RNA–Protein interactions for RNA: ENST00000324771.12

DDR1-223, Transcript of discoidin domain receptor tyrosine kinase 1, human

APPRIS ALT2 TSL 5 BASIC

Gene DDR1, Length 4,148 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-223	ENST00000324771	TRIP6	Q15654	476 aa	Known RBP	10.52	□□□□□ -0.73
DDR1-223	ENST00000324771	IAH1	Q2TAA2	248 aa	Predicted RBP	10.52	□□□□□ -0.73
DDR1-223	ENST00000324771	NHLRC1	Q6VVB1	395 aa		10.52	□□□□□ -0.73
DDR1-223	ENST00000324771	SLC26A10	Q8NG04	563 aa		10.52	□□□□□ -0.73
DDR1-223	ENST00000324771	OR4D6	Q8NGJ1	314 aa		10.52	□□□□□ -0.73
DDR1-223	ENST00000324771	OR51H1	Q8NH63	302 aa		10.52	□□□□□ -0.73
DDR1-223	ENST00000324771	PRR13	Q9NZ81	148 aa		10.52	□□□□□ -0.73
DDR1-223	ENST00000324771	ST6GALNAC2	Q9UJ37	374 aa		10.52	□□□□□ -0.73
DDR1-223	ENST00000324771	HTT	P42858	3142 aa		10.51	□□□□□ -0.73
DDR1-223	ENST00000324771	PLSCR5	A0PG75	271 aa		10.51	□□□□□ -0.73
DDR1-223	ENST00000324771	CDK2AP1	O14519	115 aa		10.51	□□□□□ -0.73
DDR1-223	ENST00000324771	TIMM8A	O60220	97 aa	Predicted RBP	10.51	□□□□□ -0.73
DDR1-223	ENST00000324771	ZNF354A	O60765	605 aa	Predicted RBP	10.51	□□□□□ -0.73
DDR1-223	ENST00000324771	C1QB	P02746	253 aa		10.51	□□□□□ -0.73
DDR1-223	ENST00000324771	ATP1A1-AS1	Q5TC04	95 aa		10.51	□□□□□ -0.73
DDR1-223	ENST00000324771	CD276	Q5ZPR3	534 aa		10.51	□□□□□ -0.73
DDR1-223	ENST00000324771	FBXL14	Q8N1E6	418 aa		10.51	□□□□□ -0.73
DDR1-223	ENST00000324771	ARHGAP5-AS1	Q96IT6	56 aa		10.51	□□□□□ -0.73
DDR1-223	ENST00000324771	ZNF286A	Q9HBT8	521 aa		10.51	□□□□□ -0.73
DDR1-223	ENST00000324771	RAMP1	O60894	148 aa		10.51	□□□□□ -0.73
DDR1-223	ENST00000324771	HPX	P02790	462 aa		10.51	□□□□□ -0.73
DDR1-223	ENST00000324771	PET100	P0DJ07	73 aa		10.51	□□□□□ -0.73
DDR1-223	ENST00000324771	RAB1A	P62820	205 aa		10.51	□□□□□ -0.73
DDR1-223	ENST00000324771	CEBPE	Q15744	281 aa		10.51	□□□□□ -0.73
DDR1-223	ENST00000324771	ALKBH6	Q3KRA9	238 aa		10.51	□□□□□ -0.73
DDR1-223	ENST00000324771	CDC20B	Q86Y33	519 aa		10.51	□□□□□ -0.73
DDR1-223	ENST00000324771	STOML3	Q8TAV4	291 aa		10.51	□□□□□ -0.73
DDR1-223	ENST00000324771	WDR89	Q96FK6	387 aa	Predicted RBP	10.51	□□□□□ -0.73
DDR1-223	ENST00000324771	PIEZO2	Q9H5I5	2752 aa		10.51	□□□□□ -0.73
DDR1-223	ENST00000324771	EXOSC5	Q9NQT4	235 aa	Known RBP eCLIP	10.51	□□□□□ -0.73
DDR1-223	ENST00000324771	PLXNA3	P51805	1871 aa		10.51	□□□□□ -0.73
DDR1-223	ENST00000324771		A0A1W2PP11	408 aa		10.51	□□□□□ -0.73
DDR1-223	ENST00000324771	PHF1	O43189	567 aa	Predicted RBP	10.51	□□□□□ -0.73
DDR1-223	ENST00000324771	CTAG2	O75638	210 aa		10.51	□□□□□ -0.73
DDR1-223	ENST00000324771	GLS	O94925	669 aa	Predicted RBP	10.51	□□□□□ -0.73
DDR1-223	ENST00000324771	CHRM2	P08172	466 aa		10.51	□□□□□ -0.73
DDR1-223	ENST00000324771	IL2RG	P31785	369 aa		10.51	□□□□□ -0.73
DDR1-223	ENST00000324771	MAGEA5	P43359	124 aa		10.51	□□□□□ -0.73
DDR1-223	ENST00000324771	GK2	Q14410	553 aa	Predicted RBP	10.51	□□□□□ -0.73
DDR1-223	ENST00000324771	SP6	Q3SY56	376 aa		10.51	□□□□□ -0.73
DDR1-223	ENST00000324771	CMTM1	Q8IZ96	169 aa		10.51	□□□□□ -0.73
DDR1-223	ENST00000324771	OR1J2	Q8NGS2	313 aa		10.51	□□□□□ -0.73
DDR1-223	ENST00000324771	ASB10	Q8WXI3	467 aa		10.51	□□□□□ -0.73
DDR1-223	ENST00000324771	NPAS1	Q99742	590 aa		10.51	□□□□□ -0.73
DDR1-223	ENST00000324771	VRK1	Q99986	396 aa	Predicted RBP	10.51	□□□□□ -0.73
DDR1-223	ENST00000324771	ZNF2	Q9BSG1	426 aa	Predicted RBP	10.51	□□□□□ -0.73
DDR1-223	ENST00000324771	UCK1	Q9HA47	277 aa		10.51	□□□□□ -0.73
DDR1-223	ENST00000324771	PILRB	Q9UKJ0	227 aa		10.51	□□□□□ -0.73
DDR1-223	ENST00000324771	FZR1	Q9UM11	496 aa		10.51	□□□□□ -0.73
DDR1-223	ENST00000324771	HS3ST3B1	Q9Y662	390 aa		10.51	□□□□□ -0.73
DDR1-223	ENST00000324771		A0A0J9YW62	118 aa		10.5	□□□□□ -0.73
DDR1-223	ENST00000324771	RAB27B	O00194	218 aa		10.5	□□□□□ -0.73
DDR1-223	ENST00000324771	KLK10	O43240	276 aa		10.5	□□□□□ -0.73
DDR1-223	ENST00000324771	KISS1	Q15726	138 aa		10.5	□□□□□ -0.73
DDR1-223	ENST00000324771	FAM74A1	Q5RGS3	127 aa		10.5	□□□□□ -0.73
DDR1-223	ENST00000324771	NAA40	Q86UY6	237 aa		10.5	□□□□□ -0.73
DDR1-223	ENST00000324771	OR8B12	Q8NGG6	310 aa		10.5	□□□□□ -0.73
DDR1-223	ENST00000324771	ST8SIA4	Q92187	359 aa		10.5	□□□□□ -0.73
DDR1-223	ENST00000324771	SPSB2	Q99619	263 aa		10.5	□□□□□ -0.73
DDR1-223	ENST00000324771	HES7	Q9BYE0	225 aa		10.5	□□□□□ -0.73
DDR1-223	ENST00000324771	ESRP2	Q9H6T0	727 aa	Known RBP	10.5	□□□□□ -0.73
DDR1-223	ENST00000324771	ST3GAL6	Q9Y274	331 aa		10.5	□□□□□ -0.73
DDR1-223	ENST00000324771	SF3B6	Q9Y3B4	125 aa	Known RBP	10.5	□□□□□ -0.73
DDR1-223	ENST00000324771	KIR2DP1	A0A0G2JNF4	349 aa	Predicted RBP	10.5	□□□□□ -0.73
DDR1-223	ENST00000324771	OR4E1	P0C645	316 aa		10.5	□□□□□ -0.73
DDR1-223	ENST00000324771	ZXDA	P98168	799 aa		10.5	□□□□□ -0.73
DDR1-223	ENST00000324771	C19orf57	Q0VDD7	668 aa		10.5	□□□□□ -0.73
DDR1-223	ENST00000324771	C6orf201	Q7Z4U5	140 aa		10.5	□□□□□ -0.73
DDR1-223	ENST00000324771	ZNF687	Q8N1G0	1237 aa		10.5	□□□□□ -0.73
DDR1-223	ENST00000324771	OR2M3	Q8NG83	312 aa		10.5	□□□□□ -0.73
DDR1-223	ENST00000324771	SLC25A21	Q9BQT8	299 aa	Predicted RBP	10.5	□□□□□ -0.73
DDR1-223	ENST00000324771	RSPO3	Q9BXY4	272 aa	Predicted RBP	10.5	□□□□□ -0.73
DDR1-223	ENST00000324771	MRPS18A	Q9NVS2	196 aa	Known RBP	10.5	□□□□□ -0.73
DDR1-223	ENST00000324771	KLF13	Q9Y2Y9	288 aa	Predicted RBP	10.5	□□□□□ -0.73
DDR1-223	ENST00000324771	BORCS7-ASMT	A0A0B4J1R7	106 aa		10.5	□□□□□ -0.73
DDR1-223	ENST00000324771	IGKV3-11	P04433	115 aa		10.5	□□□□□ -0.73
DDR1-223	ENST00000324771	SERPINA7	P05543	415 aa		10.5	□□□□□ -0.73
DDR1-223	ENST00000324771	RAC1	P63000	192 aa		10.5	□□□□□ -0.73
DDR1-223	ENST00000324771	CLINT1	Q14677	625 aa		10.5	□□□□□ -0.73
DDR1-223	ENST00000324771	PABPC1L2A	Q5JQF8	200 aa		10.5	□□□□□ -0.73
DDR1-223	ENST00000324771	OR2B11	Q5JQS5	317 aa		10.5	□□□□□ -0.73
DDR1-223	ENST00000324771	STX12	Q86Y82	276 aa		10.5	□□□□□ -0.73
DDR1-223	ENST00000324771	TMEM217	Q8N7C4	229 aa		10.5	□□□□□ -0.73
DDR1-223	ENST00000324771	OR1S1	Q8NH92	325 aa		10.5	□□□□□ -0.73
DDR1-223	ENST00000324771	GLYATL2	Q8WU03	294 aa		10.5	□□□□□ -0.73
DDR1-223	ENST00000324771	ASB5	Q8WWX0	329 aa		10.5	□□□□□ -0.73
DDR1-223	ENST00000324771	NTM	Q9P121	344 aa		10.5	□□□□□ -0.73
DDR1-223	ENST00000324771	NOTCH2	Q04721	2471 aa		10.49	□□□□□ -0.73
DDR1-223	ENST00000324771	TOX3	O15405	576 aa	Predicted RBP	10.49	□□□□□ -0.73
DDR1-223	ENST00000324771	PIN1P1	O15428	100 aa		10.49	□□□□□ -0.73
DDR1-223	ENST00000324771	PTBP1	P26599	531 aa	Known RBP eCLIP	10.49	□□□□□ -0.73	4e-6	■■■■■ 35.7
DDR1-223	ENST00000324771	RAB2A	P61019	212 aa		10.49	□□□□□ -0.73
DDR1-223	ENST00000324771	HSD17B11	Q8NBQ5	300 aa		10.49	□□□□□ -0.73
DDR1-223	ENST00000324771	OR5T1	Q8NG75	326 aa		10.49	□□□□□ -0.73
DDR1-223	ENST00000324771	OR2AK2	Q8NG84	335 aa		10.49	□□□□□ -0.73
DDR1-223	ENST00000324771	OR10R2	Q8NGX6	335 aa		10.49	□□□□□ -0.73
DDR1-223	ENST00000324771	SUCNR1	Q9BXA5	334 aa		10.49	□□□□□ -0.73
DDR1-223	ENST00000324771	ZNF275	Q9NSD4	429 aa	Predicted RBP	10.49	□□□□□ -0.73
DDR1-223	ENST00000324771	LYZL6	O75951	148 aa		10.49	□□□□□ -0.73
DDR1-223	ENST00000324771	ZNF728	P0DKX0	622 aa		10.49	□□□□□ -0.73

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