04
HOXA1-201ENST00000343060 DNM1P34Q6PK57 102 aa8.55□□□□□ -1.04
HOXA1-201ENST00000343060 ZNF383Q8NA42 475 aa8.55□□□□□ -1.04
HOXA1-201ENST00000343060 TMEM104Q8NE00 496 aa8.55□□□□□ -1.04
HOXA1-201ENST00000343060 OR13C9Q8NGT0 318 aa8.55□□□□□ -1.04
HOXA1-201ENST00000343060 ERGIC1Q969X5 290 aa8.55□□□□□ -1.04
HOXA1-201ENST00000343060 SLAMF9Q96A28 289 aa8.55□□□□□ -1.04
HOXA1-201ENST00000343060 BCO1Q9HAY6 547 aa8.55□□□□□ -1.04
HOXA1-201ENST00000343060 KCNJ16Q9NPI9 418 aa8.55□□□□□ -1.04
HOXA1-201ENST00000343060 GAR1Q9NY12 217 aaKnown RBP8.55□□□□□ -1.04
HOXA1-201ENST00000343060 TCFL5Q9UL49 500 aa8.55□□□□□ -1.04
HOXA1-201ENST00000343060 MRPS28Q9Y2Q9 187 aaKnown RBP8.55□□□□□ -1.04
HOXA1-201ENST00000343060 ARHGEF17Q96PE2 2063 aaPredicted RBP8.55□□□□□ -1.04
HOXA1-201ENST00000343060 A0A087WWC5 75 aa8.54□□□□□ -1.04
HOXA1-201ENST00000343060 A0A1W2PQD3 144 aa8.54□□□□□ -1.04
HOXA1-201ENST00000343060 A6NIZ1 184 aa8.54□□□□□ -1.04
HOXA1-201ENST00000343060 NPIPB13A6NJU9 1138 aa8.54□□□□□ -1.04
HOXA1-201ENST00000343060 NPIPB4C9JG80 1138 aa8.54□□□□□ -1.04
HOXA1-201ENST00000343060 TNFRSF10CO14798 259 aa8.54□□□□□ -1.04
HOXA1-201ENST00000343060 SYT7O43581 403 aa8.54□□□□□ -1.04
HOXA1-201ENST00000343060 OR2C1O95371 312 aa8.54□□□□□ -1.04
HOXA1-201ENST00000343060 H2BFMP0C1H6 154 aa8.54□□□□□ -1.04
HOXA1-201ENST00000343060 PAX1P15863 534 aa8.54□□□□□ -1.04
HOXA1-201ENST00000343060 CHATP28329 748 aa8.54□□□□□ -1.04
HOXA1-201ENST00000343060 S100A2P29034 98 aa8.54□□□□□ -1.04
HOXA1-201ENST00000343060 ECI1P42126 302 aa8.54□□□□□ -1.04
HOXA1-201ENST00000343060 HSD17B7P56937 341 aa8.54□□□□□ -1.04
HOXA1-201ENST00000343060 SLC37A1P57057 533 aa8.54□□□□□ -1.04
HOXA1-201ENST00000343060 RAP1BP61224 184 aa8.54□□□□□ -1.04
HOXA1-201ENST00000343060 RAP1AP62834 184 aa8.54□□□□□ -1.04
HOXA1-201ENST00000343060 CDPF1Q6NVV7 123 aa8.54□□□□□ -1.04
HOXA1-201ENST00000343060 GLIPR1L1Q6UWM5 242 aa8.54□□□□□ -1.04
HOXA1-201ENST00000343060 LINC00346Q8IVM7 164 aa8.54□□□□□ -1.04
HOXA1-201ENST00000343060 FAM89BQ8N5H3 189 aa8.54□□□□□ -1.04
HOXA1-201ENST00000343060 C19orf47Q8N9M1 422 aaKnown RBP8.54□□□□□ -1.04
HOXA1-201ENST00000343060 FNDC9Q8TBE3 224 aa8.54□□□□□ -1.04
HOXA1-201ENST00000343060 SSC4DQ8WTU2 575 aa8.54□□□□□ -1.04
HOXA1-201ENST00000343060 SLC25A43Q8WUT9 341 aaPredicted RBP8.54□□□□□ -1.04
HOXA1-201ENST00000343060 TSACCQ96A04 125 aaPredicted RBP8.54□□□□□ -1.04
HOXA1-201ENST00000343060 TMEM59Q9BXS4 323 aa8.54□□□□□ -1.04
HOXA1-201ENST00000343060 FOXQ1Q9C009 403 aa8.54□□□□□ -1.04
HOXA1-201ENST00000343060 EIF5A2Q9GZV4 153 aaKnown RBP8.54□□□□□ -1.04
HOXA1-201ENST00000343060 PBOV1Q9GZY1 135 aa8.54□□□□□ -1.04
HOXA1-201ENST00000343060 NXF5Q9H1B4 397 aaKnown RBP8.54□□□□□ -1.04
HOXA1-201ENST00000343060 OBP2AQ9NY56 170 aa8.54□□□□□ -1.04
HOXA1-201ENST00000343060 BORCS7-ASMTA0A0B4J1R7 106 aa8.54□□□□□ -1.04
HOXA1-201ENST00000343060 SEC14L6B5MCN3 397 aa8.54□□□□□ -1.04
HOXA1-201ENST00000343060 WISP1O95388 367 aa8.54□□□□□ -1.04
HOXA1-201ENST00000343060 MPIG6BO95866 241 aa8.54□□□□□ -1.04
HOXA1-201ENST00000343060 IFNA10P01566 189 aa8.54□□□□□ -1.04
HOXA1-201ENST00000343060 RD3LP0DJH9 198 aa8.54□□□□□ -1.04
HOXA1-201ENST00000343060 BCKDHBP21953 392 aa8.54□□□□□ -1.04
HOXA1-201ENST00000343060 RBMXP38159 391 aaKnown RBP8.54□□□□□ -1.04
HOXA1-201ENST00000343060 RBP2P50120 134 aa8.54□□□□□ -1.04
HOXA1-201ENST00000343060 PPP1CAP62136 330 aa8.54□□□□□ -1.04
HOXA1-201ENST00000343060 DEFB110Q30KQ9 67 aa8.54□□□□□ -1.04
HOXA1-201ENST00000343060 COL13A1Q5TAT6 717 aaPredicted RBP8.54□□□□□ -1.04
HOXA1-201ENST00000343060 RNF144BQ7Z419 303 aa8.54□□□□□ -1.04
HOXA1-201ENST00000343060 REC114Q7Z4M0 266 aa8.54□□□□□ -1.04
HOXA1-201ENST00000343060 ZNF101Q8IZC7 436 aa8.54□□□□□ -1.04
HOXA1-201ENST00000343060 AKR7LQ8NHP1 331 aa8.54□□□□□ -1.04
HOXA1-201ENST00000343060 ASB10Q8WXI3 467 aa8.54□□□□□ -1.04
HOXA1-201ENST00000343060 MR1Q95460 341 aa8.54□□□□□ -1.04
HOXA1-201ENST00000343060 CPNE4Q96A23 557 aaPredicted RBP8.54□□□□□ -1.04
HOXA1-201ENST00000343060 SLC25A36Q96CQ1 311 aa8.54□□□□□ -1.04
HOXA1-201ENST00000343060 WFDC1Q9HC57 220 aa8.54□□□□□ -1.04
HOXA1-201ENST00000343060 DECR2Q9NUI1 292 aa8.54□□□□□ -1.04
HOXA1-201ENST00000343060 HRASLS2Q9NWW9 162 aa8.54□□□□□ -1.04
HOXA1-201ENST00000343060 GFOD1Q9NXC2 390 aa8.54□□□□□ -1.04
HOXA1-201ENST00000343060 DOK5Q9P104 306 aa8.54□□□□□ -1.04
HOXA1-201ENST00000343060 E5RGE8 158 aa8.53□□□□□ -1.04
HOXA1-201ENST00000343060 K7N7A8 449 aa8.53□□□□□ -1.04
HOXA1-201ENST00000343060 RRP8O43159 456 aaKnown RBP8.53□□□□□ -1.04
HOXA1-201ENST00000343060 HCRTR2O43614 444 aa8.53□□□□□ -1.04
HOXA1-201ENST00000343060 PRKNO60260 465 aaPredicted RBP8.53□□□□□ -1.04
HOXA1-201ENST00000343060 CA11O75493 328 aa8.53□□□□□ -1.04
HOXA1-201ENST00000343060 NSA2O95478 260 aaKnown RBP8.53□□□□□ -1.04
HOXA1-201ENST00000343060 GP1BBP13224 206 aa8.53□□□□□ -1.04
HOXA1-201ENST00000343060 CAMLGP49069 296 aa8.53□□□□□ -1.04
HOXA1-201ENST00000343060 POLR2HP52434 150 aaKnown RBP8.53□□□□□ -1.04
HOXA1-201ENST00000343060 ZNF616Q08AN1 781 aa8.53□□□□□ -1.04
HOXA1-201ENST00000343060 ZP4Q12836 540 aa8.53□□□□□ -1.04
HOXA1-201ENST00000343060 EIF3IQ13347 325 aaKnown RBP8.53□□□□□ -1.04
HOXA1-201ENST00000343060 RD3Q7Z3Z2 195 aa8.53□□□□□ -1.04
HOXA1-201ENST00000343060 TMEM156Q8N614 296 aa8.53□□□□□ -1.04
HOXA1-201ENST00000343060 OR8G5Q8NG78 346 aa8.53□□□□□ -1.04
HOXA1-201ENST00000343060 SNIP1Q8TAD8 396 aaKnown RBP8.53□□□□□ -1.04
HOXA1-201ENST00000343060 SPPL3Q8TCT6 385 aa8.53□□□□□ -1.04
HOXA1-201ENST00000343060 ARHGAP5-AS1Q96IT6 56 aa8.53□□□□□ -1.04
HOXA1-201ENST00000343060 SLC46A1Q96NT5 459 aa8.53□□□□□ -1.04
HOXA1-201ENST00000343060 KCNK17Q96T54 332 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms