RNA–Protein interactions for RNA: ENST00000339701.7

CSMD3-202, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best)

Gene CSMD3, Length 10,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-202ENST00000339701 VASH2Q86V25 355 aa2.98□□□□□ -1.93
CSMD3-202ENST00000339701 LNX1Q8TBB1 728 aaPredicted RBP2.98□□□□□ -1.93
CSMD3-202ENST00000339701 SCAMP4Q969E2 229 aa2.98□□□□□ -1.93
CSMD3-202ENST00000339701 BCL2L10Q9HD36 194 aa2.98□□□□□ -1.93
CSMD3-202ENST00000339701 A0A087WV62 115 aa2.98□□□□□ -1.93
CSMD3-202ENST00000339701 PHF1O43189 567 aaPredicted RBP2.98□□□□□ -1.93
CSMD3-202ENST00000339701 GPX5O75715 221 aa2.98□□□□□ -1.93
CSMD3-202ENST00000339701 SEC11BP0C7V7 166 aa2.98□□□□□ -1.93
CSMD3-202ENST00000339701 SULT1A3P0DMM9 295 aa2.98□□□□□ -1.93
CSMD3-202ENST00000339701 SULT1A4P0DMN0 295 aa2.98□□□□□ -1.93
CSMD3-202ENST00000339701 BRS3P32247 399 aa2.98□□□□□ -1.93
CSMD3-202ENST00000339701 APOBEC1P41238 236 aaKnown RBP2.98□□□□□ -1.93
CSMD3-202ENST00000339701 AMTP48728 403 aa2.98□□□□□ -1.93
CSMD3-202ENST00000339701 MEOX1P50221 254 aa2.98□□□□□ -1.93
CSMD3-202ENST00000339701 FXYD6P3P58550 94 aa2.98□□□□□ -1.93
CSMD3-202ENST00000339701 HSPB3Q12988 150 aa2.98□□□□□ -1.93
CSMD3-202ENST00000339701 AFMIDQ63HM1 303 aa2.98□□□□□ -1.93
CSMD3-202ENST00000339701 LINC00346Q8IVM7 164 aa2.98□□□□□ -1.93
CSMD3-202ENST00000339701 DYNLRB2Q8TF09 96 aa2.98□□□□□ -1.93
CSMD3-202ENST00000339701 ZNF516Q92618 1163 aa2.98□□□□□ -1.93
CSMD3-202ENST00000339701 ZNF845Q96IR2 970 aaPredicted RBP2.98□□□□□ -1.93
CSMD3-202ENST00000339701 OR51I1Q9H343 314 aa2.98□□□□□ -1.93
CSMD3-202ENST00000339701 CACNG5Q9UF02 275 aa2.98□□□□□ -1.93
CSMD3-202ENST00000339701 ISLRO14498 428 aa2.98□□□□□ -1.93
CSMD3-202ENST00000339701 KLF4O43474 513 aa2.98□□□□□ -1.93
CSMD3-202ENST00000339701 CST4P01036 141 aa2.98□□□□□ -1.93
CSMD3-202ENST00000339701 BCHEP06276 602 aa2.98□□□□□ -1.93
CSMD3-202ENST00000339701 PTNP21246 168 aa2.98□□□□□ -1.93
CSMD3-202ENST00000339701 STARD6P59095 220 aa2.98□□□□□ -1.93
CSMD3-202ENST00000339701 KLF1Q13351 362 aaPredicted RBP2.98□□□□□ -1.93
CSMD3-202ENST00000339701 APOFQ13790 326 aa2.98□□□□□ -1.93
CSMD3-202ENST00000339701 COL19A1Q14993 1142 aa2.98□□□□□ -1.93
CSMD3-202ENST00000339701 JOSD1Q15040 202 aaPredicted RBP2.98□□□□□ -1.93
CSMD3-202ENST00000339701 GLYR1Q49A26 553 aaPredicted RBP2.98□□□□□ -1.93
CSMD3-202ENST00000339701 TRMT12Q53H54 448 aaKnown RBP2.98□□□□□ -1.93
CSMD3-202ENST00000339701 CLLU1OSQ5K130 101 aa2.98□□□□□ -1.93
CSMD3-202ENST00000339701 NPEPL1Q8NDH3 523 aa2.98□□□□□ -1.93
CSMD3-202ENST00000339701 NFAM1Q8NET5 270 aaPredicted RBP2.98□□□□□ -1.93
CSMD3-202ENST00000339701 OR1L4Q8NGR5 311 aa2.98□□□□□ -1.93
CSMD3-202ENST00000339701 OR2I1PQ8NGU4 316 aa2.98□□□□□ -1.93
CSMD3-202ENST00000339701 ST8SIA2Q92186 375 aa2.98□□□□□ -1.93
CSMD3-202ENST00000339701 ISL2Q96A47 359 aa2.98□□□□□ -1.93
CSMD3-202ENST00000339701 WDFY2Q96P53 400 aa2.98□□□□□ -1.93
CSMD3-202ENST00000339701 P2RX4Q99571 388 aa2.98□□□□□ -1.93
CSMD3-202ENST00000339701 DEFB127Q9H1M4 99 aa2.98□□□□□ -1.93
CSMD3-202ENST00000339701 CHST8Q9H2A9 424 aa2.98□□□□□ -1.93
CSMD3-202ENST00000339701 LIN28AQ9H9Z2 209 aaKnown RBP2.98□□□□□ -1.93
CSMD3-202ENST00000339701 AMBNQ9NP70 447 aa2.98□□□□□ -1.93
CSMD3-202ENST00000339701 AMMECR1Q9Y4X0 333 aaPredicted RBP2.98□□□□□ -1.93
CSMD3-202ENST00000339701 TRGV5A0A0B4J1U4 118 aa2.98□□□□□ -1.93
CSMD3-202ENST00000339701 A0A0B4J2A0 478 aa2.98□□□□□ -1.93
CSMD3-202ENST00000339701 M0R1B8 84 aa2.98□□□□□ -1.93
CSMD3-202ENST00000339701 DEGS1O15121 323 aa2.98□□□□□ -1.93
CSMD3-202ENST00000339701 CD1AP06126 327 aa2.98□□□□□ -1.93
CSMD3-202ENST00000339701 TIMP2P16035 220 aa2.98□□□□□ -1.93
CSMD3-202ENST00000339701 GPX2P18283 190 aa2.98□□□□□ -1.93
CSMD3-202ENST00000339701 ZFP36L2P47974 494 aaKnown RBP2.98□□□□□ -1.93
CSMD3-202ENST00000339701 ACSM5Q6NUN0 579 aa2.98□□□□□ -1.93
CSMD3-202ENST00000339701 TCF23Q7RTU1 214 aa2.98□□□□□ -1.93
CSMD3-202ENST00000339701 TGIF2LXQ8IUE1 241 aa2.98□□□□□ -1.93
CSMD3-202ENST00000339701 PIGCQ92535 297 aa2.98□□□□□ -1.93
CSMD3-202ENST00000339701 DYRK2Q92630 601 aa2.98□□□□□ -1.93
CSMD3-202ENST00000339701 RSG1Q9BU20 258 aa2.98□□□□□ -1.93
CSMD3-202ENST00000339701 R3HDMLQ9H3Y0 253 aa2.98□□□□□ -1.93
CSMD3-202ENST00000339701 EBF1Q9UH73 591 aa2.98□□□□□ -1.93
CSMD3-202ENST00000339701 SHPKQ9UHJ6 478 aa2.98□□□□□ -1.93
CSMD3-202ENST00000339701 USF3Q68DE3 2245 aa2.98□□□□□ -1.93
CSMD3-202ENST00000339701 HELTA6NFD8 242 aa2.98□□□□□ -1.93
CSMD3-202ENST00000339701 TXNL1O43396 289 aa2.98□□□□□ -1.93
CSMD3-202ENST00000339701 GCGP01275 180 aa2.98□□□□□ -1.93
CSMD3-202ENST00000339701 HLA-DQA1P01909 254 aa2.98□□□□□ -1.93
CSMD3-202ENST00000339701 CD5P06127 495 aa2.98□□□□□ -1.93
CSMD3-202ENST00000339701 GNB3P16520 340 aa2.98□□□□□ -1.93
CSMD3-202ENST00000339701 APEX1P27695 318 aaKnown RBP2.98□□□□□ -1.93
CSMD3-202ENST00000339701 MAT1AQ00266 395 aaKnown RBP2.98□□□□□ -1.93
CSMD3-202ENST00000339701 ADPRMQ3LIE5 342 aa2.98□□□□□ -1.93
CSMD3-202ENST00000339701 BCL7AQ4VC05 210 aa2.98□□□□□ -1.93
CSMD3-202ENST00000339701 UNC50Q53HI1 259 aa2.98□□□□□ -1.93
CSMD3-202ENST00000339701 UBE2UQ5VVX9 321 aa2.98□□□□□ -1.93
CSMD3-202ENST00000339701 LETMD1Q6P1Q0 360 aa2.98□□□□□ -1.93
CSMD3-202ENST00000339701 FA2HQ7L5A8 372 aa2.98□□□□□ -1.93
CSMD3-202ENST00000339701 ZNF761Q86XN6 746 aaPredicted RBP2.98□□□□□ -1.93
CSMD3-202ENST00000339701 MEX3DQ86XN8 651 aaKnown RBP2.98□□□□□ -1.93
CSMD3-202ENST00000339701 RBPMSQ93062 196 aaKnown RBP2.98□□□□□ -1.93
CSMD3-202ENST00000339701 SLC25A28Q96A46 364 aa2.98□□□□□ -1.93
CSMD3-202ENST00000339701 NEURL3Q96EH8 262 aa2.98□□□□□ -1.93
CSMD3-202ENST00000339701 MUS81Q96NY9 551 aa2.98□□□□□ -1.93
CSMD3-202ENST00000339701 SORBS1Q9BX66 1292 aaKnown RBP2.98□□□□□ -1.93
CSMD3-202ENST00000339701 OR51I2Q9H344 312 aa2.98□□□□□ -1.93
CSMD3-202ENST00000339701 C5AR2Q9P296 337 aa2.98□□□□□ -1.93
CSMD3-202ENST00000339701 TAC3Q9UHF0 121 aa2.98□□□□□ -1.93
CSMD3-202ENST00000339701 PCDHGA7Q9Y5G6 932 aa2.98□□□□□ -1.93
CSMD3-202ENST00000339701 SLCO1B1Q9Y6L6 691 aa2.98□□□□□ -1.93
CSMD3-202ENST00000339701 A0A1B0GTI1 187 aa2.97□□□□□ -1.93
CSMD3-202ENST00000339701 OR2M5A3KFT3 312 aa2.97□□□□□ -1.93
CSMD3-202ENST00000339701 PRAMEF27A3QJZ7 478 aa2.97□□□□□ -1.93
CSMD3-202ENST00000339701 PRAMEF25A6NGN4 478 aa2.97□□□□□ -1.93
CSMD3-202ENST00000339701 DHRS7CA6NNS2 312 aa2.97□□□□□ -1.93
CSMD3-202ENST00000339701 H3BMH7 237 aa2.97□□□□□ -1.93
CSMD3-202ENST00000339701 TBX19O60806 448 aa2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms