RNA–Protein interactions for RNA: ENST00000342220.9

COL18A1-201, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 3,386 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-201ENST00000342220 ANKRD20A5PA0PJZ0 165 aa11.54□□□□□ -0.56
COL18A1-201ENST00000342220 METTL21EPA6NDL7 271 aa11.54□□□□□ -0.56
COL18A1-201ENST00000342220 RP2O75695 350 aa11.54□□□□□ -0.56
COL18A1-201ENST00000342220 APEHP13798 732 aaKnown RBP11.54□□□□□ -0.56
COL18A1-201ENST00000342220 PRF1P14222 555 aa11.54□□□□□ -0.56
COL18A1-201ENST00000342220 AAED1Q7RTV5 226 aa11.54□□□□□ -0.56
COL18A1-201ENST00000342220 UXS1Q8NBZ7 420 aa11.54□□□□□ -0.56
COL18A1-201ENST00000342220 ELL3Q9HB65 397 aaPredicted RBP11.54□□□□□ -0.56
COL18A1-201ENST00000342220 PLEK2Q9NYT0 353 aa11.54□□□□□ -0.56
COL18A1-201ENST00000342220 FRRS1LQ9P0K9 344 aa11.54□□□□□ -0.56
COL18A1-201ENST00000342220 A0A1B0GUH1 482 aa11.54□□□□□ -0.56
COL18A1-201ENST00000342220 ARPC5O15511 151 aa11.54□□□□□ -0.56
COL18A1-201ENST00000342220 GFRA3O60609 400 aa11.54□□□□□ -0.56
COL18A1-201ENST00000342220 PRAF2O60831 178 aa11.54□□□□□ -0.56
COL18A1-201ENST00000342220 S100A8P05109 93 aa11.54□□□□□ -0.56
COL18A1-201ENST00000342220 SOX8P57073 446 aa11.54□□□□□ -0.56
COL18A1-201ENST00000342220 AP3S2P59780 193 aa11.54□□□□□ -0.56
COL18A1-201ENST00000342220 SPOCK1Q08629 439 aa11.54□□□□□ -0.56
COL18A1-201ENST00000342220 RASGEF1BQ0VAM2 473 aa11.54□□□□□ -0.56
COL18A1-201ENST00000342220 SMCO1Q147U7 214 aa11.54□□□□□ -0.56
COL18A1-201ENST00000342220 OR2B11Q5JQS5 317 aa11.54□□□□□ -0.56
COL18A1-201ENST00000342220 AVPI1Q5T686 147 aa11.54□□□□□ -0.56
COL18A1-201ENST00000342220 TMEM251Q8N6I4 163 aa11.54□□□□□ -0.56
COL18A1-201ENST00000342220 PLPP7Q8NBV4 271 aa11.54□□□□□ -0.56
COL18A1-201ENST00000342220 WNT2BQ93097 391 aa11.54□□□□□ -0.56
COL18A1-201ENST00000342220 ARL6Q9H0F7 186 aa11.54□□□□□ -0.56
COL18A1-201ENST00000342220 KCNK15Q9H427 330 aa11.54□□□□□ -0.56
COL18A1-201ENST00000342220 PIPOXQ9P0Z9 390 aa11.54□□□□□ -0.56
COL18A1-201ENST00000342220 KLK13Q9UKR3 277 aa11.54□□□□□ -0.56
COL18A1-201ENST00000342220 ZGRF1Q86YA3 2104 aa11.54□□□□□ -0.56
COL18A1-201ENST00000342220 ADAM10O14672 748 aa11.54□□□□□ -0.56
COL18A1-201ENST00000342220 UPK3AO75631 287 aa11.54□□□□□ -0.56
COL18A1-201ENST00000342220 SUMO3P55854 103 aaPredicted RBP11.54□□□□□ -0.56
COL18A1-201ENST00000342220 TAS2R20P59543 309 aa11.54□□□□□ -0.56
COL18A1-201ENST00000342220 ZNF766Q5HY98 468 aa11.54□□□□□ -0.56
COL18A1-201ENST00000342220 ELFN2Q5R3F8 820 aa11.54□□□□□ -0.56
COL18A1-201ENST00000342220 GLDNQ6ZMI3 551 aaPredicted RBP11.54□□□□□ -0.56
COL18A1-201ENST00000342220 MEIOBQ8N635 442 aa11.54□□□□□ -0.56
COL18A1-201ENST00000342220 CNEP1R1Q8N9A8 125 aa11.54□□□□□ -0.56
COL18A1-201ENST00000342220 ASB10Q8WXI3 467 aa11.54□□□□□ -0.56
COL18A1-201ENST00000342220 MCHR2Q969V1 340 aa11.54□□□□□ -0.56
COL18A1-201ENST00000342220 TTTY12Q9BZ98 90 aa11.54□□□□□ -0.56
COL18A1-201ENST00000342220 CRLF2Q9HC73 371 aa11.54□□□□□ -0.56
COL18A1-201ENST00000342220 LHX6Q9UPM6 363 aa11.54□□□□□ -0.56
COL18A1-201ENST00000342220 ABCA4P78363 2273 aa11.54□□□□□ -0.56
COL18A1-201ENST00000342220 NAP1L6A6NFF2 107 aa11.53□□□□□ -0.56
COL18A1-201ENST00000342220 SPDEFO95238 335 aa11.53□□□□□ -0.56
COL18A1-201ENST00000342220 CCL2P13500 99 aa11.53□□□□□ -0.56
COL18A1-201ENST00000342220 AKR1C2P52895 323 aa11.53□□□□□ -0.56
COL18A1-201ENST00000342220 ART1P52961 327 aa11.53□□□□□ -0.56
COL18A1-201ENST00000342220 NUBP1P53384 320 aa11.53□□□□□ -0.56
COL18A1-201ENST00000342220 CSNK2A1P68400 391 aaPredicted RBP11.53□□□□□ -0.56
COL18A1-201ENST00000342220 AKR1C1Q04828 323 aa11.53□□□□□ -0.56
COL18A1-201ENST00000342220 Q499Y3 187 aa11.53□□□□□ -0.56
COL18A1-201ENST00000342220 KCTD18Q6PI47 426 aaPredicted RBP11.53□□□□□ -0.56
COL18A1-201ENST00000342220 LDLRAD3Q86YD5 345 aa11.53□□□□□ -0.56
COL18A1-201ENST00000342220 GTPBP8Q8N3Z3 284 aaPredicted RBP11.53□□□□□ -0.56
COL18A1-201ENST00000342220 OR52B4Q8NGK2 314 aa11.53□□□□□ -0.56
COL18A1-201ENST00000342220 HAVCR1Q96D42 359 aa11.53□□□□□ -0.56
COL18A1-201ENST00000342220 SLC25A44Q96H78 314 aaPredicted RBP11.53□□□□□ -0.56
COL18A1-201ENST00000342220 LIPGQ9Y5X9 500 aa11.53□□□□□ -0.56
COL18A1-201ENST00000342220 TRAV8-7A0A075B6U6 113 aa11.53□□□□□ -0.56
COL18A1-201ENST00000342220 PNPP00491 289 aa11.53□□□□□ -0.56
COL18A1-201ENST00000342220 ABOP16442 354 aa11.53□□□□□ -0.56
COL18A1-201ENST00000342220 POU3F4P49335 361 aa11.53□□□□□ -0.56
COL18A1-201ENST00000342220 MFGE8Q08431 387 aaPredicted RBP11.53□□□□□ -0.56
COL18A1-201ENST00000342220 NHLRC1Q6VVB1 395 aa11.53□□□□□ -0.56
COL18A1-201ENST00000342220 P4HA3Q7Z4N8 544 aa11.53□□□□□ -0.56
COL18A1-201ENST00000342220 PIP4P1Q86T03 277 aa11.53□□□□□ -0.56
COL18A1-201ENST00000342220 DND1Q8IYX4 353 aaKnown RBP11.53□□□□□ -0.56
COL18A1-201ENST00000342220 GPR137CQ8N3F9 429 aa11.53□□□□□ -0.56
COL18A1-201ENST00000342220 GTF3AQ92664 365 aaKnown RBP11.53□□□□□ -0.56
COL18A1-201ENST00000342220 ZBTB8AQ96BR9 441 aa11.53□□□□□ -0.56
COL18A1-201ENST00000342220 NAA11Q9BSU3 229 aaPredicted RBP11.53□□□□□ -0.56
COL18A1-201ENST00000342220 IGHV3-64DA0A0J9YX35 117 aa11.53□□□□□ -0.56
COL18A1-201ENST00000342220 OR5H15A6NDH6 313 aa11.53□□□□□ -0.56
COL18A1-201ENST00000342220 RAB40ALP0C0E4 278 aa11.53□□□□□ -0.56
COL18A1-201ENST00000342220 H2AFB1P0C5Y9 115 aa11.53□□□□□ -0.56
COL18A1-201ENST00000342220 ALOX5APP20292 161 aa11.53□□□□□ -0.56
COL18A1-201ENST00000342220 NFYAP23511 347 aaPredicted RBP11.53□□□□□ -0.56
COL18A1-201ENST00000342220 PSMA6P60900 246 aaKnown RBP11.53□□□□□ -0.56
COL18A1-201ENST00000342220 HLXQ14774 488 aaPredicted RBP11.53□□□□□ -0.56
COL18A1-201ENST00000342220 SSX2Q16385 188 aa11.53□□□□□ -0.56
COL18A1-201ENST00000342220 FAM57BQ71RH2 274 aa11.53□□□□□ -0.56
COL18A1-201ENST00000342220 NAA40Q86UY6 237 aa11.53□□□□□ -0.56
COL18A1-201ENST00000342220 OTOSQ8NHW6 89 aa11.53□□□□□ -0.56
COL18A1-201ENST00000342220 SNIP1Q8TAD8 396 aaKnown RBP11.53□□□□□ -0.56
COL18A1-201ENST00000342220 FAM46BQ96A09 425 aa11.53□□□□□ -0.56
COL18A1-201ENST00000342220 MIB2Q96AX9 1013 aa11.53□□□□□ -0.56
COL18A1-201ENST00000342220 SCNM1Q9BWG6 230 aa11.53□□□□□ -0.56
COL18A1-201ENST00000342220 SLITRK2Q9H156 845 aa11.53□□□□□ -0.56
COL18A1-201ENST00000342220 DLL3Q9NYJ7 618 aa11.53□□□□□ -0.56
COL18A1-201ENST00000342220 B3GAT1Q9P2W7 334 aa11.53□□□□□ -0.56
COL18A1-201ENST00000342220 LRP12Q9Y561 859 aa11.53□□□□□ -0.56
COL18A1-201ENST00000342220 COL12A1Q99715 3063 aa11.52□□□□□ -0.56
COL18A1-201ENST00000342220 A6NIZ1 184 aa11.52□□□□□ -0.56
COL18A1-201ENST00000342220 LRRC3CA6NJW4 275 aa11.52□□□□□ -0.56
COL18A1-201ENST00000342220 LMX1BO60663 402 aa11.52□□□□□ -0.56
COL18A1-201ENST00000342220 DBHP09172 617 aa11.52□□□□□ -0.56
COL18A1-201ENST00000342220 CALCBP10092 127 aa11.52□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms