RNA–Protein interactions for RNA: ENST00000337841.4

SPTLC1-202, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SPTLC1, Length 946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-202ENST00000337841 HHLA2Q9UM44 414 aa10.13□□□□□ -0.79
SPTLC1-202ENST00000337841 PIGLQ9Y2B2 252 aa10.13□□□□□ -0.79
SPTLC1-202ENST00000337841 RHBDD3Q9Y3P4 386 aa10.13□□□□□ -0.79
SPTLC1-202ENST00000337841 V9GYS6 101 aa10.13□□□□□ -0.79
SPTLC1-202ENST00000337841 PLCE1Q9P212 2302 aa10.12□□□□□ -0.79
SPTLC1-202ENST00000337841 NOTCH2Q04721 2471 aa10.12□□□□□ -0.79
SPTLC1-202ENST00000337841 A0A1B0GWJ7 208 aa10.12□□□□□ -0.79
SPTLC1-202ENST00000337841 DHRS7CA6NNS2 312 aa10.12□□□□□ -0.79
SPTLC1-202ENST00000337841 H0YL77 283 aa10.12□□□□□ -0.79
SPTLC1-202ENST00000337841 LILRA1O75019 489 aa10.12□□□□□ -0.79
SPTLC1-202ENST00000337841 HPXP02790 462 aa10.12□□□□□ -0.79
SPTLC1-202ENST00000337841 MT-ND2P03891 347 aa10.12□□□□□ -0.79
SPTLC1-202ENST00000337841 HLA-DPB1P04440 258 aa10.12□□□□□ -0.79
SPTLC1-202ENST00000337841 CSF3P09919 207 aa10.12□□□□□ -0.79
SPTLC1-202ENST00000337841 ACHEP22303 614 aa10.12□□□□□ -0.79
SPTLC1-202ENST00000337841 CRYBB2P43320 205 aa10.12□□□□□ -0.79
SPTLC1-202ENST00000337841 PDLIM4P50479 330 aa10.12□□□□□ -0.79
SPTLC1-202ENST00000337841 TNK1Q13470 666 aa10.12□□□□□ -0.79
SPTLC1-202ENST00000337841 IRF3Q14653 427 aa10.12□□□□□ -0.79
SPTLC1-202ENST00000337841 MED22Q15528 200 aa10.12□□□□□ -0.79
SPTLC1-202ENST00000337841 TESK1Q15569 626 aa10.12□□□□□ -0.79
SPTLC1-202ENST00000337841 CARTPTQ16568 116 aa10.12□□□□□ -0.79
SPTLC1-202ENST00000337841 CLEC12BQ2HXU8 276 aa10.12□□□□□ -0.79
SPTLC1-202ENST00000337841 CLEC2AQ6UVW9 174 aa10.12□□□□□ -0.79
SPTLC1-202ENST00000337841 Q6ZSR3 168 aa10.12□□□□□ -0.79
SPTLC1-202ENST00000337841 KRT74Q7RTS7 529 aa10.12□□□□□ -0.79
SPTLC1-202ENST00000337841 SVOPQ8N4V2 548 aa10.12□□□□□ -0.79
SPTLC1-202ENST00000337841 CELF2-AS1Q8N7Q2 184 aa10.12□□□□□ -0.79
SPTLC1-202ENST00000337841 ZNF485Q8NCK3 441 aa10.12□□□□□ -0.79
SPTLC1-202ENST00000337841 OR14K1Q8NGZ2 314 aa10.12□□□□□ -0.79
SPTLC1-202ENST00000337841 SGCDQ92629 289 aa10.12□□□□□ -0.79
SPTLC1-202ENST00000337841 C10orf35Q96D05 121 aa10.12□□□□□ -0.79
SPTLC1-202ENST00000337841 MICU1Q9BPX6 476 aa10.12□□□□□ -0.79
SPTLC1-202ENST00000337841 SOX7Q9BT81 388 aa10.12□□□□□ -0.79
SPTLC1-202ENST00000337841 SAP30LQ9HAJ7 183 aa10.12□□□□□ -0.79
SPTLC1-202ENST00000337841 PLEKHA1Q9HB21 404 aa10.12□□□□□ -0.79
SPTLC1-202ENST00000337841 DSCAMO60469 2012 aa10.12□□□□□ -0.79
SPTLC1-202ENST00000337841 DCHS2Q6V1P9 2916 aa10.12□□□□□ -0.79
SPTLC1-202ENST00000337841 AKAP6Q13023 2319 aa10.11□□□□□ -0.79
SPTLC1-202ENST00000337841 IGHV1-69-2A0A0G2JMI3 117 aa10.11□□□□□ -0.79
SPTLC1-202ENST00000337841 LOC107986453A0A1B0GWG9 222 aa10.11□□□□□ -0.79
SPTLC1-202ENST00000337841 CYSRT1A8MQ03 144 aa10.11□□□□□ -0.79
SPTLC1-202ENST00000337841 ZNF850A8MQ14 1090 aa10.11□□□□□ -0.79
SPTLC1-202ENST00000337841 F5H5P2 479 aa10.11□□□□□ -0.79
SPTLC1-202ENST00000337841 IFNL4K9M1U5 179 aa10.11□□□□□ -0.79
SPTLC1-202ENST00000337841 MLNRO43193 412 aa10.11□□□□□ -0.79
SPTLC1-202ENST00000337841 ZFPL1O95159 310 aa10.11□□□□□ -0.79
SPTLC1-202ENST00000337841 NRASP01111 189 aa10.11□□□□□ -0.79
SPTLC1-202ENST00000337841 COL8A2P25067 703 aa10.11□□□□□ -0.79
SPTLC1-202ENST00000337841 ACKR3P25106 362 aa10.11□□□□□ -0.79
SPTLC1-202ENST00000337841 TMEM33P57088 247 aa10.11□□□□□ -0.79
SPTLC1-202ENST00000337841 BDH1Q02338 343 aa10.11□□□□□ -0.79
SPTLC1-202ENST00000337841 SLC3A1Q07837 685 aa10.11□□□□□ -0.79
SPTLC1-202ENST00000337841 ACSM1Q08AH1 577 aa10.11□□□□□ -0.79
SPTLC1-202ENST00000337841 PRDX4Q13162 271 aa10.11□□□□□ -0.79
SPTLC1-202ENST00000337841 CDK5R1Q15078 307 aa10.11□□□□□ -0.79
SPTLC1-202ENST00000337841 HFEQ30201 348 aa10.11□□□□□ -0.79
SPTLC1-202ENST00000337841 Q5PR19 223 aa10.11□□□□□ -0.79
SPTLC1-202ENST00000337841 CLVS2Q5SYC1 327 aa10.11□□□□□ -0.79
SPTLC1-202ENST00000337841 MOB3CQ70IA8 216 aa10.11□□□□□ -0.79
SPTLC1-202ENST00000337841 ZDHHC23Q8IYP9 409 aa10.11□□□□□ -0.79
SPTLC1-202ENST00000337841 OR10AD1Q8NGE0 317 aa10.11□□□□□ -0.79
SPTLC1-202ENST00000337841 ITLN1Q8WWA0 313 aa10.11□□□□□ -0.79
SPTLC1-202ENST00000337841 FAM168AQ92567 244 aa10.11□□□□□ -0.79
SPTLC1-202ENST00000337841 ERGIC1Q969X5 290 aa10.11□□□□□ -0.79
SPTLC1-202ENST00000337841 FGGYQ96C11 551 aa10.11□□□□□ -0.79
SPTLC1-202ENST00000337841 RNF170Q96K19 258 aa10.11□□□□□ -0.79
SPTLC1-202ENST00000337841 MEGF10Q96KG7 1140 aa10.11□□□□□ -0.79
SPTLC1-202ENST00000337841 OR2V2Q96R30 315 aa10.11□□□□□ -0.79
SPTLC1-202ENST00000337841 ADAT1Q9BUB4 502 aaKnown RBP10.11□□□□□ -0.79
SPTLC1-202ENST00000337841 RTL8AQ9BWD3 113 aa10.11□□□□□ -0.79
SPTLC1-202ENST00000337841 LRCH1Q9Y2L9 728 aa10.11□□□□□ -0.79
SPTLC1-202ENST00000337841 ZNF281Q9Y2X9 895 aa10.11□□□□□ -0.79
SPTLC1-202ENST00000337841 APCP25054 2843 aa10.11□□□□□ -0.79
SPTLC1-202ENST00000337841 FBN2P35556 2912 aa10.11□□□□□ -0.79
SPTLC1-202ENST00000337841 RAI1Q7Z5J4 1906 aaPredicted RBP10.11□□□□□ -0.79
SPTLC1-202ENST00000337841 NAV2Q8IVL1 2488 aa10.11□□□□□ -0.79
SPTLC1-202ENST00000337841 H3BSH0 61 aa10.1□□□□□ -0.79
SPTLC1-202ENST00000337841 NDUFS8O00217 210 aa10.1□□□□□ -0.79
SPTLC1-202ENST00000337841 CDC14BO60729 498 aa10.1□□□□□ -0.79
SPTLC1-202ENST00000337841 LY6HO94772 140 aa10.1□□□□□ -0.79
SPTLC1-202ENST00000337841 CD1AP06126 327 aa10.1□□□□□ -0.79
SPTLC1-202ENST00000337841 FAHP16930 419 aa10.1□□□□□ -0.79
SPTLC1-202ENST00000337841 ZNF20P17024 532 aa10.1□□□□□ -0.79
SPTLC1-202ENST00000337841 CELP19835 753 aa10.1□□□□□ -0.79
SPTLC1-202ENST00000337841 CD200P41217 278 aa10.1□□□□□ -0.79
SPTLC1-202ENST00000337841 MAP2K4P45985 399 aa10.1□□□□□ -0.79
SPTLC1-202ENST00000337841 CHN2P52757 468 aa10.1□□□□□ -0.79
SPTLC1-202ENST00000337841 GPR50Q13585 617 aa10.1□□□□□ -0.79
SPTLC1-202ENST00000337841 CEACAM21Q3KPI0 293 aa10.1□□□□□ -0.79
SPTLC1-202ENST00000337841 DMKNQ6E0U4 476 aaPredicted RBP10.1□□□□□ -0.79
SPTLC1-202ENST00000337841 XAF1Q6GPH4 301 aa10.1□□□□□ -0.79
SPTLC1-202ENST00000337841 OR5A2Q8NGI9 324 aa10.1□□□□□ -0.79
SPTLC1-202ENST00000337841 OR13C3Q8NGS6 347 aa10.1□□□□□ -0.79
SPTLC1-202ENST00000337841 GPR148Q8TDV2 347 aa10.1□□□□□ -0.79
SPTLC1-202ENST00000337841 PP6455Q8WZ26 134 aa10.1□□□□□ -0.79
SPTLC1-202ENST00000337841 OR5P3Q8WZ94 311 aa10.1□□□□□ -0.79
SPTLC1-202ENST00000337841 CCL17Q92583 94 aa10.1□□□□□ -0.79
SPTLC1-202ENST00000337841 GHSRQ92847 366 aa10.1□□□□□ -0.79
SPTLC1-202ENST00000337841 SMIM19Q96E16 107 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms