RNA–Protein interactions for RNA: ENST00000306641.1

CSPG4P1Y-201, Transcript of CSPG4 pseudogene 1 Y-linked, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P1Y, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P1Y-201ENST00000306641 ZDHHC23Q8IYP9 409 aa9.31□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 SYS1Q8N2H4 156 aa9.31□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 STX19Q8N4C7 294 aa9.31□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 KLHL36Q8N4N3 616 aa9.31□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 CCDC54Q8NEL0 328 aa9.31□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 BPIFB6Q8NFQ5 453 aa9.31□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 PIGCQ92535 297 aa9.31□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 RORBQ92753 470 aa9.31□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 ERGIC1Q969X5 290 aa9.31□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 MICU1Q9BPX6 476 aa9.31□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 RTL8AQ9BWD3 113 aa9.31□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 NARFLQ9H6Q4 476 aa9.31□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 FN3KRPQ9HA64 309 aa9.31□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 FGF20Q9NP95 211 aaPredicted RBP9.31□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 TMEM106BQ9NUM4 274 aa9.31□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 CNOT2Q9NZN8 540 aaKnown RBP9.31□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 ENPP5Q9UJA9 477 aa9.31□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 SLC22A13Q9Y226 551 aa9.31□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 PIGLQ9Y2B2 252 aa9.31□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 MPC1Q9Y5U8 109 aa9.31□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 CACNG2Q9Y698 323 aa9.31□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 AKAP9Q99996 3911 aa9.31□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 IGHV4-61A0A0C4DH41 118 aa9.3□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 IGHV3-64DA0A0J9YX35 117 aa9.3□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 A0A1B0GWJ7 208 aa9.3□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 hCG_1807616A0A1W2PRN6 198 aa9.3□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 ZNF850A8MQ14 1090 aa9.3□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 SYT7O43581 403 aa9.3□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 CST4P01036 141 aa9.3□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 IGLV3-1P01715 115 aa9.3□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 CCDC159P0C7I6 412 aa9.3□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 PIPP12273 146 aaPredicted RBP9.3□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 ZNF12P17014 697 aa9.3□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 ACKR3P25106 362 aa9.3□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 MVKQ03426 396 aa9.3□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 SPRNQ5BIV9 151 aa9.3□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 AVPI1Q5T686 147 aa9.3□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 ZBTB37Q5TC79 503 aa9.3□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 TMEM244Q5VVB8 128 aa9.3□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 PRAMEF6Q5VXH4 476 aa9.3□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 CLEC9AQ6UXN8 241 aa9.3□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 AHSA2Q719I0 299 aa9.3□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 MOGAT3Q86VF5 341 aa9.3□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 EGFL6Q8IUX8 553 aa9.3□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 OR2G2Q8NGZ5 317 aa9.3□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 ZNF420Q8TAQ5 688 aaPredicted RBP9.3□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 PELI1Q96FA3 418 aa9.3□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 TMEM80Q96HE8 168 aa9.3□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 GAL3ST1Q99999 423 aa9.3□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 JAM3Q9BX67 310 aa9.3□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 ANKRD60Q9BZ19 345 aa9.3□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 COMMD4Q9H0A8 199 aa9.3□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 Q9H521 79 aa9.3□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 GCM1Q9NP62 436 aa9.3□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 SCN3BQ9NY72 215 aa9.3□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 DIMT1Q9UNQ2 313 aaKnown RBP9.3□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 CAB39Q9Y376 341 aaPredicted RBP9.3□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 RHBDD3Q9Y3P4 386 aa9.3□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 WIPI2Q9Y4P8 454 aa9.3□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 NPTNQ9Y639 398 aa9.3□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 F8P00451 2351 aa9.3□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 A0A096LNT2 108 aa9.29□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 LOC107986453A0A1B0GWG9 222 aa9.29□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 LRP5LA4QPB2 252 aa9.29□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 DHRS7CA6NNS2 312 aa9.29□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 SLC1A7O00341 560 aa9.29□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 MYL12BO14950 172 aa9.29□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 XPNPEP2O43895 674 aa9.29□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 GRPP07492 148 aa9.29□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 RPSAP08865 295 aaKnown RBP9.29□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 FAHP16930 419 aa9.29□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 MYF6P23409 242 aa9.29□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 GATA4P43694 442 aa9.29□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 GZMKP49863 264 aa9.29□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 CDH15P55291 814 aa9.29□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 CSNK2BP67870 215 aa9.29□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 ST3GAL4Q11206 333 aa9.29□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 MAB21L1Q13394 359 aa9.29□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 ALKBH1Q13686 389 aaKnown RBP9.29□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 TMEM249Q2WGJ8 235 aa9.29□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 PLCXD3Q63HM9 321 aa9.29□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 PRSS35Q8N3Z0 413 aa9.29□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 ZNF676Q8N7Q3 588 aa9.29□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 PLPP7Q8NBV4 271 aa9.29□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 FBLIM1Q8WUP2 373 aa9.29□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 GGHQ92820 318 aa9.29□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 PPP1R14AQ96A00 147 aa9.29□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 RAB39BQ96DA2 213 aa9.29□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 CNBD2Q96M20 576 aa9.29□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 SOX7Q9BT81 388 aa9.29□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 PLCXD1Q9NUJ7 323 aa9.29□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 UFSP2Q9NUQ7 469 aa9.29□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 RAB26Q9ULW5 256 aa9.29□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 V9GYS6 101 aa9.29□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 DOCK11Q5JSL3 2073 aa9.28□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 ITPR3Q14573 2671 aa9.28□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 TMEM210A6NLX4 147 aa9.28□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 TMEM212A6NML5 194 aa9.28□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 TMEM178BH3BS89 294 aa9.28□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 H3BSH0 61 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms