RNA–Protein interactions for RNA: ENST00000316707.10

PTPN13-201, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 7,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-201ENST00000316707 BRWD3Q6RI45 1802 aa4.24□□□□□ -1.73
PTPN13-201ENST00000316707 FRG2CA6NGY1 282 aa4.24□□□□□ -1.73
PTPN13-201ENST00000316707 C11orf98E9PRG8 122 aa4.24□□□□□ -1.73
PTPN13-201ENST00000316707 ZNF133P52736 654 aaPredicted RBP4.24□□□□□ -1.73
PTPN13-201ENST00000316707 SNU13P55769 128 aaKnown RBP4.24□□□□□ -1.73
PTPN13-201ENST00000316707 ZP4Q12836 540 aa4.24□□□□□ -1.73
PTPN13-201ENST00000316707 CD226Q15762 336 aa4.24□□□□□ -1.73
PTPN13-201ENST00000316707 ANKRD55Q3KP44 614 aa4.24□□□□□ -1.73
PTPN13-201ENST00000316707 TCEAL5Q5H9L2 206 aa4.24□□□□□ -1.73
PTPN13-201ENST00000316707 PSRC1Q6PGN9 363 aaPredicted RBP4.24□□□□□ -1.73
PTPN13-201ENST00000316707 DPPA3Q6W0C5 159 aa4.24□□□□□ -1.73
PTPN13-201ENST00000316707 OR2AJ1Q8NGZ0 328 aa4.24□□□□□ -1.73
PTPN13-201ENST00000316707 OR10A2Q9H208 303 aa4.24□□□□□ -1.73
PTPN13-201ENST00000316707 CERS4Q9HA82 394 aa4.24□□□□□ -1.73
PTPN13-201ENST00000316707 SUPT4H1P63272 117 aaKnown RBP4.24□□□□□ -1.73
PTPN13-201ENST00000316707 GPM6BQ13491 265 aa4.24□□□□□ -1.73
PTPN13-201ENST00000316707 GGNBP1Q5YKI7 109 aa4.24□□□□□ -1.73
PTPN13-201ENST00000316707 CBLN3Q6UW01 205 aa4.24□□□□□ -1.73
PTPN13-201ENST00000316707 GRASPQ7Z6J2 395 aaPredicted RBP4.24□□□□□ -1.73
PTPN13-201ENST00000316707 YAF2Q8IY57 180 aa4.24□□□□□ -1.73
PTPN13-201ENST00000316707 CCDC71LQ8N9Z2 235 aa4.24□□□□□ -1.73
PTPN13-201ENST00000316707 OR1E3Q8WZA6 343 aa4.24□□□□□ -1.73
PTPN13-201ENST00000316707 ST8SIA1Q92185 356 aa4.24□□□□□ -1.73
PTPN13-201ENST00000316707 ZNF700Q9H0M5 742 aa4.24□□□□□ -1.73
PTPN13-201ENST00000316707 DCAF16Q9NXF7 216 aa4.24□□□□□ -1.73
PTPN13-201ENST00000316707 PITPNC1Q9UKF7 332 aa4.24□□□□□ -1.73
PTPN13-201ENST00000316707 RNF150Q9ULK6 438 aa4.24□□□□□ -1.73
PTPN13-201ENST00000316707 CYP8B1Q9UNU6 501 aa4.24□□□□□ -1.73
PTPN13-201ENST00000316707 COA3Q9Y2R0 106 aaPredicted RBP4.24□□□□□ -1.73
PTPN13-201ENST00000316707 INSL6Q9Y581 213 aa4.24□□□□□ -1.73
PTPN13-201ENST00000316707 A0A087WZY1 265 aa4.24□□□□□ -1.73
PTPN13-201ENST00000316707 TMED7-TICAM2A0A0A6YYA0 188 aa4.24□□□□□ -1.73
PTPN13-201ENST00000316707 PPIHO43447 177 aaKnown RBP4.24□□□□□ -1.73
PTPN13-201ENST00000316707 RPS2P15880 293 aaKnown RBP4.24□□□□□ -1.73
PTPN13-201ENST00000316707 NOGQ13253 232 aa4.24□□□□□ -1.73
PTPN13-201ENST00000316707 NCMAPQ5T1S8 102 aa4.24□□□□□ -1.73
PTPN13-201ENST00000316707 FOXRED2Q8IWF2 684 aa4.24□□□□□ -1.73
PTPN13-201ENST00000316707 OR10D4PQ8NGN7 298 aa4.24□□□□□ -1.73
PTPN13-201ENST00000316707 OR5R1Q8NH85 324 aa4.24□□□□□ -1.73
PTPN13-201ENST00000316707 MR1Q95460 341 aa4.24□□□□□ -1.73
PTPN13-201ENST00000316707 MRGPRFQ96AM1 343 aa4.24□□□□□ -1.73
PTPN13-201ENST00000316707 MUCL1Q96DR8 90 aa4.24□□□□□ -1.73
PTPN13-201ENST00000316707 WDR77Q9BQA1 342 aaPredicted RBP4.24□□□□□ -1.73
PTPN13-201ENST00000316707 NICN1Q9BSH3 213 aa4.24□□□□□ -1.73
PTPN13-201ENST00000316707 CTDSP1Q9GZU7 261 aa4.24□□□□□ -1.73
PTPN13-201ENST00000316707 LSM5Q9Y4Y9 91 aaKnown RBP4.24□□□□□ -1.73
PTPN13-201ENST00000316707 WSB1Q9Y6I7 421 aa4.24□□□□□ -1.73
PTPN13-201ENST00000316707 A0A0A6YYC8 382 aaPredicted RBP4.24□□□□□ -1.73
PTPN13-201ENST00000316707 ZNF878C9JN71 531 aa4.24□□□□□ -1.73
PTPN13-201ENST00000316707 FTCDNL1E5RQL4 147 aa4.24□□□□□ -1.73
PTPN13-201ENST00000316707 I3L1I5 382 aaPredicted RBP4.24□□□□□ -1.73
PTPN13-201ENST00000316707 SLC31A1O15431 190 aa4.24□□□□□ -1.73
PTPN13-201ENST00000316707 SLC31A2O15432 143 aa4.24□□□□□ -1.73
PTPN13-201ENST00000316707 FOXS1O43638 330 aa4.24□□□□□ -1.73
PTPN13-201ENST00000316707 KNG1P01042 644 aa4.24□□□□□ -1.73
PTPN13-201ENST00000316707 OPN1MWP04001 364 aa4.24□□□□□ -1.73
PTPN13-201ENST00000316707 HCKP08631 526 aa4.24□□□□□ -1.73
PTPN13-201ENST00000316707 CD63P08962 238 aa4.24□□□□□ -1.73
PTPN13-201ENST00000316707 OPN1MW2P0DN77 364 aa4.24□□□□□ -1.73
PTPN13-201ENST00000316707 OPN1MW3P0DN78 364 aa4.24□□□□□ -1.73
PTPN13-201ENST00000316707 FOSL2P15408 326 aa4.24□□□□□ -1.73
PTPN13-201ENST00000316707 SUMO3P55854 103 aaPredicted RBP4.24□□□□□ -1.73
PTPN13-201ENST00000316707 MTCP1P56278 107 aa4.24□□□□□ -1.73
PTPN13-201ENST00000316707 KHDC3LQ587J8 217 aa4.24□□□□□ -1.73
PTPN13-201ENST00000316707 RD3Q7Z3Z2 195 aa4.24□□□□□ -1.73
PTPN13-201ENST00000316707 APCDD1LQ8NCL9 501 aa4.24□□□□□ -1.73
PTPN13-201ENST00000316707 AKR7LQ8NHP1 331 aa4.24□□□□□ -1.73
PTPN13-201ENST00000316707 PP6455Q8WZ26 134 aa4.24□□□□□ -1.73
PTPN13-201ENST00000316707 SLAMF6Q96DU3 332 aa4.24□□□□□ -1.73
PTPN13-201ENST00000316707 PBOV1Q9GZY1 135 aa4.24□□□□□ -1.73
PTPN13-201ENST00000316707 CREBZFQ9NS37 354 aa4.24□□□□□ -1.73
PTPN13-201ENST00000316707 FBXO7Q9Y3I1 522 aa4.24□□□□□ -1.73
PTPN13-201ENST00000316707 A6NCN8 305 aa4.24□□□□□ -1.73
PTPN13-201ENST00000316707 RBFOX3A6NFN3 312 aa4.24□□□□□ -1.73
PTPN13-201ENST00000316707 C9JQL5 133 aa4.24□□□□□ -1.73
PTPN13-201ENST00000316707 PLRG1O43660 514 aaKnown RBP4.24□□□□□ -1.73
PTPN13-201ENST00000316707 SRSF10O75494 262 aaKnown RBP4.24□□□□□ -1.73
PTPN13-201ENST00000316707 TTRP02766 147 aa4.24□□□□□ -1.73
PTPN13-201ENST00000316707 IL12BP29460 328 aa4.24□□□□□ -1.73
PTPN13-201ENST00000316707 VIPR2P41587 438 aa4.24□□□□□ -1.73
PTPN13-201ENST00000316707 GUCA1AP43080 201 aaPredicted RBP4.24□□□□□ -1.73
PTPN13-201ENST00000316707 TLE4Q04727 773 aa4.24□□□□□ -1.73
PTPN13-201ENST00000316707 ACSF3Q4G176 576 aaPredicted RBP4.24□□□□□ -1.73
PTPN13-201ENST00000316707 H1FNTQ75WM6 255 aaPredicted RBP4.24□□□□□ -1.73
PTPN13-201ENST00000316707 LILRB2Q8N423 598 aa4.24□□□□□ -1.73
PTPN13-201ENST00000316707 ZNF383Q8NA42 475 aa4.24□□□□□ -1.73
PTPN13-201ENST00000316707 OR52N4Q8NGI2 321 aa4.24□□□□□ -1.73
PTPN13-201ENST00000316707 PHOSPHO2Q8TCD6 241 aa4.24□□□□□ -1.73
PTPN13-201ENST00000316707 RTN4IP1Q8WWV3 396 aaPredicted RBP4.24□□□□□ -1.73
PTPN13-201ENST00000316707 TVP23CQ96ET8 276 aa4.24□□□□□ -1.73
PTPN13-201ENST00000316707 RTBDNQ9BSG5 229 aaPredicted RBP4.24□□□□□ -1.73
PTPN13-201ENST00000316707 PTRH2Q9Y3E5 179 aaKnown RBP4.24□□□□□ -1.73
PTPN13-201ENST00000316707 V9GYS6 101 aa4.24□□□□□ -1.73
PTPN13-201ENST00000316707 COL4A3Q01955 1670 aa4.24□□□□□ -1.73
PTPN13-201ENST00000316707 PCM1Q15154 2024 aa4.24□□□□□ -1.73
PTPN13-201ENST00000316707 H3BSH0 61 aa4.24□□□□□ -1.73
PTPN13-201ENST00000316707 CDC14BO60729 498 aa4.24□□□□□ -1.73
PTPN13-201ENST00000316707 CRTAPO75718 401 aaPredicted RBP4.24□□□□□ -1.73
PTPN13-201ENST00000316707 OR5AC1P0C628 307 aa4.24□□□□□ -1.73
PTPN13-201ENST00000316707 OR5H8P0DN80 308 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms