RNA–Protein interactions for RNA: ENST00000311943.11

SCFD1-201, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 2,016 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-201ENST00000311943 IGLV3-1P01715 115 aa10.11□□□□□ -0.79
SCFD1-201ENST00000311943 TUBG1P23258 451 aa10.11□□□□□ -0.79
SCFD1-201ENST00000311943 AQP4P55087 323 aa10.11□□□□□ -0.79
SCFD1-201ENST00000311943 ISL1P61371 349 aa10.11□□□□□ -0.79
SCFD1-201ENST00000311943 LCN2P80188 198 aa10.11□□□□□ -0.79
SCFD1-201ENST00000311943 PRDX4Q13162 271 aa10.11□□□□□ -0.79
SCFD1-201ENST00000311943 OR8B8Q15620 311 aa10.11□□□□□ -0.79
SCFD1-201ENST00000311943 CYB5R2Q6BCY4 276 aa10.11□□□□□ -0.79
SCFD1-201ENST00000311943 C1orf229Q6ZS94 237 aaPredicted RBP10.11□□□□□ -0.79
SCFD1-201ENST00000311943 OR52H1Q8NGJ2 320 aa10.11□□□□□ -0.79
SCFD1-201ENST00000311943 OR51A4Q8NGJ6 313 aa10.11□□□□□ -0.79
SCFD1-201ENST00000311943 OR52I1Q8NGK6 324 aa10.11□□□□□ -0.79
SCFD1-201ENST00000311943 RPL3LQ92901 407 aaKnown RBP10.11□□□□□ -0.79
SCFD1-201ENST00000311943 ITPKCQ96DU7 683 aa10.11□□□□□ -0.79
SCFD1-201ENST00000311943 POM121Q96HA1 1249 aa10.11□□□□□ -0.79
SCFD1-201ENST00000311943 GAL3ST1Q99999 423 aa10.11□□□□□ -0.79
SCFD1-201ENST00000311943 ZNF665Q9H7R5 613 aa10.11□□□□□ -0.79
SCFD1-201ENST00000311943 MMP26Q9NRE1 261 aa10.11□□□□□ -0.79
SCFD1-201ENST00000311943 TUBG2Q9NRH3 451 aa10.11□□□□□ -0.79
SCFD1-201ENST00000311943 C1orf123Q9NWV4 160 aa10.11□□□□□ -0.79
SCFD1-201ENST00000311943 CLEC2DQ9UHP7 191 aa10.11□□□□□ -0.79
SCFD1-201ENST00000311943 NPTNQ9Y639 398 aa10.11□□□□□ -0.79
SCFD1-201ENST00000311943 R4GMQ9 66 aa10.11□□□□□ -0.79
SCFD1-201ENST00000311943 FBN1P35555 2871 aaKnown RBP10.1□□□□□ -0.79
SCFD1-201ENST00000311943 J3QLW9 94 aa10.1□□□□□ -0.79
SCFD1-201ENST00000311943 RHBDL1O75783 438 aa10.1□□□□□ -0.79
SCFD1-201ENST00000311943 ZNF19P17023 458 aa10.1□□□□□ -0.79
SCFD1-201ENST00000311943 CHN2P52757 468 aa10.1□□□□□ -0.79
SCFD1-201ENST00000311943 MRPS11P82912 194 aaKnown RBP10.1□□□□□ -0.79
SCFD1-201ENST00000311943 ZNF154Q13106 437 aa10.1□□□□□ -0.79
SCFD1-201ENST00000311943 SLC25A30Q5SVS4 291 aa10.1□□□□□ -0.79
SCFD1-201ENST00000311943 OR2G6Q5TZ20 316 aa10.1□□□□□ -0.79
SCFD1-201ENST00000311943 OR5T2Q8NGG2 359 aa10.1□□□□□ -0.79
SCFD1-201ENST00000311943 C4orf36Q96KX1 117 aa10.1□□□□□ -0.79
SCFD1-201ENST00000311943 ADI1Q9BV57 179 aa10.1□□□□□ -0.79
SCFD1-201ENST00000311943 WDR13Q9H1Z4 485 aa10.1□□□□□ -0.79
SCFD1-201ENST00000311943 TMEM165Q9HC07 324 aa10.1□□□□□ -0.79
SCFD1-201ENST00000311943 FRRS1LQ9P0K9 344 aa10.1□□□□□ -0.79
SCFD1-201ENST00000311943 CGGBP1Q9UFW8 167 aaPredicted RBP10.1□□□□□ -0.79
SCFD1-201ENST00000311943 NUFIP1Q9UHK0 495 aaKnown RBP10.1□□□□□ -0.79
SCFD1-201ENST00000311943 FBXO9Q9UK97 447 aaPredicted RBP10.1□□□□□ -0.79
SCFD1-201ENST00000311943 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.1□□□□□ -0.79
SCFD1-201ENST00000311943 EXOGQ9Y2C4 368 aaKnown RBP10.1□□□□□ -0.79
SCFD1-201ENST00000311943 DAPL1A0PJW8 107 aa10.09□□□□□ -0.79
SCFD1-201ENST00000311943 METTL15A6NJ78 407 aa10.09□□□□□ -0.79
SCFD1-201ENST00000311943 A6NLC8 198 aa10.09□□□□□ -0.79
SCFD1-201ENST00000311943 A8MV72 311 aaPredicted RBP10.09□□□□□ -0.79
SCFD1-201ENST00000311943 CDIPTO14735 213 aa10.09□□□□□ -0.79
SCFD1-201ENST00000311943 PLPP2O43688 288 aa10.09□□□□□ -0.79
SCFD1-201ENST00000311943 INMTO95050 263 aa10.09□□□□□ -0.79
SCFD1-201ENST00000311943 IGHV2-5P01817 119 aa10.09□□□□□ -0.79
SCFD1-201ENST00000311943 TNFRSF1AP19438 455 aa10.09□□□□□ -0.79
SCFD1-201ENST00000311943 TNFSF4P23510 183 aa10.09□□□□□ -0.79
SCFD1-201ENST00000311943 CDH15P55291 814 aa10.09□□□□□ -0.79
SCFD1-201ENST00000311943 BTG1P62324 171 aa10.09□□□□□ -0.79
SCFD1-201ENST00000311943 SLC34A1Q06495 639 aa10.09□□□□□ -0.79
SCFD1-201ENST00000311943 EGR3Q06889 387 aa10.09□□□□□ -0.79
SCFD1-201ENST00000311943 ZMAT1Q5H9K5 638 aa10.09□□□□□ -0.79
SCFD1-201ENST00000311943 CATSPERDQ86XM0 798 aa10.09□□□□□ -0.79
SCFD1-201ENST00000311943 ELMOD2Q8IZ81 293 aa10.09□□□□□ -0.79
SCFD1-201ENST00000311943 GCSAMQ8N6F7 178 aa10.09□□□□□ -0.79
SCFD1-201ENST00000311943 ZNF540Q8NDQ6 660 aa10.09□□□□□ -0.79
SCFD1-201ENST00000311943 ZNF555Q8NEP9 628 aa10.09□□□□□ -0.79
SCFD1-201ENST00000311943 NPRL2Q8WTW4 380 aa10.09□□□□□ -0.79
SCFD1-201ENST00000311943 ASB17Q8WXJ9 295 aa10.09□□□□□ -0.79
SCFD1-201ENST00000311943 PELI1Q96FA3 418 aa10.09□□□□□ -0.79
SCFD1-201ENST00000311943 ZNF488Q96MN9 340 aa10.09□□□□□ -0.79
SCFD1-201ENST00000311943 DIRC2Q96SL1 478 aa10.09□□□□□ -0.79
SCFD1-201ENST00000311943 NKX3-1Q99801 234 aaPredicted RBP10.09□□□□□ -0.79
SCFD1-201ENST00000311943 DCLRE1BQ9H816 532 aa10.09□□□□□ -0.79
SCFD1-201ENST00000311943 GPR173Q9NS66 373 aa10.09□□□□□ -0.79
SCFD1-201ENST00000311943 MRPL15Q9P015 296 aaKnown RBP10.09□□□□□ -0.79
SCFD1-201ENST00000311943 PIGLQ9Y2B2 252 aa10.09□□□□□ -0.79
SCFD1-201ENST00000311943 TMEM14AQ9Y6G1 99 aa10.09□□□□□ -0.79
SCFD1-201ENST00000311943 ANKRD30BLA7E2S9 258 aa10.09□□□□□ -0.79
SCFD1-201ENST00000311943 KIAA1324LA8MWY0 1029 aaPredicted RBP10.09□□□□□ -0.79
SCFD1-201ENST00000311943 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.09□□□□□ -0.79
SCFD1-201ENST00000311943 LALBAP00709 142 aa10.09□□□□□ -0.79
SCFD1-201ENST00000311943 KRT8P05787 483 aa10.09□□□□□ -0.79
SCFD1-201ENST00000311943 CD200P41217 278 aa10.09□□□□□ -0.79
SCFD1-201ENST00000311943 ETV1P50549 477 aa10.09□□□□□ -0.79
SCFD1-201ENST00000311943 GPM6AP51674 278 aa10.09□□□□□ -0.79
SCFD1-201ENST00000311943 BCL2L15Q5TBC7 163 aa10.09□□□□□ -0.79
SCFD1-201ENST00000311943 DEGS2Q6QHC5 323 aa10.09□□□□□ -0.79
SCFD1-201ENST00000311943 DHRSXQ8N5I4 330 aa10.09□□□□□ -0.79
SCFD1-201ENST00000311943 OR14K1Q8NGZ2 314 aa10.09□□□□□ -0.79
SCFD1-201ENST00000311943 OR8S1Q8NH09 359 aa10.09□□□□□ -0.79
SCFD1-201ENST00000311943 RFKQ969G6 155 aa10.09□□□□□ -0.79
SCFD1-201ENST00000311943 TMEM246Q9BRR3 403 aa10.09□□□□□ -0.79
SCFD1-201ENST00000311943 SP140LQ9H930 580 aa10.09□□□□□ -0.79
SCFD1-201ENST00000311943 RNPEPL1Q9HAU8 725 aa10.09□□□□□ -0.79
SCFD1-201ENST00000311943 CTSZQ9UBR2 303 aa10.09□□□□□ -0.79
SCFD1-201ENST00000311943 SIRT4Q9Y6E7 314 aaPredicted RBP10.09□□□□□ -0.79
SCFD1-201ENST00000311943 WNK2Q9Y3S1 2297 aa10.08□□□□□ -0.8
SCFD1-201ENST00000311943 hCG_1807616A0A1W2PRN6 198 aa10.08□□□□□ -0.8
SCFD1-201ENST00000311943 CEACAM18A8MTB9 384 aa10.08□□□□□ -0.8
SCFD1-201ENST00000311943 AKR7A2O43488 359 aa10.08□□□□□ -0.8
SCFD1-201ENST00000311943 ZNF254O75437 659 aa10.08□□□□□ -0.8
SCFD1-201ENST00000311943 LIMS3P0CW19 117 aa10.08□□□□□ -0.8
SCFD1-201ENST00000311943 LIMS4P0CW20 117 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms