RNA–Protein interactions for RNA: ENST00000334895.9

TPM1-204, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-204ENST00000334895 RHBDD3Q9Y3P4 386 aa18.42■□□□□ 0.54
TPM1-204ENST00000334895 HRNRQ86YZ3 2850 aaPredicted RBP18.42■□□□□ 0.54
TPM1-204ENST00000334895 E7EQL1 145 aa18.41■□□□□ 0.54
TPM1-204ENST00000334895 ZNF701M0R085 212 aaPredicted RBP18.41■□□□□ 0.54
TPM1-204ENST00000334895 ARL6IP5O75915 188 aa18.41■□□□□ 0.54
TPM1-204ENST00000334895 ZNF20P17024 532 aa18.41■□□□□ 0.54
TPM1-204ENST00000334895 FSTP19883 344 aa18.41■□□□□ 0.54
TPM1-204ENST00000334895 RPS23P62266 143 aaKnown RBP18.41■□□□□ 0.54
TPM1-204ENST00000334895 DAZAP2Q15038 168 aaPredicted RBP18.41■□□□□ 0.54
TPM1-204ENST00000334895 TMEM42Q69YG0 159 aa18.41■□□□□ 0.54
TPM1-204ENST00000334895 ZNF529Q6P280 563 aa18.41■□□□□ 0.54
TPM1-204ENST00000334895 KRT74Q7RTS7 529 aa18.41■□□□□ 0.54
TPM1-204ENST00000334895 BHLHE23Q8NDY6 225 aa18.41■□□□□ 0.54
TPM1-204ENST00000334895 C10orf35Q96D05 121 aa18.41■□□□□ 0.54
TPM1-204ENST00000334895 SPOCK3Q9BQ16 436 aa18.41■□□□□ 0.54
TPM1-204ENST00000334895 FAM192AQ9GZU8 254 aa18.41■□□□□ 0.54
TPM1-204ENST00000334895 ZNF442Q9H7R0 627 aa18.41■□□□□ 0.54
TPM1-204ENST00000334895 MYEF2Q9P2K5 600 aaKnown RBP18.41■□□□□ 0.54
TPM1-204ENST00000334895 PURGQ9UJV8 347 aaKnown RBP18.41■□□□□ 0.54
TPM1-204ENST00000334895 POU2F3Q9UKI9 436 aa18.41■□□□□ 0.54
TPM1-204ENST00000334895 SRMP19623 302 aa18.41■□□□□ 0.54
TPM1-204ENST00000334895 KITLGP21583 273 aa18.41■□□□□ 0.54
TPM1-204ENST00000334895 SERPINA12Q8IW75 414 aa18.41■□□□□ 0.54
TPM1-204ENST00000334895 OR5AS1Q8N127 324 aa18.41■□□□□ 0.54
TPM1-204ENST00000334895 OR51A2Q8NGJ7 313 aa18.41■□□□□ 0.54
TPM1-204ENST00000334895 UBASH3BQ8TF42 649 aa18.41■□□□□ 0.54
TPM1-204ENST00000334895 SLC30A2Q9BRI3 323 aa18.41■□□□□ 0.54
TPM1-204ENST00000334895 MRPL37Q9BZE1 423 aaKnown RBP18.41■□□□□ 0.54
TPM1-204ENST00000334895 CHST5Q9GZS9 411 aa18.41■□□□□ 0.54
TPM1-204ENST00000334895 IGLV3-9A0A075B6K5 115 aa18.4■□□□□ 0.54
TPM1-204ENST00000334895 ZNF816-ZNF321PA0A0X1KG74 233 aa18.4■□□□□ 0.54
TPM1-204ENST00000334895 IQCF6A8MYZ5 107 aa18.4■□□□□ 0.54
TPM1-204ENST00000334895 NOL3O60936 208 aaKnown RBP18.4■□□□□ 0.54
TPM1-204ENST00000334895 GCH1P30793 250 aa18.4■□□□□ 0.54
TPM1-204ENST00000334895 SDC2P34741 201 aa18.4■□□□□ 0.54
TPM1-204ENST00000334895 GNALP38405 381 aa18.4■□□□□ 0.54
TPM1-204ENST00000334895 DDOSTP39656 456 aa18.4■□□□□ 0.54
TPM1-204ENST00000334895 ADIPOQQ15848 244 aa18.4■□□□□ 0.54
TPM1-204ENST00000334895 DMRTC1Q5HYR2 192 aa18.4■□□□□ 0.54
TPM1-204ENST00000334895 ZBTB37Q5TC79 503 aa18.4■□□□□ 0.54
TPM1-204ENST00000334895 LRRTM1Q86UE6 522 aa18.4■□□□□ 0.54
TPM1-204ENST00000334895 CSNK2A3Q8NEV1 391 aa18.4■□□□□ 0.54
TPM1-204ENST00000334895 OR13C9Q8NGT0 318 aa18.4■□□□□ 0.54
TPM1-204ENST00000334895 SYNPRQ8TBG9 265 aa18.4■□□□□ 0.54
TPM1-204ENST00000334895 ITFG2Q969R8 447 aa18.4■□□□□ 0.54
TPM1-204ENST00000334895 MRPL24Q96A35 216 aaKnown RBP18.4■□□□□ 0.54
TPM1-204ENST00000334895 SYT3Q9BQG1 590 aa18.4■□□□□ 0.54
TPM1-204ENST00000334895 TRAV1-2A0A0B4J238 106 aa18.39■□□□□ 0.53
TPM1-204ENST00000334895 IGKV1-9A0A0C4DH69 117 aa18.39■□□□□ 0.53
TPM1-204ENST00000334895 A0A1W2PPR1 153 aa18.39■□□□□ 0.53
TPM1-204ENST00000334895 TRIM64BA6NI03 449 aa18.39■□□□□ 0.53
TPM1-204ENST00000334895 SLC22A1O15245 554 aa18.39■□□□□ 0.53
TPM1-204ENST00000334895 CLEC2LP0C7M8 214 aa18.39■□□□□ 0.53
TPM1-204ENST00000334895 ADRA2CP18825 462 aa18.39■□□□□ 0.53
TPM1-204ENST00000334895 UBE2V2Q15819 145 aa18.39■□□□□ 0.53
TPM1-204ENST00000334895 PP6455Q8WZ26 134 aa18.39■□□□□ 0.53
TPM1-204ENST00000334895 GFI1Q99684 422 aa18.39■□□□□ 0.53
TPM1-204ENST00000334895 ZCCHC4Q9H5U6 513 aa18.39■□□□□ 0.53
TPM1-204ENST00000334895 DUSP13Q9UII6 198 aa18.39■□□□□ 0.53
TPM1-204ENST00000334895 FOXJ3Q9UPW0 622 aa18.39■□□□□ 0.53
TPM1-204ENST00000334895 CMAHPQ9Y471 501 aa18.39■□□□□ 0.53
TPM1-204ENST00000334895 GMDSO60547 372 aa18.38■□□□□ 0.53
TPM1-204ENST00000334895 CST4P01036 141 aa18.38■□□□□ 0.53
TPM1-204ENST00000334895 IGHV3-13P01766 116 aa18.38■□□□□ 0.53
TPM1-204ENST00000334895 SELEP16581 610 aa18.38■□□□□ 0.53
TPM1-204ENST00000334895 SERPINB10P48595 397 aa18.38■□□□□ 0.53
TPM1-204ENST00000334895 MTNR1BP49286 362 aa18.38■□□□□ 0.53
TPM1-204ENST00000334895 SP5Q6BEB4 398 aaPredicted RBP18.38■□□□□ 0.53
TPM1-204ENST00000334895 UTS2BQ765I0 119 aa18.38■□□□□ 0.53
TPM1-204ENST00000334895 NR2C2APQ86WQ0 139 aa18.38■□□□□ 0.53
TPM1-204ENST00000334895 OR5D14Q8NGL3 314 aa18.38■□□□□ 0.53
TPM1-204ENST00000334895 GPR173Q9NS66 373 aa18.38■□□□□ 0.53
TPM1-204ENST00000334895 SNTG1Q9NSN8 517 aa18.38■□□□□ 0.53
TPM1-204ENST00000334895 KCNN3Q9UGI6 736 aa18.38■□□□□ 0.53
TPM1-204ENST00000334895 GPR160Q9UJ42 338 aa18.38■□□□□ 0.53
TPM1-204ENST00000334895 CRYBG3Q68DQ2 2970 aa18.38■□□□□ 0.53
TPM1-204ENST00000334895 A6NNC1 897 aa18.38■□□□□ 0.53
TPM1-204ENST00000334895 CDRT1O95170 752 aa18.38■□□□□ 0.53
TPM1-204ENST00000334895 OR4A8P0C604 315 aa18.38■□□□□ 0.53
TPM1-204ENST00000334895 MYL9P24844 172 aa18.38■□□□□ 0.53
TPM1-204ENST00000334895 KLF3P57682 345 aaPredicted RBP18.38■□□□□ 0.53
TPM1-204ENST00000334895 ZNF672Q499Z4 452 aaPredicted RBP18.38■□□□□ 0.53
TPM1-204ENST00000334895 CEP78Q5JTW2 689 aa18.38■□□□□ 0.53
TPM1-204ENST00000334895 CLVS2Q5SYC1 327 aa18.38■□□□□ 0.53
TPM1-204ENST00000334895 OR1M1Q8NGA1 313 aa18.38■□□□□ 0.53
TPM1-204ENST00000334895 PIGCQ92535 297 aa18.38■□□□□ 0.53
TPM1-204ENST00000334895 DVL3Q92997 716 aaPredicted RBP18.38■□□□□ 0.53
TPM1-204ENST00000334895 PIGTQ969N2 578 aa18.38■□□□□ 0.53
TPM1-204ENST00000334895 PAPOLGQ9BWT3 736 aaKnown RBP18.38■□□□□ 0.53
TPM1-204ENST00000334895 DCSTAMPQ9H295 470 aa18.38■□□□□ 0.53
TPM1-204ENST00000334895 TCF7L1Q9HCS4 588 aa18.38■□□□□ 0.53
TPM1-204ENST00000334895 MRPL15Q9P015 296 aaKnown RBP18.38■□□□□ 0.53
TPM1-204ENST00000334895 ASH1LQ9NR48 2969 aaKnown RBP18.37■□□□□ 0.53
TPM1-204ENST00000334895 A0A1W2PPW3 197 aa18.37■□□□□ 0.53
TPM1-204ENST00000334895 SMIM30A4D0T7 59 aa18.37■□□□□ 0.53
TPM1-204ENST00000334895 ZNF850A8MQ14 1090 aa18.37■□□□□ 0.53
TPM1-204ENST00000334895 TIMM8AO60220 97 aaPredicted RBP18.37■□□□□ 0.53
TPM1-204ENST00000334895 GOSR1O95249 250 aa18.37■□□□□ 0.53
TPM1-204ENST00000334895 MAS1P04201 325 aa18.37■□□□□ 0.53
TPM1-204ENST00000334895 RPS19P39019 145 aaKnown RBP18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms