RNA–Protein interactions for RNA: ENST00000330045.11

BRCC3-201, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,496 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-201ENST00000330045 SFT2D2O95562 160 aa13.55□□□□□ -0.24
BRCC3-201ENST00000330045 TDGF1P13385 188 aa13.55□□□□□ -0.24
BRCC3-201ENST00000330045 FAM189A2Q15884 450 aa13.55□□□□□ -0.24
BRCC3-201ENST00000330045 PNLIPRP3Q17RR3 467 aa13.55□□□□□ -0.24
BRCC3-201ENST00000330045 FAM74A3Q4VXF1 159 aa13.55□□□□□ -0.24
BRCC3-201ENST00000330045 FAM57BQ71RH2 274 aa13.55□□□□□ -0.24
BRCC3-201ENST00000330045 CLRN3Q8NCR9 226 aa13.55□□□□□ -0.24
BRCC3-201ENST00000330045 TMEM230Q96A57 120 aa13.55□□□□□ -0.24
BRCC3-201ENST00000330045 ARHGAP5-AS1Q96IT6 56 aa13.55□□□□□ -0.24
BRCC3-201ENST00000330045 CDC6Q99741 560 aa13.55□□□□□ -0.24
BRCC3-201ENST00000330045 OCSTAMPQ9BR26 566 aa13.55□□□□□ -0.24
BRCC3-201ENST00000330045 URM1Q9BTM9 101 aaKnown RBP13.55□□□□□ -0.24
BRCC3-201ENST00000330045 PNRC2Q9NPJ4 139 aaKnown RBP13.55□□□□□ -0.24
BRCC3-201ENST00000330045 MYOTQ9UBF9 498 aa13.55□□□□□ -0.24
BRCC3-201ENST00000330045 RALGAPA1Q6GYQ0 2036 aa13.55□□□□□ -0.24
BRCC3-201ENST00000330045 QDPRP09417 244 aa13.55□□□□□ -0.24
BRCC3-201ENST00000330045 ZNF43P17038 809 aa13.55□□□□□ -0.24
BRCC3-201ENST00000330045 CCL1P22362 96 aa13.55□□□□□ -0.24
BRCC3-201ENST00000330045 ARFRP1Q13795 201 aa13.55□□□□□ -0.24
BRCC3-201ENST00000330045 SLC9A3R2Q15599 337 aa13.55□□□□□ -0.24
BRCC3-201ENST00000330045 PDSS1Q5T2R2 415 aa13.55□□□□□ -0.24
BRCC3-201ENST00000330045 CLEC18BQ6UXF7 455 aa13.55□□□□□ -0.24
BRCC3-201ENST00000330045 TMPPEQ6ZT21 453 aa13.55□□□□□ -0.24
BRCC3-201ENST00000330045 DOK3Q7L591 496 aa13.55□□□□□ -0.24
BRCC3-201ENST00000330045 BAP18Q8IXM2 172 aa13.55□□□□□ -0.24
BRCC3-201ENST00000330045 ZNF283Q8N7M2 679 aa13.55□□□□□ -0.24
BRCC3-201ENST00000330045 OR5H2Q8NGV7 314 aa13.55□□□□□ -0.24
BRCC3-201ENST00000330045 OXGR1Q96P68 337 aa13.55□□□□□ -0.24
BRCC3-201ENST00000330045 FREM2Q5SZK8 3169 aa13.55□□□□□ -0.24
BRCC3-201ENST00000330045 MFNGO00587 321 aa13.54□□□□□ -0.24
BRCC3-201ENST00000330045 OR2J2O76002 312 aa13.54□□□□□ -0.24
BRCC3-201ENST00000330045 ZFAND5O76080 213 aa13.54□□□□□ -0.24
BRCC3-201ENST00000330045 ATG12O94817 140 aa13.54□□□□□ -0.24
BRCC3-201ENST00000330045 NAAAQ02083 359 aa13.54□□□□□ -0.24
BRCC3-201ENST00000330045 ACY1Q03154 408 aa13.54□□□□□ -0.24
BRCC3-201ENST00000330045 SGCAQ16586 387 aa13.54□□□□□ -0.24
BRCC3-201ENST00000330045 TMEM71Q6P5X7 295 aa13.54□□□□□ -0.24
BRCC3-201ENST00000330045 ZNF574Q6ZN55 896 aaPredicted RBP13.54□□□□□ -0.24
BRCC3-201ENST00000330045 ZSCAN4Q8NAM6 433 aaPredicted RBP13.54□□□□□ -0.24
BRCC3-201ENST00000330045 SLC30A7Q8NEW0 376 aa13.54□□□□□ -0.24
BRCC3-201ENST00000330045 RRNAD1Q96FB5 475 aaKnown RBP13.54□□□□□ -0.24
BRCC3-201ENST00000330045 CYYR1Q96J86 154 aa13.54□□□□□ -0.24
BRCC3-201ENST00000330045 SCGB3A2Q96PL1 93 aa13.54□□□□□ -0.24
BRCC3-201ENST00000330045 OR6C1Q96RD1 312 aa13.54□□□□□ -0.24
BRCC3-201ENST00000330045 SLC6A15Q9H2J7 730 aa13.54□□□□□ -0.24
BRCC3-201ENST00000330045 RAB18Q9NP72 206 aa13.54□□□□□ -0.24
BRCC3-201ENST00000330045 SLC39A1Q9NY26 324 aa13.54□□□□□ -0.24
BRCC3-201ENST00000330045 FLVCR1Q9Y5Y0 555 aa13.54□□□□□ -0.24
BRCC3-201ENST00000330045 TMEM218A2RU14 115 aa13.54□□□□□ -0.24
BRCC3-201ENST00000330045 ZNF726A6NNF4 738 aa13.54□□□□□ -0.24
BRCC3-201ENST00000330045 H0YIZ8 118 aa13.54□□□□□ -0.24
BRCC3-201ENST00000330045 ADAP1O75689 374 aa13.54□□□□□ -0.24
BRCC3-201ENST00000330045 ICAM2P13598 275 aa13.54□□□□□ -0.24
BRCC3-201ENST00000330045 PI3P19957 117 aa13.54□□□□□ -0.24
BRCC3-201ENST00000330045 SFTPDP35247 375 aa13.54□□□□□ -0.24
BRCC3-201ENST00000330045 CBX5P45973 191 aa13.54□□□□□ -0.24
BRCC3-201ENST00000330045 AIMP2Q13155 320 aaKnown RBP13.54□□□□□ -0.24
BRCC3-201ENST00000330045 KCNMB1Q16558 191 aa13.54□□□□□ -0.24
BRCC3-201ENST00000330045 PMS2CLQ68D20 193 aa13.54□□□□□ -0.24
BRCC3-201ENST00000330045 CPEB2Q7Z5Q1 589 aaKnown RBP13.54□□□□□ -0.24
BRCC3-201ENST00000330045 OR2M3Q8NG83 312 aa13.54□□□□□ -0.24
BRCC3-201ENST00000330045 PAQR8Q8TEZ7 354 aa13.54□□□□□ -0.24
BRCC3-201ENST00000330045 ROBO4Q8WZ75 1007 aa13.54□□□□□ -0.24
BRCC3-201ENST00000330045 ZNF416Q9BWM5 594 aa13.54□□□□□ -0.24
BRCC3-201ENST00000330045 PCDHB16Q9NRJ7 776 aa13.54□□□□□ -0.24
BRCC3-201ENST00000330045 GPR179Q6PRD1 2367 aa13.53□□□□□ -0.24
BRCC3-201ENST00000330045 A0A0B4J2A0 478 aa13.53□□□□□ -0.24
BRCC3-201ENST00000330045 IGKV1-9A0A0C4DH69 117 aa13.53□□□□□ -0.24
BRCC3-201ENST00000330045 RAMP1O60894 148 aa13.53□□□□□ -0.24
BRCC3-201ENST00000330045 SCRG1O75711 98 aa13.53□□□□□ -0.24
BRCC3-201ENST00000330045 AMY2BP19961 511 aa13.53□□□□□ -0.24
BRCC3-201ENST00000330045 IL32P24001 234 aa13.53□□□□□ -0.24
BRCC3-201ENST00000330045 FPR2P25090 351 aa13.53□□□□□ -0.24
BRCC3-201ENST00000330045 DCDP81605 110 aaKnown RBP13.53□□□□□ -0.24
BRCC3-201ENST00000330045 HIST3H3Q16695 136 aa13.53□□□□□ -0.24
BRCC3-201ENST00000330045 CCDC157Q569K6 752 aa13.53□□□□□ -0.24
BRCC3-201ENST00000330045 SSC4DQ8WTU2 575 aa13.53□□□□□ -0.24
BRCC3-201ENST00000330045 RNF141Q8WVD5 230 aa13.53□□□□□ -0.24
BRCC3-201ENST00000330045 ST6GALNAC5Q9BVH7 336 aa13.53□□□□□ -0.24
BRCC3-201ENST00000330045 OR10A2Q9H208 303 aa13.53□□□□□ -0.24
BRCC3-201ENST00000330045 CYTL1Q9NRR1 136 aa13.53□□□□□ -0.24
BRCC3-201ENST00000330045 SHPKQ9UHJ6 478 aa13.53□□□□□ -0.24
BRCC3-201ENST00000330045 TTC28Q96AY4 2481 aa13.53□□□□□ -0.24
BRCC3-201ENST00000330045 TOX3O15405 576 aaPredicted RBP13.53□□□□□ -0.24
BRCC3-201ENST00000330045 OR3A2P47893 321 aa13.53□□□□□ -0.24
BRCC3-201ENST00000330045 AKR1C2P52895 323 aa13.53□□□□□ -0.24
BRCC3-201ENST00000330045 GRB2P62993 217 aaKnown RBP13.53□□□□□ -0.24
BRCC3-201ENST00000330045 AKR1C1Q04828 323 aa13.53□□□□□ -0.24
BRCC3-201ENST00000330045 LPAL2Q16609 132 aa13.53□□□□□ -0.24
BRCC3-201ENST00000330045 TMEM176BQ3YBM2 270 aaPredicted RBP13.53□□□□□ -0.24
BRCC3-201ENST00000330045 DMRTC1Q5HYR2 192 aa13.53□□□□□ -0.24
BRCC3-201ENST00000330045 PEG10Q86TG7 708 aaKnown RBP13.53□□□□□ -0.24
BRCC3-201ENST00000330045 OR51T1Q8NGJ9 327 aa13.53□□□□□ -0.24
BRCC3-201ENST00000330045 OR14K1Q8NGZ2 314 aa13.53□□□□□ -0.24
BRCC3-201ENST00000330045 TSNAXQ99598 290 aaKnown RBP13.53□□□□□ -0.24
BRCC3-201ENST00000330045 RTBDNQ9BSG5 229 aaPredicted RBP13.53□□□□□ -0.24
BRCC3-201ENST00000330045 TMEM100Q9NV29 134 aa13.53□□□□□ -0.24
BRCC3-201ENST00000330045 PRR13Q9NZ81 148 aa13.53□□□□□ -0.24
BRCC3-201ENST00000330045 B3GALT1Q9Y5Z6 326 aa13.53□□□□□ -0.24
BRCC3-201ENST00000330045 ABCD4O14678 606 aa13.52□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms