RNA–Protein interactions for RNA: ENST00000310397.12

SNED1-201, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SNED1, Length 8,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-201ENST00000310397 GLI4P10075 376 aa11.88□□□□□ -0.51
SNED1-201ENST00000310397 SHBQ15464 509 aa11.88□□□□□ -0.51
SNED1-201ENST00000310397 STPG2Q8N412 459 aa11.88□□□□□ -0.51
SNED1-201ENST00000310397 OR13H1Q8NG92 308 aa11.88□□□□□ -0.51
SNED1-201ENST00000310397 GPR32P1Q8NGA4 272 aa11.88□□□□□ -0.51
SNED1-201ENST00000310397 RPH3ALQ9UNE2 315 aa11.88□□□□□ -0.51
SNED1-201ENST00000310397 SBF2Q86WG5 1849 aa11.88□□□□□ -0.51
SNED1-201ENST00000310397 GLI3P10071 1580 aa11.88□□□□□ -0.51
SNED1-201ENST00000310397 C4orf17Q53FE4 359 aa11.88□□□□□ -0.51
SNED1-201ENST00000310397 LIMS2Q7Z4I7 341 aa11.88□□□□□ -0.51
SNED1-201ENST00000310397 GDF2Q9UK05 429 aaPredicted RBP11.88□□□□□ -0.51
SNED1-201ENST00000310397 V9GYH0 126 aa11.88□□□□□ -0.51
SNED1-201ENST00000310397 CTAG2O75638 210 aa11.88□□□□□ -0.51
SNED1-201ENST00000310397 ARR3P36575 388 aa11.88□□□□□ -0.51
SNED1-201ENST00000310397 FAM96BQ9Y3D0 163 aa11.88□□□□□ -0.51
SNED1-201ENST00000310397 PRRT4C9JH25 899 aa11.88□□□□□ -0.51
SNED1-201ENST00000310397 NKAIN2Q5VXU1 208 aa11.88□□□□□ -0.51
SNED1-201ENST00000310397 LRP12Q9Y561 859 aa11.88□□□□□ -0.51
SNED1-201ENST00000310397 CCDC187A0A096LP49 1063 aa11.88□□□□□ -0.51
SNED1-201ENST00000310397 LINC00862A6NCI5 91 aa11.88□□□□□ -0.51
SNED1-201ENST00000310397 MPC2O95563 127 aa11.88□□□□□ -0.51
SNED1-201ENST00000310397 ABI3BPQ7Z7G0 1075 aa11.88□□□□□ -0.51
SNED1-201ENST00000310397 FBXL6Q8N531 539 aa11.88□□□□□ -0.51
SNED1-201ENST00000310397 NECAP1Q8NC96 275 aa11.88□□□□□ -0.51
SNED1-201ENST00000310397 APH1AQ96BI3 265 aa11.88□□□□□ -0.51
SNED1-201ENST00000310397 ST3GAL6Q9Y274 331 aa11.88□□□□□ -0.51
SNED1-201ENST00000310397 ELSPBP1Q96BH3 223 aa11.87□□□□□ -0.51
SNED1-201ENST00000310397 FGF7P21781 194 aa11.87□□□□□ -0.51
SNED1-201ENST00000310397 GUCA2AQ02747 115 aa11.87□□□□□ -0.51
SNED1-201ENST00000310397 GPR119Q8TDV5 335 aa11.87□□□□□ -0.51
SNED1-201ENST00000310397 C9orf170A2RU37 121 aa11.87□□□□□ -0.51
SNED1-201ENST00000310397 J3QR89 54 aa11.87□□□□□ -0.51
SNED1-201ENST00000310397 UBE2G2P60604 165 aa11.87□□□□□ -0.51
SNED1-201ENST00000310397 PRAMEF5Q5TYX0 476 aa11.87□□□□□ -0.51
SNED1-201ENST00000310397 PRAMEF6Q5VXH4 476 aa11.87□□□□□ -0.51
SNED1-201ENST00000310397 RHBDD1Q8TEB9 315 aa11.87□□□□□ -0.51
SNED1-201ENST00000310397 CTDSP1Q9GZU7 261 aa11.87□□□□□ -0.51
SNED1-201ENST00000310397 WDR1O75083 606 aa11.87□□□□□ -0.51
SNED1-201ENST00000310397 AVPR2P30518 371 aa11.87□□□□□ -0.51
SNED1-201ENST00000310397 PLA1AQ53H76 456 aa11.87□□□□□ -0.51
SNED1-201ENST00000310397 ZNF391Q9UJN7 358 aa11.87□□□□□ -0.51
SNED1-201ENST00000310397 ANKRD20A5PA0PJZ0 165 aa11.87□□□□□ -0.51
SNED1-201ENST00000310397 NQO2P16083 231 aa11.87□□□□□ -0.51
SNED1-201ENST00000310397 GSK3AP49840 483 aa11.87□□□□□ -0.51
SNED1-201ENST00000310397 PPP1CBP62140 327 aa11.87□□□□□ -0.51
SNED1-201ENST00000310397 UBE2G1P62253 170 aa11.87□□□□□ -0.51
SNED1-201ENST00000310397 OSR2Q8N2R0 312 aa11.87□□□□□ -0.51
SNED1-201ENST00000310397 ZNF764Q96H86 408 aaPredicted RBP11.87□□□□□ -0.51
SNED1-201ENST00000310397 MBTPS2O43462 519 aa11.87□□□□□ -0.51
SNED1-201ENST00000310397 IGFBP6P24592 240 aaPredicted RBP11.87□□□□□ -0.51
SNED1-201ENST00000310397 THBS4P35443 961 aa11.87□□□□□ -0.51
SNED1-201ENST00000310397 MEOX2P50222 304 aa11.87□□□□□ -0.51
SNED1-201ENST00000310397 C19orf57Q0VDD7 668 aa11.87□□□□□ -0.51
SNED1-201ENST00000310397 Q7L0L9 218 aa11.87□□□□□ -0.51
SNED1-201ENST00000310397 C9orf62Q8N4C0 152 aa11.87□□□□□ -0.51
SNED1-201ENST00000310397 SPSB1Q96BD6 273 aa11.87□□□□□ -0.51
SNED1-201ENST00000310397 PSENENQ9NZ42 101 aa11.87□□□□□ -0.51
SNED1-201ENST00000310397 PPP1R3CQ9UQK1 317 aa11.87□□□□□ -0.51
SNED1-201ENST00000310397 GBF1Q92538 1859 aa11.86□□□□□ -0.51
SNED1-201ENST00000310397 LRRC30A6NM36 301 aa11.86□□□□□ -0.51
SNED1-201ENST00000310397 NAT1P18440 290 aa11.86□□□□□ -0.51
SNED1-201ENST00000310397 FAM234AQ9H0X4 552 aa11.86□□□□□ -0.51
SNED1-201ENST00000310397 HIF1ANQ9NWT6 349 aa11.86□□□□□ -0.51
SNED1-201ENST00000310397 SLC17A4Q9Y2C5 497 aa11.86□□□□□ -0.51
SNED1-201ENST00000310397 POM121BA6NF01 834 aa11.86□□□□□ -0.51
SNED1-201ENST00000310397 WNT11O96014 354 aa11.86□□□□□ -0.51
SNED1-201ENST00000310397 CD27P26842 260 aa11.86□□□□□ -0.51
SNED1-201ENST00000310397 NOVA1P51513 510 aaKnown RBP11.86□□□□□ -0.51
SNED1-201ENST00000310397 CLN3Q13286 438 aa11.86□□□□□ -0.51
SNED1-201ENST00000310397 WBP2Q969T9 261 aa11.86□□□□□ -0.51
SNED1-201ENST00000310397 FER1L6-AS2Q96M78 137 aa11.86□□□□□ -0.51
SNED1-201ENST00000310397 PRRX2Q99811 253 aa11.86□□□□□ -0.51
SNED1-201ENST00000310397 R3HDMLQ9H3Y0 253 aa11.86□□□□□ -0.51
SNED1-201ENST00000310397 WSB2Q9NYS7 404 aaPredicted RBP11.86□□□□□ -0.51
SNED1-201ENST00000310397 OR5V1Q9UGF6 321 aa11.86□□□□□ -0.51
SNED1-201ENST00000310397 ZNF107Q9UII5 783 aaPredicted RBP11.86□□□□□ -0.51
SNED1-201ENST00000310397 PSME4Q14997 1843 aa11.86□□□□□ -0.51
SNED1-201ENST00000310397 A0A1W2PPQ1 181 aa11.86□□□□□ -0.51
SNED1-201ENST00000310397 ST6GAL1P15907 406 aa11.86□□□□□ -0.51
SNED1-201ENST00000310397 ZNF429Q86V71 674 aa11.86□□□□□ -0.51
SNED1-201ENST00000310397 SPPL3Q8TCT6 385 aa11.86□□□□□ -0.51
SNED1-201ENST00000310397 RD3LP0DJH9 198 aa11.86□□□□□ -0.51
SNED1-201ENST00000310397 CDONQ4KMG0 1287 aa11.86□□□□□ -0.51
SNED1-201ENST00000310397 SLC35E1Q96K37 410 aa11.86□□□□□ -0.51
SNED1-201ENST00000310397 SULT1A3P0DMM9 295 aa11.86□□□□□ -0.51
SNED1-201ENST00000310397 SULT1A4P0DMN0 295 aa11.86□□□□□ -0.51
SNED1-201ENST00000310397 CHRNB4P30926 498 aa11.86□□□□□ -0.51
SNED1-201ENST00000310397 RAB35Q15286 201 aa11.86□□□□□ -0.51
SNED1-201ENST00000310397 ZNF574Q6ZN55 896 aaPredicted RBP11.86□□□□□ -0.51
SNED1-201ENST00000310397 RPS19BP1Q86WX3 136 aaKnown RBP11.86□□□□□ -0.51
SNED1-201ENST00000310397 OIT3Q8WWZ8 545 aa11.86□□□□□ -0.51
SNED1-201ENST00000310397 VPS25Q9BRG1 176 aa11.86□□□□□ -0.51
SNED1-201ENST00000310397 CLEC18AA5D8T8 446 aa11.86□□□□□ -0.51
SNED1-201ENST00000310397 IDSB3KWA1 339 aa11.86□□□□□ -0.51
SNED1-201ENST00000310397 EFSO43281 561 aa11.86□□□□□ -0.51
SNED1-201ENST00000310397 PXNP49023 591 aaPredicted RBP11.86□□□□□ -0.51
SNED1-201ENST00000310397 OR8G1Q15617 311 aa11.86□□□□□ -0.51
SNED1-201ENST00000310397 MRM1Q6IN84 353 aaKnown RBP11.86□□□□□ -0.51
SNED1-201ENST00000310397 CLEC18CQ8NCF0 446 aa11.86□□□□□ -0.51
SNED1-201ENST00000310397 PAPPA2Q9BXP8 1791 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms