RNA–Protein interactions for RNA: ENST00000295927.3

PTX3-201, Transcript of pentraxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTX3, Length 1,940 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTX3-201ENST00000295927 CXorf67Q86X51 503 aaPredicted RBP19.78■□□□□ 0.76
PTX3-201ENST00000295927 YIPF5Q969M3 257 aa19.78■□□□□ 0.76
PTX3-201ENST00000295927 ATG5Q9H1Y0 275 aa19.78■□□□□ 0.76
PTX3-201ENST00000295927 GPR173Q9NS66 373 aa19.78■□□□□ 0.76
PTX3-201ENST00000295927 STARD10Q9Y365 291 aa19.78■□□□□ 0.76
PTX3-201ENST00000295927 PRRG2O14669 202 aa19.77■□□□□ 0.76
PTX3-201ENST00000295927 GSTZ1O43708 216 aaPredicted RBP19.77■□□□□ 0.76
PTX3-201ENST00000295927 NGFP01138 241 aa19.77■□□□□ 0.76
PTX3-201ENST00000295927 CEACAM8P31997 349 aaPredicted RBP19.77■□□□□ 0.76
PTX3-201ENST00000295927 MNDAP41218 407 aa19.77■□□□□ 0.76
PTX3-201ENST00000295927 OR3A4PP47883 348 aa19.77■□□□□ 0.76
PTX3-201ENST00000295927 RFX2P48378 723 aa19.77■□□□□ 0.76
PTX3-201ENST00000295927 ZNF57Q68EA5 555 aaPredicted RBP19.77■□□□□ 0.76
PTX3-201ENST00000295927 AWAT2Q6E213 333 aa19.77■□□□□ 0.76
PTX3-201ENST00000295927 NRARPQ7Z6K4 114 aa19.77■□□□□ 0.76
PTX3-201ENST00000295927 ZGRF1Q86YA3 2104 aa19.77■□□□□ 0.76
PTX3-201ENST00000295927 DOLPP1Q86YN1 238 aa19.77■□□□□ 0.76
PTX3-201ENST00000295927 GPER1Q99527 375 aa19.77■□□□□ 0.76
PTX3-201ENST00000295927 TP63Q9H3D4 680 aaPredicted RBP19.77■□□□□ 0.76
PTX3-201ENST00000295927 DIABLOQ9NR28 239 aa19.77■□□□□ 0.76
PTX3-201ENST00000295927 MAP1BP46821 2468 aaKnown RBP19.77■□□□□ 0.75
PTX3-201ENST00000295927 GMDSO60547 372 aa19.76■□□□□ 0.75
PTX3-201ENST00000295927 KDM4BO94953 1096 aa19.76■□□□□ 0.75
PTX3-201ENST00000295927 CD3GP09693 182 aa19.76■□□□□ 0.75
PTX3-201ENST00000295927 GLI4P10075 376 aa19.76■□□□□ 0.75
PTX3-201ENST00000295927 WNT5AP41221 380 aa19.76■□□□□ 0.75
PTX3-201ENST00000295927 QRFPP83859 136 aa19.76■□□□□ 0.75
PTX3-201ENST00000295927 GK2Q14410 553 aaPredicted RBP19.76■□□□□ 0.75
PTX3-201ENST00000295927 KISS1Q15726 138 aa19.76■□□□□ 0.75
PTX3-201ENST00000295927 CRIP3Q6Q6R5 217 aa19.76■□□□□ 0.75
PTX3-201ENST00000295927 BEND4Q6ZU67 534 aa19.76■□□□□ 0.75
PTX3-201ENST00000295927 MYPOPQ86VE0 399 aaPredicted RBP19.76■□□□□ 0.75
PTX3-201ENST00000295927 SMIM4Q8WVI0 70 aa19.76■□□□□ 0.75
PTX3-201ENST00000295927 ZCCHC14Q8WYQ9 949 aaKnown RBP19.76■□□□□ 0.75
PTX3-201ENST00000295927 GCDHQ92947 438 aaPredicted RBP19.76■□□□□ 0.75
PTX3-201ENST00000295927 PTX4Q96A99 478 aa19.76■□□□□ 0.75
PTX3-201ENST00000295927 REPIN1Q9BWE0 567 aaKnown RBP19.76■□□□□ 0.75
PTX3-201ENST00000295927 MRPS28Q9Y2Q9 187 aaKnown RBP19.76■□□□□ 0.75
PTX3-201ENST00000295927 NCOR2Q9Y618 2525 aa19.76■□□□□ 0.75
PTX3-201ENST00000295927 GGT3PA6NGU5 568 aa19.76■□□□□ 0.75
PTX3-201ENST00000295927 CELA3BP08861 270 aa19.76■□□□□ 0.75
PTX3-201ENST00000295927 MALLQ13021 153 aa19.76■□□□□ 0.75
PTX3-201ENST00000295927 P2RY6Q15077 328 aa19.76■□□□□ 0.75
PTX3-201ENST00000295927 CLVS2Q5SYC1 327 aa19.76■□□□□ 0.75
PTX3-201ENST00000295927 TMEM42Q69YG0 159 aa19.76■□□□□ 0.75
PTX3-201ENST00000295927 MTFR2Q6P444 385 aa19.76■□□□□ 0.75
PTX3-201ENST00000295927 CCBE1Q6UXH8 406 aaPredicted RBP19.76■□□□□ 0.75
PTX3-201ENST00000295927 ZNF101Q8IZC7 436 aa19.76■□□□□ 0.75
PTX3-201ENST00000295927 WDR31Q8NA23 367 aa19.76■□□□□ 0.75
PTX3-201ENST00000295927 PIGTQ969N2 578 aa19.76■□□□□ 0.75
PTX3-201ENST00000295927 AUNIPQ9H7T9 357 aa19.76■□□□□ 0.75
PTX3-201ENST00000295927 TPPPO94811 219 aa19.75■□□□□ 0.75
PTX3-201ENST00000295927 VSIG8P0DPA2 414 aa19.75■□□□□ 0.75
PTX3-201ENST00000295927 RAB6AP20340 208 aa19.75■□□□□ 0.75
PTX3-201ENST00000295927 HOXC12P31275 282 aa19.75■□□□□ 0.75
PTX3-201ENST00000295927 IDH3GP51553 393 aaPredicted RBP19.75■□□□□ 0.75
PTX3-201ENST00000295927 UNC119Q13432 240 aa19.75■□□□□ 0.75
PTX3-201ENST00000295927 TBC1D28Q2M2D7 210 aa19.75■□□□□ 0.75
PTX3-201ENST00000295927 GLIPR1L1Q6UWM5 242 aa19.75■□□□□ 0.75
PTX3-201ENST00000295927 PHF21AQ96BD5 680 aa19.75■□□□□ 0.75
PTX3-201ENST00000295927 GAL3ST1Q99999 423 aa19.75■□□□□ 0.75
PTX3-201ENST00000295927 SLC22A4Q9H015 551 aa19.75■□□□□ 0.75
PTX3-201ENST00000295927 PTTG3PQ9NZH4 202 aa19.75■□□□□ 0.75
PTX3-201ENST00000295927 RAB22AQ9UL26 194 aa19.75■□□□□ 0.75
PTX3-201ENST00000295927 PTHLHP12272 177 aa19.74■□□□□ 0.75
PTX3-201ENST00000295927 PMPCAQ10713 525 aa19.74■□□□□ 0.75
PTX3-201ENST00000295927 HACD4Q5VWC8 232 aa19.74■□□□□ 0.75
PTX3-201ENST00000295927 C15orf40Q8WUR7 153 aa19.74■□□□□ 0.75
PTX3-201ENST00000295927 SFXN3Q9BWM7 321 aa19.74■□□□□ 0.75
PTX3-201ENST00000295927 POFUT1Q9H488 388 aa19.74■□□□□ 0.75
PTX3-201ENST00000295927 ZNF835Q9Y2P0 537 aa19.74■□□□□ 0.75
PTX3-201ENST00000295927 ZNF816-ZNF321PA0A0X1KG74 233 aa19.74■□□□□ 0.75
PTX3-201ENST00000295927 GABARAPH6UMI1 98 aa19.74■□□□□ 0.75
PTX3-201ENST00000295927 NRASP01111 189 aa19.74■□□□□ 0.75
PTX3-201ENST00000295927 HLXQ14774 488 aaPredicted RBP19.74■□□□□ 0.75
PTX3-201ENST00000295927 MRPL21Q7Z2W9 205 aaKnown RBP19.74■□□□□ 0.75
PTX3-201ENST00000295927 PNLDC1Q8NA58 520 aaKnown RBP19.74■□□□□ 0.75
PTX3-201ENST00000295927 OR52I2Q8NH67 350 aa19.74■□□□□ 0.75
PTX3-201ENST00000295927 SPSB1Q96BD6 273 aa19.74■□□□□ 0.75
PTX3-201ENST00000295927 C1orf147Q96MC9 270 aaPredicted RBP19.74■□□□□ 0.75
PTX3-201ENST00000295927 NEDD4LQ96PU5 975 aa19.74■□□□□ 0.75
PTX3-201ENST00000295927 TRAV18A0A075B6X5 111 aa19.73■□□□□ 0.75
PTX3-201ENST00000295927 LYRM1O43325 122 aa19.73■□□□□ 0.75
PTX3-201ENST00000295927 CBR1P16152 277 aa19.73■□□□□ 0.75
PTX3-201ENST00000295927 RANBP1P43487 201 aa19.73■□□□□ 0.75
PTX3-201ENST00000295927 CNN3Q15417 329 aaKnown RBP19.73■□□□□ 0.75
PTX3-201ENST00000295927 ZBTB37Q5TC79 503 aa19.73■□□□□ 0.75
PTX3-201ENST00000295927 ZNF474Q6S9Z5 364 aaPredicted RBP19.73■□□□□ 0.75
PTX3-201ENST00000295927 BHLHA15Q7RTS1 189 aaPredicted RBP19.73■□□□□ 0.75
PTX3-201ENST00000295927 C17orf78Q8N4C9 275 aa19.73■□□□□ 0.75
PTX3-201ENST00000295927 OR5D18Q8NGL1 313 aa19.73■□□□□ 0.75
PTX3-201ENST00000295927 UBASH3BQ8TF42 649 aa19.73■□□□□ 0.75
PTX3-201ENST00000295927 FAM46BQ96A09 425 aa19.73■□□□□ 0.75
PTX3-201ENST00000295927 TBCCD1Q9NVR7 557 aa19.73■□□□□ 0.75
PTX3-201ENST00000295927 FBLN5Q9UBX5 448 aa19.73■□□□□ 0.75
PTX3-201ENST00000295927 TINAGQ9UJW2 476 aa19.73■□□□□ 0.75
PTX3-201ENST00000295927 TLN1Q9Y490 2541 aaKnown RBP19.73■□□□□ 0.75
PTX3-201ENST00000295927 TMEM14DPA8MWL7 114 aa19.72■□□□□ 0.75
PTX3-201ENST00000295927 AGFG2O95081 481 aa19.72■□□□□ 0.75
PTX3-201ENST00000295927 PTGFRP43088 359 aa19.72■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms