RNA–Protein interactions for RNA: ENST00000340648.5

RRP1B-201, Transcript of ribosomal RNA processing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RRP1B, Length 5,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP1B-201ENST00000340648 ENPP1P22413 925 aa13.29□□□□□ -0.28
RRP1B-201ENST00000340648 CARD18P57730 90 aa13.29□□□□□ -0.28
RRP1B-201ENST00000340648 CD226Q15762 336 aa13.29□□□□□ -0.28
RRP1B-201ENST00000340648 ZNF705AQ6ZN79 300 aaPredicted RBP13.29□□□□□ -0.28
RRP1B-201ENST00000340648 FGF14Q92915 247 aa13.29□□□□□ -0.28
RRP1B-201ENST00000340648 C8orf44Q96CB5 159 aa13.29□□□□□ -0.28
RRP1B-201ENST00000340648 MYO16Q9Y6X6 1858 aa13.29□□□□□ -0.28
RRP1B-201ENST00000340648 SSR4P51571 173 aa13.29□□□□□ -0.28
RRP1B-201ENST00000340648 LTC4SQ16873 150 aa13.29□□□□□ -0.28
RRP1B-201ENST00000340648 TMEM41BQ5BJD5 291 aa13.29□□□□□ -0.28
RRP1B-201ENST00000340648 OVCH2Q7RTZ1 564 aa13.29□□□□□ -0.28
RRP1B-201ENST00000340648 MRPL38Q96DV4 380 aaKnown RBP13.29□□□□□ -0.28
RRP1B-201ENST00000340648 TMPRSS13Q9BYE2 586 aa13.29□□□□□ -0.28
RRP1B-201ENST00000340648 PTP4A3O75365 173 aa13.28□□□□□ -0.28
RRP1B-201ENST00000340648 CRHP06850 196 aa13.28□□□□□ -0.28
RRP1B-201ENST00000340648 PSMB3P49720 205 aa13.28□□□□□ -0.28
RRP1B-201ENST00000340648 NKAIN1Q4KMZ8 207 aa13.28□□□□□ -0.28
RRP1B-201ENST00000340648 LAMTOR1Q6IAA8 161 aa13.28□□□□□ -0.28
RRP1B-201ENST00000340648 PPP5D1E7EU14 171 aa13.28□□□□□ -0.28
RRP1B-201ENST00000340648 SPRY1O43609 319 aaPredicted RBP13.28□□□□□ -0.28
RRP1B-201ENST00000340648 OR2J2O76002 312 aa13.28□□□□□ -0.28
RRP1B-201ENST00000340648 F10P00742 488 aa13.28□□□□□ -0.28
RRP1B-201ENST00000340648 TOMM34Q15785 309 aaPredicted RBP13.28□□□□□ -0.28
RRP1B-201ENST00000340648 CLEC9AQ6UXN8 241 aa13.28□□□□□ -0.28
RRP1B-201ENST00000340648 RSRP1Q9BUV0 290 aa13.28□□□□□ -0.28
RRP1B-201ENST00000340648 STRADBQ9C0K7 418 aa13.28□□□□□ -0.28
RRP1B-201ENST00000340648 PAPPA2Q9BXP8 1791 aa13.28□□□□□ -0.28
RRP1B-201ENST00000340648 KCNAB3O43448 404 aa13.28□□□□□ -0.28
RRP1B-201ENST00000340648 F12P00748 615 aaPredicted RBP13.28□□□□□ -0.28
RRP1B-201ENST00000340648 BCKDHBP21953 392 aa13.28□□□□□ -0.28
RRP1B-201ENST00000340648 CLEC12BQ2HXU8 276 aa13.28□□□□□ -0.28
RRP1B-201ENST00000340648 OR2T2Q6IF00 324 aa13.28□□□□□ -0.28
RRP1B-201ENST00000340648 IGHV3-15A0A0B4J1V0 119 aa13.28□□□□□ -0.28
RRP1B-201ENST00000340648 SERPINE3A8MV23 424 aa13.28□□□□□ -0.28
RRP1B-201ENST00000340648 OR3A4PP47883 348 aa13.28□□□□□ -0.28
RRP1B-201ENST00000340648 TMEM240Q5SV17 173 aa13.28□□□□□ -0.28
RRP1B-201ENST00000340648 TFAP2EQ6VUC0 442 aa13.28□□□□□ -0.28
RRP1B-201ENST00000340648 THNSL2Q86YJ6 484 aa13.28□□□□□ -0.28
RRP1B-201ENST00000340648 ATOH1Q92858 354 aaPredicted RBP13.28□□□□□ -0.28
RRP1B-201ENST00000340648 AP1S3Q96PC3 154 aa13.28□□□□□ -0.28
RRP1B-201ENST00000340648 ZNF275Q9NSD4 429 aaPredicted RBP13.28□□□□□ -0.28
RRP1B-201ENST00000340648 FBXL17Q9UF56 701 aa13.28□□□□□ -0.28
RRP1B-201ENST00000340648 RGPD3A6NKT7 1758 aaPredicted RBP13.27□□□□□ -0.28
RRP1B-201ENST00000340648 RGPD4Q7Z3J3 1758 aa13.27□□□□□ -0.28
RRP1B-201ENST00000340648 IGKV1-8A0A0C4DH67 115 aa13.27□□□□□ -0.28
RRP1B-201ENST00000340648 MFSD2BA6NFX1 497 aa13.27□□□□□ -0.28
RRP1B-201ENST00000340648 ZNF98A6NK75 572 aa13.27□□□□□ -0.28
RRP1B-201ENST00000340648 ZNF727A8MUV8 499 aa13.27□□□□□ -0.28
RRP1B-201ENST00000340648 BCAT2O15382 392 aaPredicted RBP13.27□□□□□ -0.28
RRP1B-201ENST00000340648 GREM1O60565 184 aa13.27□□□□□ -0.28
RRP1B-201ENST00000340648 CYTIPO60759 359 aa13.27□□□□□ -0.28
RRP1B-201ENST00000340648 ISOC2Q96AB3 205 aa13.27□□□□□ -0.28
RRP1B-201ENST00000340648 FAM60AQ9NP50 221 aa13.27□□□□□ -0.28
RRP1B-201ENST00000340648 KLHDC2Q9Y2U9 406 aa13.27□□□□□ -0.28
RRP1B-201ENST00000340648 H7BYZ3 331 aa13.27□□□□□ -0.29
RRP1B-201ENST00000340648 NRG2O14511 850 aaPredicted RBP13.27□□□□□ -0.29
RRP1B-201ENST00000340648 HS3ST1O14792 307 aa13.27□□□□□ -0.29
RRP1B-201ENST00000340648 CST7O76096 145 aa13.27□□□□□ -0.29
RRP1B-201ENST00000340648 ADRA2AP08913 450 aa13.27□□□□□ -0.29
RRP1B-201ENST00000340648 ABCD3P28288 659 aa13.27□□□□□ -0.29
RRP1B-201ENST00000340648 RASL12Q9NYN1 266 aa13.27□□□□□ -0.29
RRP1B-201ENST00000340648 NOSIPQ9Y314 301 aaKnown RBP13.27□□□□□ -0.29
RRP1B-201ENST00000340648 RNF212BA8MTL3 300 aa13.27□□□□□ -0.29
RRP1B-201ENST00000340648 EML2O95834 649 aa13.27□□□□□ -0.29
RRP1B-201ENST00000340648 HLA-HP01893 362 aa13.27□□□□□ -0.29
RRP1B-201ENST00000340648 ECH1Q13011 328 aa13.27□□□□□ -0.29
RRP1B-201ENST00000340648 ZNF660Q6AZW8 331 aaPredicted RBP13.27□□□□□ -0.29
RRP1B-201ENST00000340648 CABLES2Q9BTV7 478 aa13.27□□□□□ -0.29
RRP1B-201ENST00000340648 SLCO1B1Q9Y6L6 691 aa13.27□□□□□ -0.29
RRP1B-201ENST00000340648 SCN3AQ9NY46 2000 aa13.27□□□□□ -0.29
RRP1B-201ENST00000340648 FAM74A7A6NL05 159 aa13.27□□□□□ -0.29
RRP1B-201ENST00000340648 H3BP45 60 aa13.27□□□□□ -0.29
RRP1B-201ENST00000340648 RPP30P78346 268 aaKnown RBP13.27□□□□□ -0.29
RRP1B-201ENST00000340648 FAM74A3Q4VXF1 159 aa13.27□□□□□ -0.29
RRP1B-201ENST00000340648 IGSF11Q5DX21 431 aa13.27□□□□□ -0.29
RRP1B-201ENST00000340648 TMEM52Q8NDY8 209 aa13.27□□□□□ -0.29
RRP1B-201ENST00000340648 LIN37Q96GY3 246 aaPredicted RBP13.27□□□□□ -0.29
RRP1B-201ENST00000340648 PIGQQ9BRB3 760 aa13.27□□□□□ -0.29
RRP1B-201ENST00000340648 CRYBA1P05813 215 aa13.26□□□□□ -0.29
RRP1B-201ENST00000340648 DAOP14920 347 aa13.26□□□□□ -0.29
RRP1B-201ENST00000340648 PEBP1P30086 187 aaKnown RBP13.26□□□□□ -0.29
RRP1B-201ENST00000340648 FAM199XQ6PEV8 388 aaPredicted RBP13.26□□□□□ -0.29
RRP1B-201ENST00000340648 Q7L0L9 218 aa13.26□□□□□ -0.29
RRP1B-201ENST00000340648 SLC25A38Q96DW6 304 aa13.26□□□□□ -0.29
RRP1B-201ENST00000340648 OXGR1Q96P68 337 aa13.26□□□□□ -0.29
RRP1B-201ENST00000340648 RER1O15258 196 aa13.26□□□□□ -0.29
RRP1B-201ENST00000340648 NRASP01111 189 aa13.26□□□□□ -0.29
RRP1B-201ENST00000340648 SPP1P10451 314 aa13.26□□□□□ -0.29
RRP1B-201ENST00000340648 CATR1Q13166 79 aa13.26□□□□□ -0.29
RRP1B-201ENST00000340648 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.26□□□□□ -0.29
RRP1B-201ENST00000340648 IL22RA1Q8N6P7 574 aa13.26□□□□□ -0.29
RRP1B-201ENST00000340648 VSTM2LQ96N03 204 aa13.26□□□□□ -0.29
RRP1B-201ENST00000340648 CALHM2Q9HA72 323 aa13.26□□□□□ -0.29
RRP1B-201ENST00000340648 KIR2DS1A0A191URI9 304 aa13.26□□□□□ -0.29
RRP1B-201ENST00000340648 A0A1W2PPH5 198 aa13.26□□□□□ -0.29
RRP1B-201ENST00000340648 KIR2DS4P43632 304 aa13.26□□□□□ -0.29
RRP1B-201ENST00000340648 KCNJ3P48549 501 aa13.26□□□□□ -0.29
RRP1B-201ENST00000340648 RNF4P78317 190 aa13.26□□□□□ -0.29
RRP1B-201ENST00000340648 KIR2DS1Q14954 304 aa13.26□□□□□ -0.29
RRP1B-201ENST00000340648 ATG4DQ86TL0 474 aaPredicted RBP13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms