RNA–Protein interactions for RNA: ENST00000315286.12

CCDC43-201, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC43, Length 2,082 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-201ENST00000315286 ZNF222Q9UK12 451 aa16.01■□□□□ 0.15
CCDC43-201ENST00000315286 PRRC2CQ9Y520 2896 aaKnown RBP16.01■□□□□ 0.15
CCDC43-201ENST00000315286 MUC6Q6W4X9 2439 aa16.01■□□□□ 0.15
CCDC43-201ENST00000315286 A0A0A6YYD4 124 aa16.01■□□□□ 0.15
CCDC43-201ENST00000315286 A0A1B0GUH1 482 aa16.01■□□□□ 0.15
CCDC43-201ENST00000315286 RPL36A-HNRNPH2H7BZ11 118 aa16.01■□□□□ 0.15
CCDC43-201ENST00000315286 PYCARD-AS1I3L0S3 204 aa16.01■□□□□ 0.15
CCDC43-201ENST00000315286 CDC14BO60729 498 aa16.01■□□□□ 0.15
CCDC43-201ENST00000315286 PRAF2O60831 178 aa16.01■□□□□ 0.15
CCDC43-201ENST00000315286 ALX3O95076 343 aa16.01■□□□□ 0.15
CCDC43-201ENST00000315286 TGM6O95932 706 aa16.01■□□□□ 0.15
CCDC43-201ENST00000315286 GZMKP49863 264 aa16.01■□□□□ 0.15
CCDC43-201ENST00000315286 PRSS12P56730 875 aa16.01■□□□□ 0.15
CCDC43-201ENST00000315286 RNPS1Q15287 305 aaKnown RBP16.01■□□□□ 0.15
CCDC43-201ENST00000315286 PABPC1L2AQ5JQF8 200 aa16.01■□□□□ 0.15
CCDC43-201ENST00000315286 NUFIP2Q7Z417 695 aaKnown RBP16.01■□□□□ 0.15
CCDC43-201ENST00000315286 C1QL2Q7Z5L3 287 aa16.01■□□□□ 0.15
CCDC43-201ENST00000315286 FGD2Q7Z6J4 655 aa16.01■□□□□ 0.15
CCDC43-201ENST00000315286 LIX1LQ8IVB5 337 aa16.01■□□□□ 0.15
CCDC43-201ENST00000315286 PIAS4Q8N2W9 510 aaPredicted RBP16.01■□□□□ 0.15
CCDC43-201ENST00000315286 CPEB3Q8NE35 698 aaKnown RBP16.01■□□□□ 0.15
CCDC43-201ENST00000315286 SEMA6DQ8NFY4 1073 aa16.01■□□□□ 0.15
CCDC43-201ENST00000315286 OR10R2Q8NGX6 335 aa16.01■□□□□ 0.15
CCDC43-201ENST00000315286 KCNG3Q8TAE7 436 aa16.01■□□□□ 0.15
CCDC43-201ENST00000315286 GINS4Q9BRT9 223 aa16.01■□□□□ 0.15
CCDC43-201ENST00000315286 SELENOIQ9C0D9 397 aa16.01■□□□□ 0.15
CCDC43-201ENST00000315286 ZDHHC11Q9H8X9 412 aa16.01■□□□□ 0.15
CCDC43-201ENST00000315286 PLSCR3Q9NRY6 295 aa16.01■□□□□ 0.15
CCDC43-201ENST00000315286 A0A096LPE4 126 aa16■□□□□ 0.15
CCDC43-201ENST00000315286 A0A1W2PPZ6 126 aa16■□□□□ 0.15
CCDC43-201ENST00000315286 ZNF587BE7ETH6 402 aa16■□□□□ 0.15
CCDC43-201ENST00000315286 SSNA1O43805 119 aa16■□□□□ 0.15
CCDC43-201ENST00000315286 MELTFP08582 738 aa16■□□□□ 0.15
CCDC43-201ENST00000315286 GNB3P16520 340 aa16■□□□□ 0.15
CCDC43-201ENST00000315286 RCVRNP35243 200 aa16■□□□□ 0.15
CCDC43-201ENST00000315286 PTGFRP43088 359 aa16■□□□□ 0.15
CCDC43-201ENST00000315286 RBMS2Q15434 407 aaKnown RBP16■□□□□ 0.15
CCDC43-201ENST00000315286 FJX1Q86VR8 437 aa16■□□□□ 0.15
CCDC43-201ENST00000315286 APH1AQ96BI3 265 aa16■□□□□ 0.15
CCDC43-201ENST00000315286 SEC22CQ9BRL7 303 aa16■□□□□ 0.15
CCDC43-201ENST00000315286 CFAP47Q6ZTR5 3102 aa16■□□□□ 0.15
CCDC43-201ENST00000315286 OR6C65A6NJZ3 312 aa15.99■□□□□ 0.15
CCDC43-201ENST00000315286 SCGNO76038 276 aa15.99■□□□□ 0.15
CCDC43-201ENST00000315286 SULT1A3P0DMM9 295 aa15.99■□□□□ 0.15
CCDC43-201ENST00000315286 SULT1A4P0DMN0 295 aa15.99■□□□□ 0.15
CCDC43-201ENST00000315286 CPN1P15169 458 aa15.99■□□□□ 0.15
CCDC43-201ENST00000315286 NBL1P41271 181 aa15.99■□□□□ 0.15
CCDC43-201ENST00000315286 MECP2P51608 486 aaKnown RBP15.99■□□□□ 0.15
CCDC43-201ENST00000315286 FAPQ12884 760 aa15.99■□□□□ 0.15
CCDC43-201ENST00000315286 TNK1Q13470 666 aa15.99■□□□□ 0.15
CCDC43-201ENST00000315286 SF3B4Q15427 424 aaKnown RBP eCLIP15.99■□□□□ 0.15
CCDC43-201ENST00000315286 SLC22A6Q4U2R8 563 aa15.99■□□□□ 0.15
CCDC43-201ENST00000315286 METTL11BQ5VVY1 283 aa15.99■□□□□ 0.15
CCDC43-201ENST00000315286 GLDNQ6ZMI3 551 aaPredicted RBP15.99■□□□□ 0.15
CCDC43-201ENST00000315286 MCEMP1Q8IX19 187 aa15.99■□□□□ 0.15
CCDC43-201ENST00000315286 PNLDC1Q8NA58 520 aaKnown RBP15.99■□□□□ 0.15
CCDC43-201ENST00000315286 PIGTQ969N2 578 aa15.99■□□□□ 0.15
CCDC43-201ENST00000315286 ARHGAP21Q5T5U3 1957 aa15.99■□□□□ 0.15
CCDC43-201ENST00000315286 M0QYG6 137 aa15.99■□□□□ 0.15
CCDC43-201ENST00000315286 FABP7O15540 132 aa15.99■□□□□ 0.15
CCDC43-201ENST00000315286 RAB3DO95716 219 aa15.99■□□□□ 0.15
CCDC43-201ENST00000315286 CYB5AP00167 134 aa15.99■□□□□ 0.15
CCDC43-201ENST00000315286 CHRM2P08172 466 aa15.99■□□□□ 0.15
CCDC43-201ENST00000315286 FCGR2AP12318 317 aa15.99■□□□□ 0.15
CCDC43-201ENST00000315286 CEACAM1P13688 526 aa15.99■□□□□ 0.15
CCDC43-201ENST00000315286 ERP29P30040 261 aaKnown RBP15.99■□□□□ 0.15
CCDC43-201ENST00000315286 GSK3AP49840 483 aa15.99■□□□□ 0.15
CCDC43-201ENST00000315286 NOVA1P51513 510 aaKnown RBP15.99■□□□□ 0.15
CCDC43-201ENST00000315286 NUDCD2Q8WVJ2 157 aa15.99■□□□□ 0.15
CCDC43-201ENST00000315286 NUDT16L1Q9BRJ7 211 aaKnown RBP15.99■□□□□ 0.15
CCDC43-201ENST00000315286 TMEM59Q9BXS4 323 aa15.99■□□□□ 0.15
CCDC43-201ENST00000315286 TINAGL1Q9GZM7 467 aaPredicted RBP15.99■□□□□ 0.15
CCDC43-201ENST00000315286 GPR173Q9NS66 373 aa15.99■□□□□ 0.15
CCDC43-201ENST00000315286 B3GNT2Q9NY97 397 aa15.99■□□□□ 0.15
CCDC43-201ENST00000315286 UPB1Q9UBR1 384 aa15.99■□□□□ 0.15
CCDC43-201ENST00000315286 DHRS7CA6NNS2 312 aa15.98■□□□□ 0.15
CCDC43-201ENST00000315286 TM4SF5O14894 197 aa15.98■□□□□ 0.15
CCDC43-201ENST00000315286 SOCS1O15524 211 aa15.98■□□□□ 0.15
CCDC43-201ENST00000315286 ATP6V1G1O75348 118 aa15.98■□□□□ 0.15
CCDC43-201ENST00000315286 CRTAPO75718 401 aaPredicted RBP15.98■□□□□ 0.15
CCDC43-201ENST00000315286 UBBP0CG47 229 aa15.98■□□□□ 0.15
CCDC43-201ENST00000315286 NAT2P11245 290 aa15.98■□□□□ 0.15
CCDC43-201ENST00000315286 RIPPLY1Q0D2K3 151 aa15.98■□□□□ 0.15
CCDC43-201ENST00000315286 STK11Q15831 433 aa15.98■□□□□ 0.15
CCDC43-201ENST00000315286 TRAPPC6BQ86SZ2 158 aa15.98■□□□□ 0.15
CCDC43-201ENST00000315286 OR4S1Q8NGB4 309 aa15.98■□□□□ 0.15
CCDC43-201ENST00000315286 ING4Q9UNL4 249 aa15.98■□□□□ 0.15
CCDC43-201ENST00000315286 ZNF736B4DX44 427 aaPredicted RBP15.98■□□□□ 0.15
CCDC43-201ENST00000315286 ALDH3B1P43353 468 aa15.98■□□□□ 0.15
CCDC43-201ENST00000315286 CDK10Q15131 360 aa15.98■□□□□ 0.15
CCDC43-201ENST00000315286 PLAC9Q5JTB6 97 aa15.98■□□□□ 0.15
CCDC43-201ENST00000315286 ZNF584Q8IVC4 421 aa15.98■□□□□ 0.15
CCDC43-201ENST00000315286 ZNF100Q8IYN0 542 aa15.98■□□□□ 0.15
CCDC43-201ENST00000315286 GVQW1Q8N7I0 195 aa15.98■□□□□ 0.15
CCDC43-201ENST00000315286 TNFAIP8L1Q8WVP5 186 aa15.98■□□□□ 0.15
CCDC43-201ENST00000315286 MED30Q96HR3 178 aa15.98■□□□□ 0.15
CCDC43-201ENST00000315286 NPDC1Q9NQX5 325 aaPredicted RBP15.98■□□□□ 0.15
CCDC43-201ENST00000315286 ZNF107Q9UII5 783 aaPredicted RBP15.98■□□□□ 0.15
CCDC43-201ENST00000315286 MED12LQ86YW9 2145 aa15.97■□□□□ 0.15
CCDC43-201ENST00000315286 TNRC6AQ8NDV7 1962 aaKnown RBP15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms