RNA–Protein interactions for RNA: ENST00000340026.10

TRAF3IP2-201, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best) BASIC

Gene TRAF3IP2, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-201ENST00000340026 ACER2Q5QJU3 275 aa9.4□□□□□ -0.9
TRAF3IP2-201ENST00000340026 ZNF468Q5VIY5 522 aaPredicted RBP9.4□□□□□ -0.9
TRAF3IP2-201ENST00000340026 TMEM42Q69YG0 159 aa9.4□□□□□ -0.9
TRAF3IP2-201ENST00000340026 RFPL4BQ6ZWI9 263 aa9.4□□□□□ -0.9
TRAF3IP2-201ENST00000340026 TMUB2Q71RG4 321 aa9.4□□□□□ -0.9
TRAF3IP2-201ENST00000340026 CHMP1BQ7LBR1 199 aa9.4□□□□□ -0.9
TRAF3IP2-201ENST00000340026 OR8H3Q8N146 312 aa9.4□□□□□ -0.9
TRAF3IP2-201ENST00000340026 OR2V1Q8NHB1 315 aa9.4□□□□□ -0.9
TRAF3IP2-201ENST00000340026 SCARB1Q8WTV0 552 aa9.4□□□□□ -0.9
TRAF3IP2-201ENST00000340026 CT55Q8WUE5 264 aa9.4□□□□□ -0.9
TRAF3IP2-201ENST00000340026 ST8SIA4Q92187 359 aa9.4□□□□□ -0.9
TRAF3IP2-201ENST00000340026 ZNF799Q96GE5 643 aa9.4□□□□□ -0.9
TRAF3IP2-201ENST00000340026 TECTBQ96PL2 329 aa9.4□□□□□ -0.9
TRAF3IP2-201ENST00000340026 UCN2Q96RP3 112 aa9.4□□□□□ -0.9
TRAF3IP2-201ENST00000340026 OR10A2Q9H208 303 aa9.4□□□□□ -0.9
TRAF3IP2-201ENST00000340026 IFT46Q9NQC8 304 aa9.4□□□□□ -0.9
TRAF3IP2-201ENST00000340026 TMEM38BQ9NVV0 291 aa9.4□□□□□ -0.9
TRAF3IP2-201ENST00000340026 TEX51A0A1B0GUA7 166 aa9.4□□□□□ -0.91
TRAF3IP2-201ENST00000340026 C9orf170A2RU37 121 aa9.4□□□□□ -0.91
TRAF3IP2-201ENST00000340026 TSC22D2O75157 780 aa9.4□□□□□ -0.91
TRAF3IP2-201ENST00000340026 RP2O75695 350 aa9.4□□□□□ -0.91
TRAF3IP2-201ENST00000340026 OPN1LWP04000 364 aa9.4□□□□□ -0.91
TRAF3IP2-201ENST00000340026 SSTR2P30874 369 aa9.4□□□□□ -0.91
TRAF3IP2-201ENST00000340026 ECI1P42126 302 aa9.4□□□□□ -0.91
TRAF3IP2-201ENST00000340026 OR3A4PP47883 348 aa9.4□□□□□ -0.91
TRAF3IP2-201ENST00000340026 DCAF12L2Q5VW00 463 aa9.4□□□□□ -0.91
TRAF3IP2-201ENST00000340026 SLC51BQ86UW2 128 aa9.4□□□□□ -0.91
TRAF3IP2-201ENST00000340026 ZNF101Q8IZC7 436 aa9.4□□□□□ -0.91
TRAF3IP2-201ENST00000340026 PSMF1Q92530 271 aa9.4□□□□□ -0.91
TRAF3IP2-201ENST00000340026 CPNE4Q96A23 557 aaPredicted RBP9.4□□□□□ -0.91
TRAF3IP2-201ENST00000340026 LINC00470Q9BZP3 86 aa9.4□□□□□ -0.91
TRAF3IP2-201ENST00000340026 SELENOIQ9C0D9 397 aa9.4□□□□□ -0.91
TRAF3IP2-201ENST00000340026 RNF122Q9H9V4 155 aa9.4□□□□□ -0.91
TRAF3IP2-201ENST00000340026 PCSK5Q92824 1860 aa9.39□□□□□ -0.91
TRAF3IP2-201ENST00000340026 TRAV14DV4A0A0A6YYC5 116 aa9.39□□□□□ -0.91
TRAF3IP2-201ENST00000340026 E9PLN8 166 aa9.39□□□□□ -0.91
TRAF3IP2-201ENST00000340026 TNFSF11O14788 317 aa9.39□□□□□ -0.91
TRAF3IP2-201ENST00000340026 RRP8O43159 456 aaKnown RBP9.39□□□□□ -0.91
TRAF3IP2-201ENST00000340026 OR2F2O95006 317 aa9.39□□□□□ -0.91
TRAF3IP2-201ENST00000340026 CFDP00746 253 aaPredicted RBP9.39□□□□□ -0.91
TRAF3IP2-201ENST00000340026 SDHBP21912 280 aa9.39□□□□□ -0.91
TRAF3IP2-201ENST00000340026 CD34P28906 385 aa9.39□□□□□ -0.91
TRAF3IP2-201ENST00000340026 MPGP29372 298 aa9.39□□□□□ -0.91
TRAF3IP2-201ENST00000340026 FOXO1Q12778 655 aa9.39□□□□□ -0.91
TRAF3IP2-201ENST00000340026 OR2F1Q13607 317 aa9.39□□□□□ -0.91
TRAF3IP2-201ENST00000340026 PLA2G2CQ5R387 149 aa9.39□□□□□ -0.91
TRAF3IP2-201ENST00000340026 CHST4Q8NCG5 386 aa9.39□□□□□ -0.91
TRAF3IP2-201ENST00000340026 TMEM104Q8NE00 496 aa9.39□□□□□ -0.91
TRAF3IP2-201ENST00000340026 TERB2Q8NHR7 220 aa9.39□□□□□ -0.91
TRAF3IP2-201ENST00000340026 RELTQ969Z4 430 aa9.39□□□□□ -0.91
TRAF3IP2-201ENST00000340026 WBP1Q96G27 269 aa9.39□□□□□ -0.91
TRAF3IP2-201ENST00000340026 FAM71F1Q96KD3 344 aaPredicted RBP9.39□□□□□ -0.91
TRAF3IP2-201ENST00000340026 SOX7Q9BT81 388 aa9.39□□□□□ -0.91
TRAF3IP2-201ENST00000340026 SDK1Q7Z5N4 2213 aa9.39□□□□□ -0.91
TRAF3IP2-201ENST00000340026 EFSO43281 561 aa9.39□□□□□ -0.91
TRAF3IP2-201ENST00000340026 WDPCPO95876 746 aa9.39□□□□□ -0.91
TRAF3IP2-201ENST00000340026 HCKP08631 526 aa9.39□□□□□ -0.91
TRAF3IP2-201ENST00000340026 GNB3P16520 340 aa9.39□□□□□ -0.91
TRAF3IP2-201ENST00000340026 M6PRP20645 277 aa9.39□□□□□ -0.91
TRAF3IP2-201ENST00000340026 HRH1P35367 487 aa9.39□□□□□ -0.91
TRAF3IP2-201ENST00000340026 CARD18P57730 90 aa9.39□□□□□ -0.91
TRAF3IP2-201ENST00000340026 PCBD1P61457 104 aa9.39□□□□□ -0.91
TRAF3IP2-201ENST00000340026 PDSS1Q5T2R2 415 aa9.39□□□□□ -0.91
TRAF3IP2-201ENST00000340026 LIN54Q6MZP7 749 aa9.39□□□□□ -0.91
TRAF3IP2-201ENST00000340026 TIPARPQ7Z3E1 657 aaKnown RBP9.39□□□□□ -0.91
TRAF3IP2-201ENST00000340026 EIF4E3Q8N5X7 224 aaKnown RBP9.39□□□□□ -0.91
TRAF3IP2-201ENST00000340026 ESX1Q8N693 406 aa9.39□□□□□ -0.91
TRAF3IP2-201ENST00000340026 OR4S1Q8NGB4 309 aa9.39□□□□□ -0.91
TRAF3IP2-201ENST00000340026 OR4K15Q8NH41 348 aa9.39□□□□□ -0.91
TRAF3IP2-201ENST00000340026 NUDCD2Q8WVJ2 157 aa9.39□□□□□ -0.91
TRAF3IP2-201ENST00000340026 FBXO17Q96EF6 278 aa9.39□□□□□ -0.91
TRAF3IP2-201ENST00000340026 NECAB3Q96P71 396 aaPredicted RBP9.39□□□□□ -0.91
TRAF3IP2-201ENST00000340026 PHB2Q99623 299 aa9.39□□□□□ -0.91
TRAF3IP2-201ENST00000340026 NKX3-1Q99801 234 aaPredicted RBP9.39□□□□□ -0.91
TRAF3IP2-201ENST00000340026 GAL3ST1Q99999 423 aa9.39□□□□□ -0.91
TRAF3IP2-201ENST00000340026 DECR2Q9NUI1 292 aa9.39□□□□□ -0.91
TRAF3IP2-201ENST00000340026 IL36GQ9NZH8 169 aa9.39□□□□□ -0.91
TRAF3IP2-201ENST00000340026 HSF4Q9ULV5 492 aa9.39□□□□□ -0.91
TRAF3IP2-201ENST00000340026 GPR132Q9UNW8 380 aa9.39□□□□□ -0.91
TRAF3IP2-201ENST00000340026 HPNP05981 417 aa9.38□□□□□ -0.91
TRAF3IP2-201ENST00000340026 MGMTP16455 207 aa9.38□□□□□ -0.91
TRAF3IP2-201ENST00000340026 ANOS1P23352 680 aa9.38□□□□□ -0.91
TRAF3IP2-201ENST00000340026 CPT2P23786 658 aa9.38□□□□□ -0.91
TRAF3IP2-201ENST00000340026 PMELP40967 661 aa9.38□□□□□ -0.91
TRAF3IP2-201ENST00000340026 CYB561P49447 251 aa9.38□□□□□ -0.91
TRAF3IP2-201ENST00000340026 TAS2R46P59540 309 aa9.38□□□□□ -0.91
TRAF3IP2-201ENST00000340026 KCNRGQ8N5I3 272 aa9.38□□□□□ -0.91
TRAF3IP2-201ENST00000340026 DEFB123Q8N688 67 aa9.38□□□□□ -0.91
TRAF3IP2-201ENST00000340026 CMBLQ96DG6 245 aa9.38□□□□□ -0.91
TRAF3IP2-201ENST00000340026 NICN1Q9BSH3 213 aa9.38□□□□□ -0.91
TRAF3IP2-201ENST00000340026 ZMAT3Q9HA38 289 aaKnown RBP9.38□□□□□ -0.91
TRAF3IP2-201ENST00000340026 BOKQ9UMX3 212 aaPredicted RBP9.38□□□□□ -0.91
TRAF3IP2-201ENST00000340026 A0A0C4DFX4 3053 aa9.38□□□□□ -0.91
TRAF3IP2-201ENST00000340026 TRBV6-7A0A0A0MS04 114 aa9.38□□□□□ -0.91
TRAF3IP2-201ENST00000340026 RPL36A-HNRNPH2H7BZ11 118 aa9.38□□□□□ -0.91
TRAF3IP2-201ENST00000340026 SOCS1O15524 211 aa9.38□□□□□ -0.91
TRAF3IP2-201ENST00000340026 SGCEO43556 437 aa9.38□□□□□ -0.91
TRAF3IP2-201ENST00000340026 MPIG6BO95866 241 aa9.38□□□□□ -0.91
TRAF3IP2-201ENST00000340026 HLA-AP01891 365 aaKnown RBP9.38□□□□□ -0.91
TRAF3IP2-201ENST00000340026 SLC2A1P11166 492 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms