RNA–Protein interactions for RNA: ENST00000296051.6

HPS3-201, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS3, Length 4,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-201ENST00000296051 EGLN1Q9GZT9 426 aa12.06□□□□□ -0.48
HPS3-201ENST00000296051 C1orf123Q9NWV4 160 aa12.06□□□□□ -0.48
HPS3-201ENST00000296051 MMP24Q9Y5R2 645 aa12.06□□□□□ -0.48
HPS3-201ENST00000296051 CTAG2O75638 210 aa12.06□□□□□ -0.48
HPS3-201ENST00000296051 NXPH2O95156 264 aa12.06□□□□□ -0.48
HPS3-201ENST00000296051 CT62P0C5K7 136 aa12.06□□□□□ -0.48
HPS3-201ENST00000296051 APOBEC1P41238 236 aaKnown RBP12.06□□□□□ -0.48
HPS3-201ENST00000296051 ZNF136P52737 540 aa12.06□□□□□ -0.48
HPS3-201ENST00000296051 MESP2Q0VG99 397 aa12.06□□□□□ -0.48
HPS3-201ENST00000296051 IKZF1Q13422 519 aa12.06□□□□□ -0.48
HPS3-201ENST00000296051 KHDC1LQ5JSQ8 128 aa12.06□□□□□ -0.48
HPS3-201ENST00000296051 TMPRSS7Q7RTY8 843 aa12.06□□□□□ -0.48
HPS3-201ENST00000296051 GPBAR1Q8TDU6 330 aa12.06□□□□□ -0.48
HPS3-201ENST00000296051 SFT2D1Q8WV19 159 aa12.06□□□□□ -0.48
HPS3-201ENST00000296051 TRAV8-7A0A075B6U6 113 aa12.05□□□□□ -0.48
HPS3-201ENST00000296051 PMS2P1A4D2B8 440 aa12.05□□□□□ -0.48
HPS3-201ENST00000296051 SLC17A2O00624 439 aa12.05□□□□□ -0.48
HPS3-201ENST00000296051 PHF1O43189 567 aaPredicted RBP12.05□□□□□ -0.48
HPS3-201ENST00000296051 EFSO43281 561 aa12.05□□□□□ -0.48
HPS3-201ENST00000296051 ADAP1O75689 374 aa12.05□□□□□ -0.48
HPS3-201ENST00000296051 SERPINE2P07093 398 aa12.05□□□□□ -0.48
HPS3-201ENST00000296051 ZNF766Q5HY98 468 aa12.05□□□□□ -0.48
HPS3-201ENST00000296051 TMEM182Q6ZP80 229 aaPredicted RBP12.05□□□□□ -0.48
HPS3-201ENST00000296051 TRGV5A0A0B4J1U4 118 aa12.05□□□□□ -0.48
HPS3-201ENST00000296051 ZNF98A6NK75 572 aa12.05□□□□□ -0.48
HPS3-201ENST00000296051 MOSPD3O75425 235 aa12.05□□□□□ -0.48
HPS3-201ENST00000296051 FABP6P51161 128 aa12.05□□□□□ -0.48
HPS3-201ENST00000296051 ACER2Q5QJU3 275 aa12.05□□□□□ -0.48
HPS3-201ENST00000296051 SPICQ8N5J4 248 aa12.05□□□□□ -0.48
HPS3-201ENST00000296051 ROBO4Q8WZ75 1007 aa12.05□□□□□ -0.48
HPS3-201ENST00000296051 SPACA9Q96E40 222 aaPredicted RBP12.05□□□□□ -0.48
HPS3-201ENST00000296051 FBXO17Q96EF6 278 aa12.05□□□□□ -0.48
HPS3-201ENST00000296051 GNRHR2Q96P88 292 aa12.05□□□□□ -0.48
HPS3-201ENST00000296051 MOGAT1Q96PD6 335 aa12.05□□□□□ -0.48
HPS3-201ENST00000296051 NMNAT2Q9BZQ4 307 aa12.05□□□□□ -0.48
HPS3-201ENST00000296051 VN1R1Q9GZP7 353 aa12.05□□□□□ -0.48
HPS3-201ENST00000296051 SCPEP1Q9HB40 452 aa12.05□□□□□ -0.48
HPS3-201ENST00000296051 A0A087WZY1 265 aa12.05□□□□□ -0.48
HPS3-201ENST00000296051 SLC22A20A6NK97 555 aa12.05□□□□□ -0.48
HPS3-201ENST00000296051 NPIPB8E9PQR5 432 aa12.05□□□□□ -0.48
HPS3-201ENST00000296051 ENSAO43768 121 aaKnown RBP12.05□□□□□ -0.48
HPS3-201ENST00000296051 SCGB2A1O75556 95 aa12.05□□□□□ -0.48
HPS3-201ENST00000296051 LIMS1P48059 325 aa12.05□□□□□ -0.48
HPS3-201ENST00000296051 RAB13P51153 203 aa12.05□□□□□ -0.48
HPS3-201ENST00000296051 EDDM3AQ14507 147 aa12.05□□□□□ -0.48
HPS3-201ENST00000296051 TBC1D28Q2M2D7 210 aa12.05□□□□□ -0.48
HPS3-201ENST00000296051 CBLN3Q6UW01 205 aa12.05□□□□□ -0.48
HPS3-201ENST00000296051 LIPHQ8WWY8 451 aa12.05□□□□□ -0.48
HPS3-201ENST00000296051 TIMD4Q96H15 378 aa12.05□□□□□ -0.48
HPS3-201ENST00000296051 KCNJ15Q99712 375 aa12.05□□□□□ -0.48
HPS3-201ENST00000296051 NPAS1Q99742 590 aa12.05□□□□□ -0.48
HPS3-201ENST00000296051 TUBG2Q9NRH3 451 aa12.05□□□□□ -0.48
HPS3-201ENST00000296051 ZNF355PQ9NSJ1 428 aa12.05□□□□□ -0.48
HPS3-201ENST00000296051 OCIAD1Q9NX40 245 aa12.05□□□□□ -0.48
HPS3-201ENST00000296051 ASH2LQ9UBL3 628 aa12.05□□□□□ -0.48
HPS3-201ENST00000296051 VAMP5O95183 116 aa12.05□□□□□ -0.48
HPS3-201ENST00000296051 CD96P40200 585 aa12.05□□□□□ -0.48
HPS3-201ENST00000296051 EFNB2P52799 333 aa12.05□□□□□ -0.48
HPS3-201ENST00000296051 ERVK-16P61578 105 aa12.05□□□□□ -0.48
HPS3-201ENST00000296051 CLEC9AQ6UXN8 241 aa12.05□□□□□ -0.48
HPS3-201ENST00000296051 CMTM1Q8IZ96 169 aa12.05□□□□□ -0.48
HPS3-201ENST00000296051 APOBEC4Q8WW27 367 aaKnown RBP12.05□□□□□ -0.48
HPS3-201ENST00000296051 SDSLQ96GA7 329 aa12.05□□□□□ -0.48
HPS3-201ENST00000296051 HAO2Q9NYQ3 351 aa12.05□□□□□ -0.48
HPS3-201ENST00000296051 DSPPQ9NZW4 1301 aa12.05□□□□□ -0.48
HPS3-201ENST00000296051 M0R1B8 84 aa12.04□□□□□ -0.48
HPS3-201ENST00000296051 PPP1R2P9O14990 202 aa12.04□□□□□ -0.48
HPS3-201ENST00000296051 GALP22466 123 aa12.04□□□□□ -0.48
HPS3-201ENST00000296051 RPL12P30050 165 aaKnown RBP12.04□□□□□ -0.48
HPS3-201ENST00000296051 TAS2R46P59540 309 aa12.04□□□□□ -0.48
HPS3-201ENST00000296051 ZNF273Q14593 569 aa12.04□□□□□ -0.48
HPS3-201ENST00000296051 ACTBL2Q562R1 376 aa12.04□□□□□ -0.48
HPS3-201ENST00000296051 C16orf47Q6ZP98 133 aaPredicted RBP12.04□□□□□ -0.48
HPS3-201ENST00000296051 VN1R4Q7Z5H5 301 aa12.04□□□□□ -0.48
HPS3-201ENST00000296051 OR52N5Q8NH56 324 aa12.04□□□□□ -0.48
HPS3-201ENST00000296051 FAM122AQ96E09 287 aa12.04□□□□□ -0.48
HPS3-201ENST00000296051 ZFP92A6NM28 416 aa12.04□□□□□ -0.48
HPS3-201ENST00000296051 SEMA7AO75326 666 aa12.04□□□□□ -0.48
HPS3-201ENST00000296051 CBR3O75828 277 aa12.04□□□□□ -0.48
HPS3-201ENST00000296051 OR2C1O95371 312 aa12.04□□□□□ -0.48
HPS3-201ENST00000296051 NDUFB7P17568 137 aa12.04□□□□□ -0.48
HPS3-201ENST00000296051 FABP9Q0Z7S8 132 aa12.04□□□□□ -0.48
HPS3-201ENST00000296051 SP6Q3SY56 376 aa12.04□□□□□ -0.48
HPS3-201ENST00000296051 PLPP5Q8NEB5 264 aa12.04□□□□□ -0.48
HPS3-201ENST00000296051 MS4A3Q96HJ5 214 aa12.04□□□□□ -0.48
HPS3-201ENST00000296051 LHX9Q9NQ69 397 aa12.04□□□□□ -0.48
HPS3-201ENST00000296051 FLRT3Q9NZU0 649 aa12.04□□□□□ -0.48
HPS3-201ENST00000296051 PTAFRP25105 342 aa12.04□□□□□ -0.48
HPS3-201ENST00000296051 ETFDHQ16134 617 aa12.04□□□□□ -0.48
HPS3-201ENST00000296051 RNLSQ5VYX0 342 aa12.04□□□□□ -0.48
HPS3-201ENST00000296051 OR2L13Q8N349 312 aa12.04□□□□□ -0.48
HPS3-201ENST00000296051 CCDC71LQ8N9Z2 235 aa12.04□□□□□ -0.48
HPS3-201ENST00000296051 SCCPDHQ8NBX0 429 aa12.04□□□□□ -0.48
HPS3-201ENST00000296051 CHST11Q9NPF2 352 aa12.04□□□□□ -0.48
HPS3-201ENST00000296051 TRAPPC2LQ9UL33 140 aa12.04□□□□□ -0.48
HPS3-201ENST00000296051 ZNF638Q14966 1978 aaKnown RBP12.04□□□□□ -0.48
HPS3-201ENST00000296051 LRRC30A6NM36 301 aa12.04□□□□□ -0.48
HPS3-201ENST00000296051 GSTP1P09211 210 aaKnown RBP12.04□□□□□ -0.48
HPS3-201ENST00000296051 FAM157BP0CG42 384 aa12.04□□□□□ -0.48
HPS3-201ENST00000296051 HES1Q14469 280 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms