RNA–Protein interactions for RNA: ENST00000306149.11

CSDC2-201, Transcript of cold shock domain containing C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDC2, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDC2-201ENST00000306149 BHLHE23Q8NDY6 225 aa13.34□□□□□ -0.27
CSDC2-201ENST00000306149 OR1S2Q8NGQ3 325 aa13.34□□□□□ -0.27
CSDC2-201ENST00000306149 DNASE2BQ8WZ79 361 aa13.34□□□□□ -0.27
CSDC2-201ENST00000306149 RASL10BQ96S79 203 aa13.34□□□□□ -0.27
CSDC2-201ENST00000306149 ST6GALNAC5Q9BVH7 336 aa13.34□□□□□ -0.27
CSDC2-201ENST00000306149 PNRC2Q9NPJ4 139 aaKnown RBP13.34□□□□□ -0.27
CSDC2-201ENST00000306149 PURGQ9UJV8 347 aaKnown RBP13.34□□□□□ -0.27
CSDC2-201ENST00000306149 COL6A3P12111 3177 aa13.34□□□□□ -0.27
CSDC2-201ENST00000306149 TRBV6-7A0A0A0MS04 114 aa13.34□□□□□ -0.27
CSDC2-201ENST00000306149 IGKV1-9A0A0C4DH69 117 aa13.34□□□□□ -0.27
CSDC2-201ENST00000306149 ZNF726A6NNF4 738 aa13.34□□□□□ -0.27
CSDC2-201ENST00000306149 G3V3Y1 287 aa13.34□□□□□ -0.27
CSDC2-201ENST00000306149 ADAP1O75689 374 aa13.34□□□□□ -0.27
CSDC2-201ENST00000306149 HTR3BO95264 441 aa13.34□□□□□ -0.27
CSDC2-201ENST00000306149 PGAM2P15259 253 aa13.34□□□□□ -0.27
CSDC2-201ENST00000306149 CLDN17P56750 224 aa13.34□□□□□ -0.27
CSDC2-201ENST00000306149 ACY1Q03154 408 aa13.34□□□□□ -0.27
CSDC2-201ENST00000306149 CCDC157Q569K6 752 aa13.34□□□□□ -0.27
CSDC2-201ENST00000306149 SLC25A47Q6Q0C1 308 aa13.34□□□□□ -0.27
CSDC2-201ENST00000306149 HOGA1Q86XE5 327 aa13.34□□□□□ -0.27
CSDC2-201ENST00000306149 PIK3IP1Q96FE7 263 aa13.34□□□□□ -0.27
CSDC2-201ENST00000306149 TMEM59Q9BXS4 323 aa13.34□□□□□ -0.27
CSDC2-201ENST00000306149 NMES1Q9C002 83 aa13.34□□□□□ -0.27
CSDC2-201ENST00000306149 PCED1AQ9H1Q7 454 aa13.34□□□□□ -0.27
CSDC2-201ENST00000306149 CHMP1AQ9HD42 196 aaPredicted RBP13.34□□□□□ -0.27
CSDC2-201ENST00000306149 RARRES3Q9UL19 164 aa13.34□□□□□ -0.27
CSDC2-201ENST00000306149 ANAPC10Q9UM13 185 aa13.34□□□□□ -0.27
CSDC2-201ENST00000306149 CSAG2Q9Y5P2 127 aa13.34□□□□□ -0.27
CSDC2-201ENST00000306149 F5H5K5 113 aa13.33□□□□□ -0.27
CSDC2-201ENST00000306149 PSMB6P28072 239 aa13.33□□□□□ -0.27
CSDC2-201ENST00000306149 FLI1Q01543 452 aaPredicted RBP13.33□□□□□ -0.27
CSDC2-201ENST00000306149 STK11Q15831 433 aa13.33□□□□□ -0.27
CSDC2-201ENST00000306149 PNLIPRP3Q17RR3 467 aa13.33□□□□□ -0.27
CSDC2-201ENST00000306149 OR4K17Q8NGC6 315 aa13.33□□□□□ -0.27
CSDC2-201ENST00000306149 OR5AP2Q8NGF4 316 aa13.33□□□□□ -0.27
CSDC2-201ENST00000306149 DEFB126Q9BYW3 111 aa13.33□□□□□ -0.27
CSDC2-201ENST00000306149 FANCFQ9NPI8 374 aa13.33□□□□□ -0.27
CSDC2-201ENST00000306149 TEX13DA0A0J9YY54 714 aaPredicted RBP13.33□□□□□ -0.28
CSDC2-201ENST00000306149 ETV2O00321 342 aaPredicted RBP13.33□□□□□ -0.28
CSDC2-201ENST00000306149 HIST1H1DP16402 221 aaKnown RBP13.33□□□□□ -0.28
CSDC2-201ENST00000306149 ARFRP1Q13795 201 aa13.33□□□□□ -0.28
CSDC2-201ENST00000306149 TDHQ8IZJ6 230 aa13.33□□□□□ -0.28
CSDC2-201ENST00000306149 LRRC18Q8N456 261 aa13.33□□□□□ -0.28
CSDC2-201ENST00000306149 TERB2Q8NHR7 220 aa13.33□□□□□ -0.28
CSDC2-201ENST00000306149 C5orf66Q9H5L9 145 aa13.33□□□□□ -0.28
CSDC2-201ENST00000306149 ASF1BQ9NVP2 202 aa13.33□□□□□ -0.28
CSDC2-201ENST00000306149 MRPS17Q9Y2R5 130 aaKnown RBP13.33□□□□□ -0.28
CSDC2-201ENST00000306149 PRELID3BQ9Y3B1 194 aa13.33□□□□□ -0.28
CSDC2-201ENST00000306149 IGHV5-10-1A0A0J9YXX1 117 aa13.32□□□□□ -0.28
CSDC2-201ENST00000306149 MSX1P28360 303 aa13.32□□□□□ -0.28
CSDC2-201ENST00000306149 DHPSP49366 369 aaPredicted RBP13.32□□□□□ -0.28
CSDC2-201ENST00000306149 CTAG1AP78358 180 aa13.32□□□□□ -0.28
CSDC2-201ENST00000306149 NAAAQ02083 359 aa13.32□□□□□ -0.28
CSDC2-201ENST00000306149 SLC25A53Q5H9E4 307 aa13.32□□□□□ -0.28
CSDC2-201ENST00000306149 RNF138Q8WVD3 245 aa13.32□□□□□ -0.28
CSDC2-201ENST00000306149 DCUN1D4Q92564 292 aa13.32□□□□□ -0.28
CSDC2-201ENST00000306149 ZNF775Q96BV0 537 aaPredicted RBP13.32□□□□□ -0.28
CSDC2-201ENST00000306149 CDC6Q99741 560 aa13.32□□□□□ -0.28
CSDC2-201ENST00000306149 UBE2ZQ9H832 354 aaPredicted RBP13.32□□□□□ -0.28
CSDC2-201ENST00000306149 OCIAD1Q9NX40 245 aa13.32□□□□□ -0.28
CSDC2-201ENST00000306149 SLC39A1Q9NY26 324 aa13.32□□□□□ -0.28
CSDC2-201ENST00000306149 TMEM218A2RU14 115 aa13.32□□□□□ -0.28
CSDC2-201ENST00000306149 MASP2O00187 686 aa13.32□□□□□ -0.28
CSDC2-201ENST00000306149 H2AFB1P0C5Y9 115 aa13.32□□□□□ -0.28
CSDC2-201ENST00000306149 TPT1P13693 172 aaKnown RBP13.32□□□□□ -0.28
CSDC2-201ENST00000306149 SLC6A9P48067 706 aa13.32□□□□□ -0.28
CSDC2-201ENST00000306149 PHYHD1Q5SRE7 291 aa13.32□□□□□ -0.28
CSDC2-201ENST00000306149 SLC30A7Q8NEW0 376 aa13.32□□□□□ -0.28
CSDC2-201ENST00000306149 OR6X1Q8NH79 312 aa13.32□□□□□ -0.28
CSDC2-201ENST00000306149 KCNG3Q8TAE7 436 aa13.32□□□□□ -0.28
CSDC2-201ENST00000306149 TMEM230Q96A57 120 aa13.32□□□□□ -0.28
CSDC2-201ENST00000306149 SPACA9Q96E40 222 aaPredicted RBP13.32□□□□□ -0.28
CSDC2-201ENST00000306149 RRNAD1Q96FB5 475 aaKnown RBP13.32□□□□□ -0.28
CSDC2-201ENST00000306149 OXGR1Q96P68 337 aa13.32□□□□□ -0.28
CSDC2-201ENST00000306149 TMEM100Q9NV29 134 aa13.32□□□□□ -0.28
CSDC2-201ENST00000306149 PISDQ9UG56 409 aa13.32□□□□□ -0.28
CSDC2-201ENST00000306149 SIGLEC6O43699 453 aa13.32□□□□□ -0.28
CSDC2-201ENST00000306149 CHRM2P08172 466 aa13.32□□□□□ -0.28
CSDC2-201ENST00000306149 ELP5Q8TE02 316 aa13.32□□□□□ -0.28
CSDC2-201ENST00000306149 CCDC74BQ96LY2 380 aa13.32□□□□□ -0.28
CSDC2-201ENST00000306149 GNRHR2Q96P88 292 aa13.32□□□□□ -0.28
CSDC2-201ENST00000306149 MOB1AQ9H8S9 216 aa13.32□□□□□ -0.28
CSDC2-201ENST00000306149 A0A0B4J2A0 478 aa13.31□□□□□ -0.28
CSDC2-201ENST00000306149 OR5H15A6NDH6 313 aa13.31□□□□□ -0.28
CSDC2-201ENST00000306149 H0YIZ8 118 aa13.31□□□□□ -0.28
CSDC2-201ENST00000306149 GSTP1P09211 210 aaKnown RBP13.31□□□□□ -0.28
CSDC2-201ENST00000306149 PRSS12P56730 875 aa13.31□□□□□ -0.28
CSDC2-201ENST00000306149 CYCSP99999 105 aaKnown RBP13.31□□□□□ -0.28
CSDC2-201ENST00000306149 ACTBL2Q562R1 376 aa13.31□□□□□ -0.28
CSDC2-201ENST00000306149 SVBPQ8N300 66 aa13.31□□□□□ -0.28
CSDC2-201ENST00000306149 OR51T1Q8NGJ9 327 aa13.31□□□□□ -0.28
CSDC2-201ENST00000306149 LYZL4Q96KX0 146 aa13.31□□□□□ -0.28
CSDC2-201ENST00000306149 TSNAXQ99598 290 aaKnown RBP13.31□□□□□ -0.28
CSDC2-201ENST00000306149 RNF126Q9BV68 326 aa13.31□□□□□ -0.28
CSDC2-201ENST00000306149 HPF1Q9NWY4 346 aa13.31□□□□□ -0.28
CSDC2-201ENST00000306149 SHPKQ9UHJ6 478 aa13.31□□□□□ -0.28
CSDC2-201ENST00000306149 CEACAM18A8MTB9 384 aa13.31□□□□□ -0.28
CSDC2-201ENST00000306149 NUDT19A8MXV4 375 aa13.31□□□□□ -0.28
CSDC2-201ENST00000306149 TMEM128Q5BJH2 165 aa13.31□□□□□ -0.28
CSDC2-201ENST00000306149 VAX1Q5SQQ9 334 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 113.8 ms