RNA–Protein interactions for RNA: ENST00000333090.4

TSKU-201, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSKU, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-201ENST00000333090 H1FNTQ75WM6 255 aaPredicted RBP20.9■□□□□ 0.94
TSKU-201ENST00000333090 PEG10Q86TG7 708 aaKnown RBP20.9■□□□□ 0.94
TSKU-201ENST00000333090 DEFB119Q8N690 84 aa20.9■□□□□ 0.94
TSKU-201ENST00000333090 C1orf147Q96MC9 270 aaPredicted RBP20.9■□□□□ 0.94
TSKU-201ENST00000333090 NUDT22Q9BRQ3 303 aa20.9■□□□□ 0.94
TSKU-201ENST00000333090 COPS7AQ9UBW8 275 aa20.9■□□□□ 0.94
TSKU-201ENST00000333090 ANAPC10Q9UM13 185 aa20.9■□□□□ 0.94
TSKU-201ENST00000333090 HCKP08631 526 aa20.89■□□□□ 0.93
TSKU-201ENST00000333090 P2RY4P51582 365 aa20.89■□□□□ 0.93
TSKU-201ENST00000333090 AADACL3Q5VUY0 350 aa20.89■□□□□ 0.93
TSKU-201ENST00000333090 BTNL8Q6UX41 500 aa20.89■□□□□ 0.93
TSKU-201ENST00000333090 Q6ZRG5 221 aa20.89■□□□□ 0.93
TSKU-201ENST00000333090 Q7L0L9 218 aa20.89■□□□□ 0.93
TSKU-201ENST00000333090 GALNTL5Q7Z4T8 443 aa20.89■□□□□ 0.93
TSKU-201ENST00000333090 GPER1Q99527 375 aa20.89■□□□□ 0.93
TSKU-201ENST00000333090 PARP12Q9H0J9 701 aaKnown RBP20.89■□□□□ 0.93
TSKU-201ENST00000333090 RPS10P5Q9NQ39 176 aa20.89■□□□□ 0.93
TSKU-201ENST00000333090 POLR1DQ9Y2S0 133 aa20.89■□□□□ 0.93
TSKU-201ENST00000333090 THADAQ6YHU6 1953 aa20.89■□□□□ 0.93
TSKU-201ENST00000333090 MFNGO00587 321 aa20.89■□□□□ 0.93
TSKU-201ENST00000333090 ADH6P28332 368 aa20.89■□□□□ 0.93
TSKU-201ENST00000333090 SULT1A2P50226 295 aa20.89■□□□□ 0.93
TSKU-201ENST00000333090 ECH1Q13011 328 aa20.89■□□□□ 0.93
TSKU-201ENST00000333090 OR5AS1Q8N127 324 aa20.89■□□□□ 0.93
TSKU-201ENST00000333090 FBXO17Q96EF6 278 aa20.89■□□□□ 0.93
TSKU-201ENST00000333090 SRPK3Q9UPE1 567 aa20.89■□□□□ 0.93
TSKU-201ENST00000333090 OR8U9P0C7N5 309 aa20.88■□□□□ 0.93
TSKU-201ENST00000333090 HKR1P10072 659 aa20.88■□□□□ 0.93
TSKU-201ENST00000333090 FOLR2P14207 255 aa20.88■□□□□ 0.93
TSKU-201ENST00000333090 DHPSP49366 369 aaPredicted RBP20.88■□□□□ 0.93
TSKU-201ENST00000333090 BIDP55957 195 aa20.88■□□□□ 0.93
TSKU-201ENST00000333090 C15orf54Q8N8G6 183 aa20.88■□□□□ 0.93
TSKU-201ENST00000333090 OR8U1Q8NH10 309 aa20.88■□□□□ 0.93
TSKU-201ENST00000333090 SECTM1Q8WVN6 248 aa20.88■□□□□ 0.93
TSKU-201ENST00000333090 FAM71F1Q96KD3 344 aaPredicted RBP20.88■□□□□ 0.93
TSKU-201ENST00000333090 EHFQ9NZC4 300 aa20.88■□□□□ 0.93
TSKU-201ENST00000333090 TAAR5O14804 337 aa20.88■□□□□ 0.93
TSKU-201ENST00000333090 S100A9P06702 114 aaKnown RBP20.88■□□□□ 0.93
TSKU-201ENST00000333090 CSNK2A1P68400 391 aaPredicted RBP20.88■□□□□ 0.93
TSKU-201ENST00000333090 EIF2S3LQ2VIR3 472 aaKnown RBP20.88■□□□□ 0.93
TSKU-201ENST00000333090 CSNK2A3Q8NEV1 391 aa20.88■□□□□ 0.93
TSKU-201ENST00000333090 DAZLQ92904 295 aaKnown RBP20.88■□□□□ 0.93
TSKU-201ENST00000333090 PLA2G2EQ9NZK7 142 aa20.88■□□□□ 0.93
TSKU-201ENST00000333090 VDAC3Q9Y277 283 aa20.88■□□□□ 0.93
TSKU-201ENST00000333090 TO15178 435 aa20.87■□□□□ 0.93
TSKU-201ENST00000333090 DVL1P1P54792 670 aaPredicted RBP20.87■□□□□ 0.93
TSKU-201ENST00000333090 IL15RAQ13261 267 aa20.87■□□□□ 0.93
TSKU-201ENST00000333090 C16orf47Q6ZP98 133 aaPredicted RBP20.87■□□□□ 0.93
TSKU-201ENST00000333090 HIST1H2BAQ96A08 127 aa20.87■□□□□ 0.93
TSKU-201ENST00000333090 OCSTAMPQ9BR26 566 aa20.87■□□□□ 0.93
TSKU-201ENST00000333090 NAA11Q9BSU3 229 aaPredicted RBP20.87■□□□□ 0.93
TSKU-201ENST00000333090 SMIM3Q9BZL3 60 aa20.87■□□□□ 0.93
TSKU-201ENST00000333090 CACFD1Q9UGQ2 172 aa20.87■□□□□ 0.93
TSKU-201ENST00000333090 PCDH15Q96QU1 1955 aa20.87■□□□□ 0.93
TSKU-201ENST00000333090 PMS2P1A4D2B8 440 aa20.87■□□□□ 0.93
TSKU-201ENST00000333090 H3BML4 177 aa20.87■□□□□ 0.93
TSKU-201ENST00000333090 SNU13P55769 128 aaKnown RBP20.87■□□□□ 0.93
TSKU-201ENST00000333090 CHCHD2P9Q5T1J5 151 aaPredicted RBP20.87■□□□□ 0.93
TSKU-201ENST00000333090 C5orf46Q6UWT4 87 aa20.87■□□□□ 0.93
TSKU-201ENST00000333090 Q6ZS52 159 aa20.87■□□□□ 0.93
TSKU-201ENST00000333090 LHFPL1Q86WI0 220 aa20.87■□□□□ 0.93
TSKU-201ENST00000333090 OR56B1Q8NGI3 324 aa20.87■□□□□ 0.93
TSKU-201ENST00000333090 RLN3Q8WXF3 142 aa20.87■□□□□ 0.93
TSKU-201ENST00000333090 MEMO1Q9Y316 297 aa20.87■□□□□ 0.93
TSKU-201ENST00000333090 FAM157AC9JC47 383 aa20.86■□□□□ 0.93
TSKU-201ENST00000333090 ZNF44P15621 663 aa20.86■□□□□ 0.93
TSKU-201ENST00000333090 RPS2P15880 293 aaKnown RBP20.86■□□□□ 0.93
TSKU-201ENST00000333090 TGIF1Q15583 401 aa20.86■□□□□ 0.93
TSKU-201ENST00000333090 TMEM234Q8WY98 164 aa20.86■□□□□ 0.93
TSKU-201ENST00000333090 PARP11Q9NR21 331 aa20.86■□□□□ 0.93
TSKU-201ENST00000333090 OSGIN2Q9Y236 505 aa20.86■□□□□ 0.93
TSKU-201ENST00000333090 CST4P01036 141 aa20.86■□□□□ 0.93
TSKU-201ENST00000333090 FABP1P07148 127 aa20.86■□□□□ 0.93
TSKU-201ENST00000333090 GIMD1P0DJR0 217 aa20.86■□□□□ 0.93
TSKU-201ENST00000333090 ANOS1P23352 680 aa20.86■□□□□ 0.93
TSKU-201ENST00000333090 RPL12P30050 165 aaKnown RBP20.86■□□□□ 0.93
TSKU-201ENST00000333090 BLKP51451 505 aa20.86■□□□□ 0.93
TSKU-201ENST00000333090 ZP4Q12836 540 aa20.86■□□□□ 0.93
TSKU-201ENST00000333090 IAH1Q2TAA2 248 aaPredicted RBP20.86■□□□□ 0.93
TSKU-201ENST00000333090 OR5D18Q8NGL1 313 aa20.86■□□□□ 0.93
TSKU-201ENST00000333090 MRPL38Q96DV4 380 aaKnown RBP20.86■□□□□ 0.93
TSKU-201ENST00000333090 GPR84Q9NQS5 396 aa20.86■□□□□ 0.93
TSKU-201ENST00000333090 ASH2LQ9UBL3 628 aa20.86■□□□□ 0.93
TSKU-201ENST00000333090 CYP8B1Q9UNU6 501 aa20.86■□□□□ 0.93
TSKU-201ENST00000333090 C5orf52A6NGY3 159 aa20.85■□□□□ 0.93
TSKU-201ENST00000333090 K7EPK0 472 aa20.85■□□□□ 0.93
TSKU-201ENST00000333090 SMIM6P0DI80 62 aa20.85■□□□□ 0.93
TSKU-201ENST00000333090 ZNF708P17019 499 aa20.85■□□□□ 0.93
TSKU-201ENST00000333090 FAM71E2Q8N5Q1 922 aa20.85■□□□□ 0.93
TSKU-201ENST00000333090 DUSP15Q9H1R2 295 aaPredicted RBP20.85■□□□□ 0.93
TSKU-201ENST00000333090 CHST11Q9NPF2 352 aa20.85■□□□□ 0.93
TSKU-201ENST00000333090 FBXL17Q9UF56 701 aa20.85■□□□□ 0.93
TSKU-201ENST00000333090 TMEM268Q5VZI3 342 aa20.85■□□□□ 0.93
TSKU-201ENST00000333090 OR1N1Q8NGS0 311 aa20.85■□□□□ 0.93
TSKU-201ENST00000333090 MFSD8Q8NHS3 518 aa20.85■□□□□ 0.93
TSKU-201ENST00000333090 CD207Q9UJ71 328 aa20.85■□□□□ 0.93
TSKU-201ENST00000333090 B3GALT5Q9Y2C3 310 aa20.85■□□□□ 0.93
TSKU-201ENST00000333090 FRYLO94915 3013 aa20.85■□□□□ 0.93
TSKU-201ENST00000333090 RTTNQ86VV8 2226 aa20.85■□□□□ 0.93
TSKU-201ENST00000333090 SHISA8B8ZZ34 492 aa20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms