RNA–Protein interactions for RNA: ENST00000296581.10

LSM6-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 2,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-201ENST00000296581 C11orf54Q9H0W9 315 aaPredicted RBP13.55□□□□□ -0.24
LSM6-201ENST00000296581 V9GYS6 101 aa13.55□□□□□ -0.24
LSM6-201ENST00000296581 CACNA1GO43497 2377 aa13.55□□□□□ -0.24
LSM6-201ENST00000296581 CFAP47Q6ZTR5 3102 aa13.55□□□□□ -0.24
LSM6-201ENST00000296581 A0A096LPE4 126 aa13.55□□□□□ -0.24
LSM6-201ENST00000296581 A0A1W2PPZ6 126 aa13.55□□□□□ -0.24
LSM6-201ENST00000296581 A6NIN4 97 aa13.55□□□□□ -0.24
LSM6-201ENST00000296581 UBL3O95164 117 aa13.55□□□□□ -0.24
LSM6-201ENST00000296581 IL18BPO95998 194 aa13.55□□□□□ -0.24
LSM6-201ENST00000296581 ADRB1P08588 477 aa13.55□□□□□ -0.24
LSM6-201ENST00000296581 BDKRB2P30411 391 aa13.55□□□□□ -0.24
LSM6-201ENST00000296581 GNALP38405 381 aa13.55□□□□□ -0.24
LSM6-201ENST00000296581 SNAI3Q3KNW1 292 aa13.55□□□□□ -0.24
LSM6-201ENST00000296581 PGAP1Q75T13 922 aa13.55□□□□□ -0.24
LSM6-201ENST00000296581 C9orf106Q8NAJ2 232 aa13.55□□□□□ -0.24
LSM6-201ENST00000296581 OR6M1Q8NGM8 313 aa13.55□□□□□ -0.24
LSM6-201ENST00000296581 OR1K1Q8NGR3 316 aa13.55□□□□□ -0.24
LSM6-201ENST00000296581 RAB40AQ8WXH6 277 aa13.55□□□□□ -0.24
LSM6-201ENST00000296581 FOXRED1Q96CU9 486 aaPredicted RBP13.55□□□□□ -0.24
LSM6-201ENST00000296581 HYLS1Q96M11 299 aa13.55□□□□□ -0.24
LSM6-201ENST00000296581 TMEM138Q9NPI0 162 aa13.55□□□□□ -0.24
LSM6-201ENST00000296581 TP53TG5Q9Y2B4 290 aa13.55□□□□□ -0.24
LSM6-201ENST00000296581 RHBDD3Q9Y3P4 386 aa13.55□□□□□ -0.24
LSM6-201ENST00000296581 DHRS3O75911 302 aa13.54□□□□□ -0.24
LSM6-201ENST00000296581 S100A6P06703 90 aa13.54□□□□□ -0.24
LSM6-201ENST00000296581 RRASP10301 218 aa13.54□□□□□ -0.24
LSM6-201ENST00000296581 COX5BP10606 129 aa13.54□□□□□ -0.24
LSM6-201ENST00000296581 ABOP16442 354 aa13.54□□□□□ -0.24
LSM6-201ENST00000296581 BTF3P20290 206 aaKnown RBP13.54□□□□□ -0.24
LSM6-201ENST00000296581 GRK1Q15835 563 aa13.54□□□□□ -0.24
LSM6-201ENST00000296581 TATDN3Q17R31 274 aa13.54□□□□□ -0.24
LSM6-201ENST00000296581 GFOD2Q3B7J2 385 aa13.54□□□□□ -0.24
LSM6-201ENST00000296581 NSUN5P2Q63ZY6 315 aa13.54□□□□□ -0.24
LSM6-201ENST00000296581 TFAP2EQ6VUC0 442 aa13.54□□□□□ -0.24
LSM6-201ENST00000296581 CPEB3Q8NE35 698 aaKnown RBP13.54□□□□□ -0.24
LSM6-201ENST00000296581 SGK3Q96BR1 496 aa13.54□□□□□ -0.24
LSM6-201ENST00000296581 ABHD1Q96SE0 405 aa13.54□□□□□ -0.24
LSM6-201ENST00000296581 C12orf57Q99622 126 aa13.54□□□□□ -0.24
LSM6-201ENST00000296581 SAV1Q9H4B6 383 aaPredicted RBP13.54□□□□□ -0.24
LSM6-201ENST00000296581 ALG5Q9Y673 324 aa13.54□□□□□ -0.24
LSM6-201ENST00000296581 CEP295Q9C0D2 2601 aa13.54□□□□□ -0.24
LSM6-201ENST00000296581 SULT1B1O43704 296 aa13.53□□□□□ -0.24
LSM6-201ENST00000296581 HLA-HP01893 362 aa13.53□□□□□ -0.24
LSM6-201ENST00000296581 RAB3AP20336 220 aa13.53□□□□□ -0.24
LSM6-201ENST00000296581 HTR2CP28335 458 aa13.53□□□□□ -0.24
LSM6-201ENST00000296581 KIR2DL3P43628 341 aa13.53□□□□□ -0.24
LSM6-201ENST00000296581 ART1P52961 327 aa13.53□□□□□ -0.24
LSM6-201ENST00000296581 MAB21L1Q13394 359 aa13.53□□□□□ -0.24
LSM6-201ENST00000296581 CLLU1Q5K131 121 aa13.53□□□□□ -0.24
LSM6-201ENST00000296581 OR2A2Q6IF42 318 aa13.53□□□□□ -0.24
LSM6-201ENST00000296581 ANKRD16Q6P6B7 361 aa13.53□□□□□ -0.24
LSM6-201ENST00000296581 DPPA2Q7Z7J5 298 aa13.53□□□□□ -0.24
LSM6-201ENST00000296581 OR51D1Q8NGF3 324 aa13.53□□□□□ -0.24
LSM6-201ENST00000296581 SYNPRQ8TBG9 265 aa13.53□□□□□ -0.24
LSM6-201ENST00000296581 BCL2L2Q92843 193 aaPredicted RBP13.53□□□□□ -0.24
LSM6-201ENST00000296581 RBPMSQ93062 196 aaKnown RBP13.53□□□□□ -0.24
LSM6-201ENST00000296581 FAM3DQ96BQ1 224 aa13.53□□□□□ -0.24
LSM6-201ENST00000296581 HAVCR1Q96D42 359 aa13.53□□□□□ -0.24
LSM6-201ENST00000296581 CGGBP1Q9UFW8 167 aaPredicted RBP13.53□□□□□ -0.24
LSM6-201ENST00000296581 ZNF503-AS2A6NEH8 195 aa13.53□□□□□ -0.24
LSM6-201ENST00000296581 ZP3P21754 424 aa13.53□□□□□ -0.24
LSM6-201ENST00000296581 ARR3P36575 388 aa13.53□□□□□ -0.24
LSM6-201ENST00000296581 UCNP55089 124 aa13.53□□□□□ -0.24
LSM6-201ENST00000296581 TMPRSS3P57727 454 aa13.53□□□□□ -0.24
LSM6-201ENST00000296581 GLYATL3Q5SZD4 288 aa13.53□□□□□ -0.24
LSM6-201ENST00000296581 GCNT2Q8N0V5 402 aa13.53□□□□□ -0.24
LSM6-201ENST00000296581 OR13C9Q8NGT0 318 aa13.53□□□□□ -0.24
LSM6-201ENST00000296581 EXTL1Q92935 676 aa13.53□□□□□ -0.24
LSM6-201ENST00000296581 C10orf35Q96D05 121 aa13.53□□□□□ -0.24
LSM6-201ENST00000296581 GTF3C1Q12789 2109 aa13.53□□□□□ -0.24
LSM6-201ENST00000296581 ANKRD11Q6UB99 2663 aaPredicted RBP13.52□□□□□ -0.24
LSM6-201ENST00000296581 LOC100289279A0A1B0GTE1 492 aa13.52□□□□□ -0.24
LSM6-201ENST00000296581 CNOT4O95628 575 aaKnown RBP13.52□□□□□ -0.24
LSM6-201ENST00000296581 ERCC1P07992 297 aaPredicted RBP13.52□□□□□ -0.24
LSM6-201ENST00000296581 THBS4P35443 961 aa13.52□□□□□ -0.24
LSM6-201ENST00000296581 KIR2DL2P43627 348 aaPredicted RBP13.52□□□□□ -0.24
LSM6-201ENST00000296581 POU3F4P49335 361 aa13.52□□□□□ -0.24
LSM6-201ENST00000296581 PITPNAQ00169 270 aa13.52□□□□□ -0.24
LSM6-201ENST00000296581 C2orf76Q3KRA6 126 aa13.52□□□□□ -0.24
LSM6-201ENST00000296581 TRIQKQ629K1 86 aa13.52□□□□□ -0.24
LSM6-201ENST00000296581 ZNF324BQ6AW86 544 aaPredicted RBP13.52□□□□□ -0.24
LSM6-201ENST00000296581 OR5AS1Q8N127 324 aa13.52□□□□□ -0.24
LSM6-201ENST00000296581 JAGN1Q8N5M9 183 aa13.52□□□□□ -0.24
LSM6-201ENST00000296581 S100A16Q96FQ6 103 aaKnown RBP13.52□□□□□ -0.24
LSM6-201ENST00000296581 PLEKHA1Q9HB21 404 aa13.52□□□□□ -0.24
LSM6-201ENST00000296581 NOX3Q9HBY0 568 aa13.52□□□□□ -0.24
LSM6-201ENST00000296581 PCDHB16Q9NRJ7 776 aa13.52□□□□□ -0.24
LSM6-201ENST00000296581 LUZP4Q9P127 313 aa13.52□□□□□ -0.24
LSM6-201ENST00000296581 ZNF391Q9UJN7 358 aa13.52□□□□□ -0.24
LSM6-201ENST00000296581 DHRS7CA6NNS2 312 aa13.52□□□□□ -0.25
LSM6-201ENST00000296581 CTDSPLO15194 276 aa13.52□□□□□ -0.25
LSM6-201ENST00000296581 LCATP04180 440 aa13.52□□□□□ -0.25
LSM6-201ENST00000296581 MNDAP41218 407 aa13.52□□□□□ -0.25
LSM6-201ENST00000296581 KRTCAP3Q53RY4 240 aa13.52□□□□□ -0.25
LSM6-201ENST00000296581 ZNF585AQ6P3V2 769 aa13.52□□□□□ -0.25
LSM6-201ENST00000296581 COLCA1Q6ZS62 124 aa13.52□□□□□ -0.25
LSM6-201ENST00000296581 CDH26Q8IXH8 852 aa13.52□□□□□ -0.25
LSM6-201ENST00000296581 OR52N4Q8NGI2 321 aa13.52□□□□□ -0.25
LSM6-201ENST00000296581 OR6K3Q8NGY3 331 aa13.52□□□□□ -0.25
LSM6-201ENST00000296581 SORCS2Q96PQ0 1159 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms