RNA–Protein interactions for RNA: ENST00000342503.8

RTN1-202, Transcript of reticulon 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RTN1, Length 1,703 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-202ENST00000342503 RAB1AP62820 205 aa17.37■□□□□ 0.37
RTN1-202ENST00000342503 FAM3AP98173 230 aa17.37■□□□□ 0.37
RTN1-202ENST00000342503 NHLH1Q02575 133 aa17.37■□□□□ 0.37
RTN1-202ENST00000342503 PNLDC1Q8NA58 520 aaKnown RBP17.37■□□□□ 0.37
RTN1-202ENST00000342503 AKAP1Q92667 903 aaKnown RBP eCLIP17.37■□□□□ 0.37
RTN1-202ENST00000342503 CMBLQ96DG6 245 aa17.37■□□□□ 0.37
RTN1-202ENST00000342503 ST6GAL2Q96JF0 529 aa17.37■□□□□ 0.37
RTN1-202ENST00000342503 MCUBQ9NWR8 336 aa17.37■□□□□ 0.37
RTN1-202ENST00000342503 TAS2R8Q9NYW2 309 aa17.37■□□□□ 0.37
RTN1-202ENST00000342503 ZNF221Q9UK13 617 aa17.37■□□□□ 0.37
RTN1-202ENST00000342503 ELF5Q9UKW6 265 aaPredicted RBP17.37■□□□□ 0.37
RTN1-202ENST00000342503 XRCC2O43543 280 aa17.36■□□□□ 0.37
RTN1-202ENST00000342503 CDC14BO60729 498 aa17.36■□□□□ 0.37
RTN1-202ENST00000342503 MPIG6BO95866 241 aa17.36■□□□□ 0.37
RTN1-202ENST00000342503 LPLP06858 475 aa17.36■□□□□ 0.37
RTN1-202ENST00000342503 UBBP0CG47 229 aa17.36■□□□□ 0.37
RTN1-202ENST00000342503 VEGFCP49767 419 aa17.36■□□□□ 0.37
RTN1-202ENST00000342503 GSK3AP49840 483 aa17.36■□□□□ 0.37
RTN1-202ENST00000342503 SSBP1Q04837 148 aaKnown RBP17.36■□□□□ 0.37
RTN1-202ENST00000342503 ZNF260Q3ZCT1 412 aa17.36■□□□□ 0.37
RTN1-202ENST00000342503 HIKESHIQ53FT3 197 aa17.36■□□□□ 0.37
RTN1-202ENST00000342503 ATAD3CQ5T2N8 411 aa17.36■□□□□ 0.37
RTN1-202ENST00000342503 COLCA1Q6ZS62 124 aa17.36■□□□□ 0.37
RTN1-202ENST00000342503 CHST4Q8NCG5 386 aa17.36■□□□□ 0.37
RTN1-202ENST00000342503 TMEM104Q8NE00 496 aa17.36■□□□□ 0.37
RTN1-202ENST00000342503 OR5D18Q8NGL1 313 aa17.36■□□□□ 0.37
RTN1-202ENST00000342503 AQP3Q92482 292 aa17.36■□□□□ 0.37
RTN1-202ENST00000342503 BCL2L2Q92843 193 aaPredicted RBP17.36■□□□□ 0.37
RTN1-202ENST00000342503 LPAR5Q9H1C0 372 aa17.36■□□□□ 0.37
RTN1-202ENST00000342503 SCPEP1Q9HB40 452 aa17.36■□□□□ 0.37
RTN1-202ENST00000342503 ING4Q9UNL4 249 aa17.36■□□□□ 0.37
RTN1-202ENST00000342503 MYO7BQ6PIF6 2116 aa17.36■□□□□ 0.37
RTN1-202ENST00000342503 CCL2P13500 99 aa17.35■□□□□ 0.37
RTN1-202ENST00000342503 CCNOP22674 350 aa17.35■□□□□ 0.37
RTN1-202ENST00000342503 STOMP27105 288 aa17.35■□□□□ 0.37
RTN1-202ENST00000342503 PTGFRP43088 359 aa17.35■□□□□ 0.37
RTN1-202ENST00000342503 GCNT2Q8N0V5 402 aa17.35■□□□□ 0.37
RTN1-202ENST00000342503 KCNG3Q8TAE7 436 aa17.35■□□□□ 0.37
RTN1-202ENST00000342503 SPSB4Q96A44 273 aa17.35■□□□□ 0.37
RTN1-202ENST00000342503 NICN1Q9BSH3 213 aa17.35■□□□□ 0.37
RTN1-202ENST00000342503 C20orf85Q9H1P6 137 aa17.35■□□□□ 0.37
RTN1-202ENST00000342503 BANF2Q9H503 90 aa17.35■□□□□ 0.37
RTN1-202ENST00000342503 A0A0A6YYD4 124 aa17.35■□□□□ 0.37
RTN1-202ENST00000342503 A0A0A6YYJ9 748 aa17.35■□□□□ 0.37
RTN1-202ENST00000342503 A0A1W2PP11 408 aa17.35■□□□□ 0.37
RTN1-202ENST00000342503 C5orf49A4QMS7 147 aa17.35■□□□□ 0.37
RTN1-202ENST00000342503 TMEM235A6NFC5 223 aa17.35■□□□□ 0.37
RTN1-202ENST00000342503 FCER2P06734 321 aa17.35■□□□□ 0.37
RTN1-202ENST00000342503 GTF2F2P13984 249 aa17.35■□□□□ 0.37
RTN1-202ENST00000342503 PSMB1P20618 241 aaKnown RBP17.35■□□□□ 0.37
RTN1-202ENST00000342503 Q6ZS92 163 aa17.35■□□□□ 0.37
RTN1-202ENST00000342503 Q6ZTK2 550 aa17.35■□□□□ 0.37
RTN1-202ENST00000342503 C1QL2Q7Z5L3 287 aa17.35■□□□□ 0.37
RTN1-202ENST00000342503 OR10R2Q8NGX6 335 aa17.35■□□□□ 0.37
RTN1-202ENST00000342503 TNFAIP8L1Q8WVP5 186 aa17.35■□□□□ 0.37
RTN1-202ENST00000342503 LOC400499M0QZD8 3231 aa17.34■□□□□ 0.37
RTN1-202ENST00000342503 CRTAPO75718 401 aaPredicted RBP17.34■□□□□ 0.37
RTN1-202ENST00000342503 SCGNO76038 276 aa17.34■□□□□ 0.37
RTN1-202ENST00000342503 NAT2P11245 290 aa17.34■□□□□ 0.37
RTN1-202ENST00000342503 ALDH3B1P43353 468 aa17.34■□□□□ 0.37
RTN1-202ENST00000342503 ACTBP60709 375 aa17.34■□□□□ 0.37
RTN1-202ENST00000342503 ACTG1P63261 375 aa17.34■□□□□ 0.37
RTN1-202ENST00000342503 GUSBP1Q15486 140 aa17.34■□□□□ 0.37
RTN1-202ENST00000342503 CDNFQ49AH0 187 aa17.34■□□□□ 0.37
RTN1-202ENST00000342503 TFAP2EQ6VUC0 442 aa17.34■□□□□ 0.37
RTN1-202ENST00000342503 OR4C16Q8NGL9 310 aa17.34■□□□□ 0.37
RTN1-202ENST00000342503 OR56B4Q8NH76 319 aa17.34■□□□□ 0.37
RTN1-202ENST00000342503 DEDD2Q8WXF8 326 aa17.34■□□□□ 0.37
RTN1-202ENST00000342503 NUDT16L1Q9BRJ7 211 aaKnown RBP17.34■□□□□ 0.37
RTN1-202ENST00000342503 SCNM1Q9BWG6 230 aa17.34■□□□□ 0.37
RTN1-202ENST00000342503 TMEM59Q9BXS4 323 aa17.34■□□□□ 0.37
RTN1-202ENST00000342503 NKIRAS2Q9NYR9 191 aa17.34■□□□□ 0.37
RTN1-202ENST00000342503 K7EM74 188 aa17.33■□□□□ 0.37
RTN1-202ENST00000342503 CHRM2P08172 466 aa17.33■□□□□ 0.37
RTN1-202ENST00000342503 AKAIN1P0CW23 69 aa17.33■□□□□ 0.37
RTN1-202ENST00000342503 FAUP35544 74 aaKnown RBP17.33■□□□□ 0.37
RTN1-202ENST00000342503 RAG2P55895 527 aa17.33■□□□□ 0.37
RTN1-202ENST00000342503 RRAS2P62070 204 aaPredicted RBP17.33■□□□□ 0.37
RTN1-202ENST00000342503 PLP2Q04941 152 aa17.33■□□□□ 0.37
RTN1-202ENST00000342503 CNN3Q15417 329 aaKnown RBP17.33■□□□□ 0.37
RTN1-202ENST00000342503 OR8B8Q15620 311 aa17.33■□□□□ 0.37
RTN1-202ENST00000342503 LINC00303Q3SY05 128 aa17.33■□□□□ 0.37
RTN1-202ENST00000342503 SLC22A6Q4U2R8 563 aa17.33■□□□□ 0.37
RTN1-202ENST00000342503 CLVS2Q5SYC1 327 aa17.33■□□□□ 0.37
RTN1-202ENST00000342503 TMEM42Q69YG0 159 aa17.33■□□□□ 0.37
RTN1-202ENST00000342503 FAM214BQ7L5A3 538 aa17.33■□□□□ 0.37
RTN1-202ENST00000342503 DPPA2Q7Z7J5 298 aa17.33■□□□□ 0.37
RTN1-202ENST00000342503 ZNF584Q8IVC4 421 aa17.33■□□□□ 0.37
RTN1-202ENST00000342503 RBMXL3Q8N7X1 1067 aaKnown RBP17.33■□□□□ 0.37
RTN1-202ENST00000342503 C9orf106Q8NAJ2 232 aa17.33■□□□□ 0.37
RTN1-202ENST00000342503 SPSB1Q96BD6 273 aa17.33■□□□□ 0.37
RTN1-202ENST00000342503 POM121L2Q96KW2 1035 aa17.33■□□□□ 0.37
RTN1-202ENST00000342503 ACTR6Q9GZN1 396 aa17.33■□□□□ 0.37
RTN1-202ENST00000342503 GHRLQ9UBU3 117 aa17.33■□□□□ 0.37
RTN1-202ENST00000342503 FLVCR2Q9UPI3 526 aa17.33■□□□□ 0.37
RTN1-202ENST00000342503 C7orf66A4D0T2 115 aa17.33■□□□□ 0.36
RTN1-202ENST00000342503 GFRA3O60609 400 aa17.33■□□□□ 0.36
RTN1-202ENST00000342503 RTN4RL2Q86UN3 420 aa17.33■□□□□ 0.36
RTN1-202ENST00000342503 FJX1Q86VR8 437 aa17.33■□□□□ 0.36
RTN1-202ENST00000342503 TMEM229BQ8NBD8 167 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms