RNA–Protein interactions for RNA: ENST00000340417.7

LIN54-201, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN54, Length 6,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-201ENST00000340417 ETV1P50549 477 aa11.34□□□□□ -0.59
LIN54-201ENST00000340417 LUMP51884 338 aaPredicted RBP11.34□□□□□ -0.59
LIN54-201ENST00000340417 METTL11BQ5VVY1 283 aa11.34□□□□□ -0.59
LIN54-201ENST00000340417 OR2G2Q8NGZ5 317 aa11.34□□□□□ -0.59
LIN54-201ENST00000340417 PLA2G12AQ9BZM1 189 aa11.34□□□□□ -0.59
LIN54-201ENST00000340417 MPC1Q9Y5U8 109 aa11.34□□□□□ -0.59
LIN54-201ENST00000340417 F2RL2O00254 374 aa11.33□□□□□ -0.59
LIN54-201ENST00000340417 MPZL1O95297 269 aa11.33□□□□□ -0.59
LIN54-201ENST00000340417 OR8H1Q8NGG4 311 aa11.33□□□□□ -0.59
LIN54-201ENST00000340417 EDARADDQ8WWZ3 215 aa11.33□□□□□ -0.59
LIN54-201ENST00000340417 SPSB1Q96BD6 273 aa11.33□□□□□ -0.59
LIN54-201ENST00000340417 FAM221AA4D161 298 aa11.33□□□□□ -0.6
LIN54-201ENST00000340417 SUB1P53999 127 aaKnown RBP eCLIP11.33□□□□□ -0.6
LIN54-201ENST00000340417 LSM6P62312 80 aaKnown RBP11.33□□□□□ -0.6
LIN54-201ENST00000340417 BCL2A1Q16548 175 aa11.33□□□□□ -0.6
LIN54-201ENST00000340417 CDH24Q86UP0 819 aa11.33□□□□□ -0.6
LIN54-201ENST00000340417 GALMQ96C23 342 aa11.33□□□□□ -0.6
LIN54-201ENST00000340417 BCL7BQ9BQE9 202 aa11.33□□□□□ -0.6
LIN54-201ENST00000340417 GABARAPL3Q9BY60 117 aa11.33□□□□□ -0.6
LIN54-201ENST00000340417 GPR137BO60478 399 aa11.33□□□□□ -0.6
LIN54-201ENST00000340417 DHRS3O75911 302 aa11.33□□□□□ -0.6
LIN54-201ENST00000340417 SERPINF1P36955 418 aa11.33□□□□□ -0.6
LIN54-201ENST00000340417 CDKN2AP42771 156 aaKnown RBP11.33□□□□□ -0.6
LIN54-201ENST00000340417 PCBP3P57721 371 aaKnown RBP11.33□□□□□ -0.6
LIN54-201ENST00000340417 NOXA1Q86UR1 476 aa11.33□□□□□ -0.6
LIN54-201ENST00000340417 MSRB3Q8IXL7 192 aa11.33□□□□□ -0.6
LIN54-201ENST00000340417 SDSLQ96GA7 329 aa11.33□□□□□ -0.6
LIN54-201ENST00000340417 OR5M11Q96RB7 305 aa11.33□□□□□ -0.6
LIN54-201ENST00000340417 SVILO95425 2214 aa11.33□□□□□ -0.6
LIN54-201ENST00000340417 ARPC3O15145 178 aa11.33□□□□□ -0.6
LIN54-201ENST00000340417 MINDY2Q8NBR6 621 aa11.33□□□□□ -0.6
LIN54-201ENST00000340417 FKBP14Q9NWM8 211 aa11.33□□□□□ -0.6
LIN54-201ENST00000340417 IL20Q9NYY1 176 aa11.33□□□□□ -0.6
LIN54-201ENST00000340417 NCOR1O75376 2440 aa11.33□□□□□ -0.6
LIN54-201ENST00000340417 TCRBV5S2A0A599 114 aa11.33□□□□□ -0.6
LIN54-201ENST00000340417 FADS1O60427 444 aa11.33□□□□□ -0.6
LIN54-201ENST00000340417 BRS3P32247 399 aa11.33□□□□□ -0.6
LIN54-201ENST00000340417 RAB11AP62491 216 aa11.33□□□□□ -0.6
LIN54-201ENST00000340417 CCL8P80075 99 aa11.33□□□□□ -0.6
LIN54-201ENST00000340417 PRAMEF5Q5TYX0 476 aa11.33□□□□□ -0.6
LIN54-201ENST00000340417 PRAMEF6Q5VXH4 476 aa11.33□□□□□ -0.6
LIN54-201ENST00000340417 DIRC2Q96SL1 478 aa11.33□□□□□ -0.6
LIN54-201ENST00000340417 THAP7Q9BT49 309 aaPredicted RBP11.33□□□□□ -0.6
LIN54-201ENST00000340417 ZNF703Q9H7S9 590 aaPredicted RBP11.33□□□□□ -0.6
LIN54-201ENST00000340417 OR6C68A6NDL8 312 aa11.32□□□□□ -0.6
LIN54-201ENST00000340417 UPK3AO75631 287 aa11.32□□□□□ -0.6
LIN54-201ENST00000340417 PMP2P02689 132 aa11.32□□□□□ -0.6
LIN54-201ENST00000340417 IL13RA1P78552 427 aa11.32□□□□□ -0.6
LIN54-201ENST00000340417 FOXO1Q12778 655 aa11.32□□□□□ -0.6
LIN54-201ENST00000340417 FAM58AQ8N1B3 248 aa11.32□□□□□ -0.6
LIN54-201ENST00000340417 MUC20Q8N307 709 aaPredicted RBP11.32□□□□□ -0.6
LIN54-201ENST00000340417 PELI1Q96FA3 418 aa11.32□□□□□ -0.6
LIN54-201ENST00000340417 OR2B2Q9GZK3 357 aa11.32□□□□□ -0.6
LIN54-201ENST00000340417 OR5B21A6NL26 309 aa11.32□□□□□ -0.6
LIN54-201ENST00000340417 C4orf51C9J302 202 aa11.32□□□□□ -0.6
LIN54-201ENST00000340417 BGLAPP02818 100 aa11.32□□□□□ -0.6
LIN54-201ENST00000340417 SSX9Q7RTT3 188 aa11.32□□□□□ -0.6
LIN54-201ENST00000340417 H2BFWTQ7Z2G1 175 aa11.32□□□□□ -0.6
LIN54-201ENST00000340417 GDPD1Q8N9F7 314 aa11.32□□□□□ -0.6
LIN54-201ENST00000340417 OR4Q3Q8NH05 313 aa11.32□□□□□ -0.6
LIN54-201ENST00000340417 PDCD11Q14690 1871 aaKnown RBP11.32□□□□□ -0.6
LIN54-201ENST00000340417 DUSP1P28562 367 aa11.32□□□□□ -0.6
LIN54-201ENST00000340417 OR3A4PP47883 348 aa11.32□□□□□ -0.6
LIN54-201ENST00000340417 TAS2R20P59543 309 aa11.32□□□□□ -0.6
LIN54-201ENST00000340417 MAB21L1Q13394 359 aa11.32□□□□□ -0.6
LIN54-201ENST00000340417 TPBGQ13641 420 aa11.32□□□□□ -0.6
LIN54-201ENST00000340417 PLA2G2CQ5R387 149 aa11.32□□□□□ -0.6
LIN54-201ENST00000340417 C1orf174Q8IYL3 243 aa11.32□□□□□ -0.6
LIN54-201ENST00000340417 PCGF1Q9BSM1 259 aa11.32□□□□□ -0.6
LIN54-201ENST00000340417 MSL2Q9HCI7 577 aa11.32□□□□□ -0.6
LIN54-201ENST00000340417 SLC7A10Q9NS82 523 aa11.32□□□□□ -0.6
LIN54-201ENST00000340417 TANC1Q9C0D5 1861 aa11.32□□□□□ -0.6
LIN54-201ENST00000340417 TMEM129A0AVI4 362 aa11.32□□□□□ -0.6
LIN54-201ENST00000340417 ALDH3B1P43353 468 aa11.32□□□□□ -0.6
LIN54-201ENST00000340417 AKR1C1Q04828 323 aa11.32□□□□□ -0.6
LIN54-201ENST00000340417 KCTD12Q96CX2 325 aaKnown RBP11.32□□□□□ -0.6
LIN54-201ENST00000340417 HEXA-AS1Q9H8Q6 139 aa11.32□□□□□ -0.6
LIN54-201ENST00000340417 HEYLQ9NQ87 328 aaPredicted RBP11.32□□□□□ -0.6
LIN54-201ENST00000340417 GOSR2O14653 212 aa11.32□□□□□ -0.6
LIN54-201ENST00000340417 TSPAN4O14817 238 aa11.32□□□□□ -0.6
LIN54-201ENST00000340417 RECKO95980 971 aa11.32□□□□□ -0.6
LIN54-201ENST00000340417 GSK3AP49840 483 aa11.32□□□□□ -0.6
LIN54-201ENST00000340417 FGL1Q08830 312 aa11.32□□□□□ -0.6
LIN54-201ENST00000340417 OR51H1Q8NH63 302 aa11.32□□□□□ -0.6
LIN54-201ENST00000340417 TXNL4BQ9NX01 149 aaKnown RBP11.32□□□□□ -0.6
LIN54-201ENST00000340417 CYCSP99999 105 aaKnown RBP11.31□□□□□ -0.6
LIN54-201ENST00000340417 ETFDHQ16134 617 aa11.31□□□□□ -0.6
LIN54-201ENST00000340417 AVPI1Q5T686 147 aa11.31□□□□□ -0.6
LIN54-201ENST00000340417 NHLRC1Q6VVB1 395 aa11.31□□□□□ -0.6
LIN54-201ENST00000340417 NANOGP1Q8N7R0 232 aa11.31□□□□□ -0.6
LIN54-201ENST00000340417 C7orf72A4D263 438 aa11.31□□□□□ -0.6
LIN54-201ENST00000340417 SLC9A3R2Q15599 337 aa11.31□□□□□ -0.6
LIN54-201ENST00000340417 ZNF658BQ4V348 819 aaPredicted RBP11.31□□□□□ -0.6
LIN54-201ENST00000340417 CD276Q5ZPR3 534 aa11.31□□□□□ -0.6
LIN54-201ENST00000340417 TMEM65Q6PI78 240 aa11.31□□□□□ -0.6
LIN54-201ENST00000340417 PDZD9Q8IXQ8 264 aa11.31□□□□□ -0.6
LIN54-201ENST00000340417 SNRNP40Q96DI7 357 aaKnown RBP11.31□□□□□ -0.6
LIN54-201ENST00000340417 PTDSS2Q9BVG9 487 aa11.31□□□□□ -0.6
LIN54-201ENST00000340417 CACNA1IQ9P0X4 2223 aa11.31□□□□□ -0.6
LIN54-201ENST00000340417 AKR7A2O43488 359 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms