RNA–Protein interactions for RNA: ENST00000329231.8

ATPAF1-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-201ENST00000329231 MMP26Q9NRE1 261 aa23.11■■□□□ 1.29
ATPAF1-201ENST00000329231 IKZF2Q9UKS7 526 aa23.11■■□□□ 1.29
ATPAF1-201ENST00000329231 ANKRD65E5RJM6 399 aa23.1■■□□□ 1.29
ATPAF1-201ENST00000329231 TRAPPC2LH3BP13 241 aa23.1■■□□□ 1.29
ATPAF1-201ENST00000329231 RIDAP52758 137 aaKnown RBP23.1■■□□□ 1.29
ATPAF1-201ENST00000329231 GNB2P62879 340 aa23.1■■□□□ 1.29
ATPAF1-201ENST00000329231 IL5RAQ01344 420 aa23.1■■□□□ 1.29
ATPAF1-201ENST00000329231 ZNF829Q3KNS6 432 aaPredicted RBP23.1■■□□□ 1.29
ATPAF1-201ENST00000329231 BOLLQ8N9W6 283 aaKnown RBP23.1■■□□□ 1.29
ATPAF1-201ENST00000329231 DEFB108BQ8NET1 73 aa23.1■■□□□ 1.29
ATPAF1-201ENST00000329231 EME1Q96AY2 570 aa23.1■■□□□ 1.29
ATPAF1-201ENST00000329231 LYZL4Q96KX0 146 aa23.1■■□□□ 1.29
ATPAF1-201ENST00000329231 ABCB9Q9NP78 766 aa23.1■■□□□ 1.29
ATPAF1-201ENST00000329231 TRIM36Q9NQ86 728 aa23.1■■□□□ 1.29
ATPAF1-201ENST00000329231 FAM206AQ9NX38 181 aa23.1■■□□□ 1.29
ATPAF1-201ENST00000329231 WARS2Q9UGM6 360 aaKnown RBP23.1■■□□□ 1.29
ATPAF1-201ENST00000329231 OPN4Q9UHM6 478 aa23.1■■□□□ 1.29
ATPAF1-201ENST00000329231 MPC1Q9Y5U8 109 aa23.1■■□□□ 1.29
ATPAF1-201ENST00000329231 ARHGAP32A7KAX9 2087 aa23.1■■□□□ 1.29
ATPAF1-201ENST00000329231 A0A0U1RQV5 110 aa23.09■■□□□ 1.29
ATPAF1-201ENST00000329231 hCG_1807616A0A1W2PRN6 198 aa23.09■■□□□ 1.29
ATPAF1-201ENST00000329231 ANXA2P2A6NMY6 339 aa23.09■■□□□ 1.29
ATPAF1-201ENST00000329231 LGALS8O00214 317 aa23.09■■□□□ 1.29
ATPAF1-201ENST00000329231 ZNF12P17014 697 aa23.09■■□□□ 1.29
ATPAF1-201ENST00000329231 CXCR4P61073 352 aa23.09■■□□□ 1.29
ATPAF1-201ENST00000329231 ZNF154Q13106 437 aa23.09■■□□□ 1.29
ATPAF1-201ENST00000329231 ZNF322Q6U7Q0 402 aaPredicted RBP23.09■■□□□ 1.29
ATPAF1-201ENST00000329231 ZBTB49Q6ZSB9 765 aa23.09■■□□□ 1.29
ATPAF1-201ENST00000329231 C19orf18Q8NEA5 215 aa23.09■■□□□ 1.29
ATPAF1-201ENST00000329231 OR8J1Q8NGP2 316 aa23.09■■□□□ 1.29
ATPAF1-201ENST00000329231 ITFG2Q969R8 447 aa23.09■■□□□ 1.29
ATPAF1-201ENST00000329231 MICU1Q9BPX6 476 aa23.09■■□□□ 1.29
ATPAF1-201ENST00000329231 TTTY10Q9BZA0 68 aa23.09■■□□□ 1.29
ATPAF1-201ENST00000329231 CLN6Q9NWW5 311 aa23.09■■□□□ 1.29
ATPAF1-201ENST00000329231 INSIG2Q9Y5U4 225 aa23.09■■□□□ 1.29
ATPAF1-201ENST00000329231 MXRA5Q9NR99 2828 aa23.09■■□□□ 1.29
ATPAF1-201ENST00000329231 PRR32B1ATL7 298 aa23.08■■□□□ 1.29
ATPAF1-201ENST00000329231 ZNF670-ZNF695F2Z2N8 137 aa23.08■■□□□ 1.29
ATPAF1-201ENST00000329231 CST4P01036 141 aa23.08■■□□□ 1.29
ATPAF1-201ENST00000329231 ADRA2CP18825 462 aa23.08■■□□□ 1.29
ATPAF1-201ENST00000329231 EPHA1P21709 976 aa23.08■■□□□ 1.29
ATPAF1-201ENST00000329231 ACKR3P25106 362 aa23.08■■□□□ 1.29
ATPAF1-201ENST00000329231 PITPNBP48739 271 aa23.08■■□□□ 1.29
ATPAF1-201ENST00000329231 CDC42P60953 191 aa23.08■■□□□ 1.29
ATPAF1-201ENST00000329231 ZNF826PQ6ZT77 177 aa23.08■■□□□ 1.29
ATPAF1-201ENST00000329231 OR1M1Q8NGA1 313 aa23.08■■□□□ 1.29
ATPAF1-201ENST00000329231 FAM81AQ8TBF8 368 aa23.08■■□□□ 1.29
ATPAF1-201ENST00000329231 SLC29A1Q99808 456 aa23.08■■□□□ 1.29
ATPAF1-201ENST00000329231 PBOV1Q9GZY1 135 aa23.08■■□□□ 1.29
ATPAF1-201ENST00000329231 TRAV38-1A0A0B4J264 116 aa23.07■■□□□ 1.28
ATPAF1-201ENST00000329231 HTR1FP30939 366 aa23.07■■□□□ 1.28
ATPAF1-201ENST00000329231 POU4F2Q12837 409 aa23.07■■□□□ 1.28
ATPAF1-201ENST00000329231 KRTAP24-1Q3LI83 254 aa23.07■■□□□ 1.28
ATPAF1-201ENST00000329231 ZIK1Q3SY52 487 aaPredicted RBP23.07■■□□□ 1.28
ATPAF1-201ENST00000329231 SFRP4Q6FHJ7 346 aaPredicted RBP23.07■■□□□ 1.28
ATPAF1-201ENST00000329231 PHC2Q8IXK0 858 aa23.07■■□□□ 1.28
ATPAF1-201ENST00000329231 GALNT4Q8N4A0 578 aa23.07■■□□□ 1.28
ATPAF1-201ENST00000329231 OR51G2Q8NGK0 314 aa23.07■■□□□ 1.28
ATPAF1-201ENST00000329231 ITPKCQ96DU7 683 aa23.07■■□□□ 1.28
ATPAF1-201ENST00000329231 HRASLS5Q96KN8 279 aa23.07■■□□□ 1.28
ATPAF1-201ENST00000329231 MRI1Q9BV20 369 aa23.07■■□□□ 1.28
ATPAF1-201ENST00000329231 RTL8AQ9BWD3 113 aa23.07■■□□□ 1.28
ATPAF1-201ENST00000329231 RNPEPL1Q9HAU8 725 aa23.07■■□□□ 1.28
ATPAF1-201ENST00000329231 CLN8Q9UBY8 286 aa23.07■■□□□ 1.28
ATPAF1-201ENST00000329231 AUP1Q9Y679 476 aa23.07■■□□□ 1.28
ATPAF1-201ENST00000329231 A0A0A6YYJ9 748 aa23.06■■□□□ 1.28
ATPAF1-201ENST00000329231 OOEPA6NGQ2 149 aa23.06■■□□□ 1.28
ATPAF1-201ENST00000329231 C3orf80F5H4A9 247 aa23.06■■□□□ 1.28
ATPAF1-201ENST00000329231 NDUFA2O43678 99 aa23.06■■□□□ 1.28
ATPAF1-201ENST00000329231 CD80P33681 288 aa23.06■■□□□ 1.28
ATPAF1-201ENST00000329231 MAP2K3P46734 347 aa23.06■■□□□ 1.28
ATPAF1-201ENST00000329231 SRSF2Q01130 221 aaKnown RBP23.06■■□□□ 1.28
ATPAF1-201ENST00000329231 EGR3Q06889 387 aa23.06■■□□□ 1.28
ATPAF1-201ENST00000329231 PRDX4Q13162 271 aa23.06■■□□□ 1.28
ATPAF1-201ENST00000329231 LYPD2Q6UXB3 125 aa23.06■■□□□ 1.28
ATPAF1-201ENST00000329231 WDR86Q86TI4 376 aa23.06■■□□□ 1.28
ATPAF1-201ENST00000329231 COMMD2Q86X83 199 aa23.06■■□□□ 1.28
ATPAF1-201ENST00000329231 APOL4Q9BPW4 351 aa23.06■■□□□ 1.28
ATPAF1-201ENST00000329231 PPP1R3EQ9H7J1 279 aa23.06■■□□□ 1.28
ATPAF1-201ENST00000329231 NUFIP1Q9UHK0 495 aaKnown RBP23.06■■□□□ 1.28
ATPAF1-201ENST00000329231 ZNF850A8MQ14 1090 aa23.05■■□□□ 1.28
ATPAF1-201ENST00000329231 E9PQ18 207 aa23.05■■□□□ 1.28
ATPAF1-201ENST00000329231 LHBP01229 141 aa23.05■■□□□ 1.28
ATPAF1-201ENST00000329231 ATP6V1B1P15313 513 aa23.05■■□□□ 1.28
ATPAF1-201ENST00000329231 PSMB10P40306 273 aa23.05■■□□□ 1.28
ATPAF1-201ENST00000329231 HOXA4Q00056 320 aaPredicted RBP23.05■■□□□ 1.28
ATPAF1-201ENST00000329231 TMED1Q13445 227 aa23.05■■□□□ 1.28
ATPAF1-201ENST00000329231 BTNL3Q6UXE8 466 aa23.05■■□□□ 1.28
ATPAF1-201ENST00000329231 C11orf53Q8IXP5 236 aa23.05■■□□□ 1.28
ATPAF1-201ENST00000329231 GCSAMQ8N6F7 178 aa23.05■■□□□ 1.28
ATPAF1-201ENST00000329231 ZNF418Q8TF45 676 aaPredicted RBP23.05■■□□□ 1.28
ATPAF1-201ENST00000329231 TRUB1Q8WWH5 349 aaKnown RBP23.05■■□□□ 1.28
ATPAF1-201ENST00000329231 PIGCQ92535 297 aa23.05■■□□□ 1.28
ATPAF1-201ENST00000329231 RFKQ969G6 155 aa23.05■■□□□ 1.28
ATPAF1-201ENST00000329231 MBOAT4Q96T53 435 aa23.05■■□□□ 1.28
ATPAF1-201ENST00000329231 IMPAD1Q9NX62 359 aa23.05■■□□□ 1.28
ATPAF1-201ENST00000329231 NPY4RP50391 375 aa23.04■■□□□ 1.28
ATPAF1-201ENST00000329231 RCN1Q15293 331 aa23.04■■□□□ 1.28
ATPAF1-201ENST00000329231 WDR25Q64LD2 544 aaPredicted RBP23.04■■□□□ 1.28
ATPAF1-201ENST00000329231 ZDHHC23Q8IYP9 409 aa23.04■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms