RNA–Protein interactions for RNA: ENST00000302085.8

SMAD1-201, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD1, Length 1,966 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-201ENST00000302085 C1QL2Q7Z5L3 287 aa19.33■□□□□ 0.69
SMAD1-201ENST00000302085 ZNF584Q8IVC4 421 aa19.33■□□□□ 0.69
SMAD1-201ENST00000302085 TMEM104Q8NE00 496 aa19.33■□□□□ 0.69
SMAD1-201ENST00000302085 GPX8Q8TED1 209 aa19.33■□□□□ 0.69
SMAD1-201ENST00000302085 AKAP1Q92667 903 aaKnown RBP eCLIP19.33■□□□□ 0.69
SMAD1-201ENST00000302085 PIGTQ969N2 578 aa19.33■□□□□ 0.69
SMAD1-201ENST00000302085 SEH1LQ96EE3 360 aa19.33■□□□□ 0.69
SMAD1-201ENST00000302085 POM121L2Q96KW2 1035 aa19.33■□□□□ 0.69
SMAD1-201ENST00000302085 ELF5Q9UKW6 265 aaPredicted RBP19.33■□□□□ 0.69
SMAD1-201ENST00000302085 DOCK7Q96N67 2140 aa19.33■□□□□ 0.69
SMAD1-201ENST00000302085 HMX3A6NHT5 357 aa19.33■□□□□ 0.68
SMAD1-201ENST00000302085 XRCC2O43543 280 aa19.33■□□□□ 0.68
SMAD1-201ENST00000302085 EIF2S3P41091 472 aaKnown RBP19.33■□□□□ 0.68
SMAD1-201ENST00000302085 PTGFRP43088 359 aa19.33■□□□□ 0.68
SMAD1-201ENST00000302085 KIR2DL2P43627 348 aaPredicted RBP19.33■□□□□ 0.68
SMAD1-201ENST00000302085 SFRP4Q6FHJ7 346 aaPredicted RBP19.33■□□□□ 0.68
SMAD1-201ENST00000302085 CMBLQ96DG6 245 aa19.33■□□□□ 0.68
SMAD1-201ENST00000302085 ZMAT3Q9HA38 289 aaKnown RBP19.33■□□□□ 0.68
SMAD1-201ENST00000302085 NUBP2Q9Y5Y2 271 aa19.33■□□□□ 0.68
SMAD1-201ENST00000302085 MEIS3P1A6NDR6 274 aa19.32■□□□□ 0.68
SMAD1-201ENST00000302085 HLA-DMAP28067 261 aa19.32■□□□□ 0.68
SMAD1-201ENST00000302085 OLFML2AQ68BL7 652 aa19.32■□□□□ 0.68
SMAD1-201ENST00000302085 TMEM42Q69YG0 159 aa19.32■□□□□ 0.68
SMAD1-201ENST00000302085 RAB12Q6IQ22 244 aa19.32■□□□□ 0.68
SMAD1-201ENST00000302085 RPUSD3Q6P087 351 aaKnown RBP19.32■□□□□ 0.68
SMAD1-201ENST00000302085 DPPA2Q7Z7J5 298 aa19.32■□□□□ 0.68
SMAD1-201ENST00000302085 OR5D18Q8NGL1 313 aa19.32■□□□□ 0.68
SMAD1-201ENST00000302085 UBASH3BQ8TF42 649 aa19.32■□□□□ 0.68
SMAD1-201ENST00000302085 OR14I1A6ND48 311 aa19.32■□□□□ 0.68
SMAD1-201ENST00000302085 NAP1L6A6NFF2 107 aa19.32■□□□□ 0.68
SMAD1-201ENST00000302085 NAT2P11245 290 aa19.32■□□□□ 0.68
SMAD1-201ENST00000302085 IGHV1-2P23083 117 aa19.32■□□□□ 0.68
SMAD1-201ENST00000302085 OR8B8Q15620 311 aa19.32■□□□□ 0.68
SMAD1-201ENST00000302085 TBRG1Q3YBR2 411 aa19.32■□□□□ 0.68
SMAD1-201ENST00000302085 ZNF260Q3ZCT1 412 aa19.32■□□□□ 0.68
SMAD1-201ENST00000302085 ZNF585AQ6P3V2 769 aa19.32■□□□□ 0.68
SMAD1-201ENST00000302085 DRAXINQ8NBI3 349 aaPredicted RBP19.32■□□□□ 0.68
SMAD1-201ENST00000302085 KCNG3Q8TAE7 436 aa19.32■□□□□ 0.68
SMAD1-201ENST00000302085 LPAR5Q9H1C0 372 aa19.32■□□□□ 0.68
SMAD1-201ENST00000302085 NUDT15Q9NV35 164 aa19.32■□□□□ 0.68
SMAD1-201ENST00000302085 COPZ2Q9P299 210 aa19.32■□□□□ 0.68
SMAD1-201ENST00000302085 DKK4Q9UBT3 224 aa19.32■□□□□ 0.68
SMAD1-201ENST00000302085 ING4Q9UNL4 249 aa19.32■□□□□ 0.68
SMAD1-201ENST00000302085 MSRB2Q9Y3D2 182 aa19.32■□□□□ 0.68
SMAD1-201ENST00000302085 TRAV6A0A075B6T7 132 aa19.31■□□□□ 0.68
SMAD1-201ENST00000302085 A0A1W2PP11 408 aa19.31■□□□□ 0.68
SMAD1-201ENST00000302085 MKRN2OSH3BPM6 223 aa19.31■□□□□ 0.68
SMAD1-201ENST00000302085 SULT1C2O00338 296 aa19.31■□□□□ 0.68
SMAD1-201ENST00000302085 CDC14BO60729 498 aa19.31■□□□□ 0.68
SMAD1-201ENST00000302085 ALDH3B1P43353 468 aa19.31■□□□□ 0.68
SMAD1-201ENST00000302085 PLP2Q04941 152 aa19.31■□□□□ 0.68
SMAD1-201ENST00000302085 GSG1Q2KHT4 349 aa19.31■□□□□ 0.68
SMAD1-201ENST00000302085 PCGF3Q3KNV8 242 aa19.31■□□□□ 0.68
SMAD1-201ENST00000302085 MYO7BQ6PIF6 2116 aa19.31■□□□□ 0.68
SMAD1-201ENST00000302085 CNEP1R1Q8N9A8 125 aa19.31■□□□□ 0.68
SMAD1-201ENST00000302085 PNLDC1Q8NA58 520 aaKnown RBP19.31■□□□□ 0.68
SMAD1-201ENST00000302085 AQP3Q92482 292 aa19.31■□□□□ 0.68
SMAD1-201ENST00000302085 NICN1Q9BSH3 213 aa19.31■□□□□ 0.68
SMAD1-201ENST00000302085 BANF2Q9H503 90 aa19.31■□□□□ 0.68
SMAD1-201ENST00000302085 LUZP4Q9P127 313 aa19.31■□□□□ 0.68
SMAD1-201ENST00000302085 A0A0A6YYD4 124 aa19.3■□□□□ 0.68
SMAD1-201ENST00000302085 CCNKO75909 580 aa19.3■□□□□ 0.68
SMAD1-201ENST00000302085 MPIG6BO95866 241 aa19.3■□□□□ 0.68
SMAD1-201ENST00000302085 UBBP0CG47 229 aa19.3■□□□□ 0.68
SMAD1-201ENST00000302085 VEGFCP49767 419 aa19.3■□□□□ 0.68
SMAD1-201ENST00000302085 CLVS2Q5SYC1 327 aa19.3■□□□□ 0.68
SMAD1-201ENST00000302085 FAAP20Q6NZ36 180 aa19.3■□□□□ 0.68
SMAD1-201ENST00000302085 BTN2A1Q7KYR7 527 aa19.3■□□□□ 0.68
SMAD1-201ENST00000302085 ZNF75AQ96N20 296 aa19.3■□□□□ 0.68
SMAD1-201ENST00000302085 SCPEP1Q9HB40 452 aa19.3■□□□□ 0.68
SMAD1-201ENST00000302085 APC2O95996 2303 aa19.3■□□□□ 0.68
SMAD1-201ENST00000302085 LPLP06858 475 aa19.3■□□□□ 0.68
SMAD1-201ENST00000302085 FOXF2Q12947 444 aa19.3■□□□□ 0.68
SMAD1-201ENST00000302085 CDNFQ49AH0 187 aa19.3■□□□□ 0.68
SMAD1-201ENST00000302085 NSUN5P2Q63ZY6 315 aa19.3■□□□□ 0.68
SMAD1-201ENST00000302085 VWA1Q6PCB0 445 aa19.3■□□□□ 0.68
SMAD1-201ENST00000302085 MDP1Q86V88 176 aa19.3■□□□□ 0.68
SMAD1-201ENST00000302085 CHST4Q8NCG5 386 aa19.3■□□□□ 0.68
SMAD1-201ENST00000302085 TNFAIP8L1Q8WVP5 186 aa19.3■□□□□ 0.68
SMAD1-201ENST00000302085 ABHD17AQ96GS6 310 aa19.3■□□□□ 0.68
SMAD1-201ENST00000302085 MS4A3Q96HJ5 214 aa19.3■□□□□ 0.68
SMAD1-201ENST00000302085 TAS2R8Q9NYW2 309 aa19.3■□□□□ 0.68
SMAD1-201ENST00000302085 TMEM235A6NFC5 223 aa19.29■□□□□ 0.68
SMAD1-201ENST00000302085 NRASP01111 189 aa19.29■□□□□ 0.68
SMAD1-201ENST00000302085 CSF1P09603 554 aa19.29■□□□□ 0.68
SMAD1-201ENST00000302085 TRAPPC2P0DI81 140 aa19.29■□□□□ 0.68
SMAD1-201ENST00000302085 TRAPPC2BP0DI82 140 aa19.29■□□□□ 0.68
SMAD1-201ENST00000302085 SDHBP21912 280 aa19.29■□□□□ 0.68
SMAD1-201ENST00000302085 SSBP1Q04837 148 aaKnown RBP19.29■□□□□ 0.68
SMAD1-201ENST00000302085 SLC22A6Q4U2R8 563 aa19.29■□□□□ 0.68
SMAD1-201ENST00000302085 OR10R2Q8NGX6 335 aa19.29■□□□□ 0.68
SMAD1-201ENST00000302085 OR6F1Q8NGZ6 308 aa19.29■□□□□ 0.68
SMAD1-201ENST00000302085 APOBEC3DQ96AK3 386 aaPredicted RBP19.29■□□□□ 0.68
SMAD1-201ENST00000302085 SPSB1Q96BD6 273 aa19.29■□□□□ 0.68
SMAD1-201ENST00000302085 REPIN1Q9BWE0 567 aaKnown RBP19.29■□□□□ 0.68
SMAD1-201ENST00000302085 GHRLQ9UBU3 117 aa19.29■□□□□ 0.68
SMAD1-201ENST00000302085 STARD10Q9Y365 291 aa19.29■□□□□ 0.68
SMAD1-201ENST00000302085 IGKV1-27A0A075B6S5 117 aa19.28■□□□□ 0.68
SMAD1-201ENST00000302085 CRTAPO75718 401 aaPredicted RBP19.28■□□□□ 0.68
SMAD1-201ENST00000302085 NGFP01138 241 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms