RNA–Protein interactions for RNA: ENST00000292779.3

CCDC116-201, Transcript of coiled-coil domain containing 116, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC116, Length 2,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116-201ENST00000292779 RAD51DO75771 328 aa13.25□□□□□ -0.29
CCDC116-201ENST00000292779 SLC25A4P12235 298 aa13.25□□□□□ -0.29
CCDC116-201ENST00000292779 MSR1P21757 451 aa13.25□□□□□ -0.29
CCDC116-201ENST00000292779 GUCA1AP43080 201 aaPredicted RBP13.25□□□□□ -0.29
CCDC116-201ENST00000292779 LSM6P62312 80 aaKnown RBP13.25□□□□□ -0.29
CCDC116-201ENST00000292779 RAET1LQ5VY80 246 aa13.25□□□□□ -0.29
CCDC116-201ENST00000292779 FAHD2BQ6P2I3 314 aaPredicted RBP13.25□□□□□ -0.29
CCDC116-201ENST00000292779 KCTD9Q7L273 389 aa13.25□□□□□ -0.29
CCDC116-201ENST00000292779 PDZD9Q8IXQ8 264 aa13.25□□□□□ -0.29
CCDC116-201ENST00000292779 KCNRGQ8N5I3 272 aa13.25□□□□□ -0.29
CCDC116-201ENST00000292779 SUMF1Q8NBK3 374 aa13.25□□□□□ -0.29
CCDC116-201ENST00000292779 SSC4DQ8WTU2 575 aa13.25□□□□□ -0.29
CCDC116-201ENST00000292779 ST8SIA2Q92186 375 aa13.25□□□□□ -0.29
CCDC116-201ENST00000292779 FAHD2AQ96GK7 314 aa13.25□□□□□ -0.29
CCDC116-201ENST00000292779 JSRP1Q96MG2 331 aaPredicted RBP13.25□□□□□ -0.29
CCDC116-201ENST00000292779 UCN2Q96RP3 112 aa13.25□□□□□ -0.29
CCDC116-201ENST00000292779 ANGPTL4Q9BY76 406 aa13.25□□□□□ -0.29
CCDC116-201ENST00000292779 ZNF700Q9H0M5 742 aa13.25□□□□□ -0.29
CCDC116-201ENST00000292779 WDR13Q9H1Z4 485 aa13.25□□□□□ -0.29
CCDC116-201ENST00000292779 SESN1Q9Y6P5 492 aa13.25□□□□□ -0.29
CCDC116-201ENST00000292779 OR5H15A6NDH6 313 aa13.25□□□□□ -0.29
CCDC116-201ENST00000292779 F5H5K5 113 aa13.25□□□□□ -0.29
CCDC116-201ENST00000292779 LIFP15018 202 aa13.25□□□□□ -0.29
CCDC116-201ENST00000292779 ZFP36L1Q07352 338 aaKnown RBP13.25□□□□□ -0.29
CCDC116-201ENST00000292779 TCF15Q12870 199 aa13.25□□□□□ -0.29
CCDC116-201ENST00000292779 ENDOGQ14249 297 aaKnown RBP13.25□□□□□ -0.29
CCDC116-201ENST00000292779 ATXN7L3Q14CW9 347 aaPredicted RBP13.25□□□□□ -0.29
CCDC116-201ENST00000292779 JMJD6Q6NYC1 403 aaPredicted RBP13.25□□□□□ -0.29
CCDC116-201ENST00000292779 GLRX5Q86SX6 157 aa13.25□□□□□ -0.29
CCDC116-201ENST00000292779 HOGA1Q86XE5 327 aa13.25□□□□□ -0.29
CCDC116-201ENST00000292779 LRRC18Q8N456 261 aa13.25□□□□□ -0.29
CCDC116-201ENST00000292779 RELL2Q8NC24 303 aaPredicted RBP13.25□□□□□ -0.29
CCDC116-201ENST00000292779 TMEM54Q969K7 222 aa13.25□□□□□ -0.29
CCDC116-201ENST00000292779 ARHGAP5-AS1Q96IT6 56 aa13.25□□□□□ -0.29
CCDC116-201ENST00000292779 NELFAQ9H3P2 528 aa13.25□□□□□ -0.29
CCDC116-201ENST00000292779 ZNF160Q9HCG1 818 aa13.25□□□□□ -0.29
CCDC116-201ENST00000292779 CELSR3Q9NYQ7 3312 aa13.25□□□□□ -0.29
CCDC116-201ENST00000292779 ZIC3O60481 467 aa13.24□□□□□ -0.29
CCDC116-201ENST00000292779 UBBP0CG47 229 aa13.24□□□□□ -0.29
CCDC116-201ENST00000292779 NAT1P18440 290 aa13.24□□□□□ -0.29
CCDC116-201ENST00000292779 CTSSP25774 331 aa13.24□□□□□ -0.29
CCDC116-201ENST00000292779 NUP62P37198 522 aaPredicted RBP13.24□□□□□ -0.29
CCDC116-201ENST00000292779 SLC6A9P48067 706 aa13.24□□□□□ -0.29
CCDC116-201ENST00000292779 RPS27AP62979 156 aaKnown RBP13.24□□□□□ -0.29
CCDC116-201ENST00000292779 UBA52P62987 128 aaKnown RBP13.24□□□□□ -0.29
CCDC116-201ENST00000292779 EXT1Q16394 746 aa13.24□□□□□ -0.29
CCDC116-201ENST00000292779 BEX5Q5H9J7 111 aa13.24□□□□□ -0.29
CCDC116-201ENST00000292779 C10orf128Q5T292 105 aa13.24□□□□□ -0.29
CCDC116-201ENST00000292779 OR5D18Q8NGL1 313 aa13.24□□□□□ -0.29
CCDC116-201ENST00000292779 NPRL2Q8WTW4 380 aa13.24□□□□□ -0.29
CCDC116-201ENST00000292779 FBXW5Q969U6 566 aa13.24□□□□□ -0.29
CCDC116-201ENST00000292779 VRK1Q99986 396 aaPredicted RBP13.24□□□□□ -0.29
CCDC116-201ENST00000292779 FAM86C1Q9NVL1 165 aa13.24□□□□□ -0.29
CCDC116-201ENST00000292779 ANAPC10Q9UM13 185 aa13.24□□□□□ -0.29
CCDC116-201ENST00000292779 PCNX2A6NKB5 2137 aa13.24□□□□□ -0.29
CCDC116-201ENST00000292779 RNF222A6NCQ9 220 aa13.24□□□□□ -0.29
CCDC116-201ENST00000292779 A8MXK9 166 aa13.24□□□□□ -0.29
CCDC116-201ENST00000292779 C9J4A7 227 aa13.24□□□□□ -0.29
CCDC116-201ENST00000292779 NPIPA2E9PIF3 369 aa13.24□□□□□ -0.29
CCDC116-201ENST00000292779 NPIPA3F8WFD2 350 aa13.24□□□□□ -0.29
CCDC116-201ENST00000292779 LGALS8O00214 317 aa13.24□□□□□ -0.29
CCDC116-201ENST00000292779 OR2F2O95006 317 aa13.24□□□□□ -0.29
CCDC116-201ENST00000292779 DUS4LO95620 317 aaKnown RBP13.24□□□□□ -0.29
CCDC116-201ENST00000292779 CD63P08962 238 aa13.24□□□□□ -0.29
CCDC116-201ENST00000292779 NR2C1P13056 603 aa13.24□□□□□ -0.29
CCDC116-201ENST00000292779 SSR4P51571 173 aa13.24□□□□□ -0.29
CCDC116-201ENST00000292779 DSCR4P56555 118 aaPredicted RBP13.24□□□□□ -0.29
CCDC116-201ENST00000292779 OR2F1Q13607 317 aa13.24□□□□□ -0.29
CCDC116-201ENST00000292779 ZNF345Q14585 488 aa13.24□□□□□ -0.29
CCDC116-201ENST00000292779 TUSC1Q2TAM9 212 aa13.24□□□□□ -0.29
CCDC116-201ENST00000292779 CRIP3Q6Q6R5 217 aa13.24□□□□□ -0.29
CCDC116-201ENST00000292779 DTX1Q86Y01 620 aa13.24□□□□□ -0.29
CCDC116-201ENST00000292779 PRSS33Q8NF86 280 aa13.24□□□□□ -0.29
CCDC116-201ENST00000292779 GJC3Q8NFK1 279 aa13.24□□□□□ -0.29
CCDC116-201ENST00000292779 OR56B1Q8NGI3 324 aa13.24□□□□□ -0.29
CCDC116-201ENST00000292779 TERB2Q8NHR7 220 aa13.24□□□□□ -0.29
CCDC116-201ENST00000292779 NABP1Q96AH0 204 aa13.24□□□□□ -0.29
CCDC116-201ENST00000292779 KANTRA0A1W2PQU2 76 aa13.23□□□□□ -0.29
CCDC116-201ENST00000292779 MFNGO00587 321 aa13.23□□□□□ -0.29
CCDC116-201ENST00000292779 HPP00738 406 aa13.23□□□□□ -0.29
CCDC116-201ENST00000292779 IGLV3-1P01715 115 aa13.23□□□□□ -0.29
CCDC116-201ENST00000292779 FGF2P09038 288 aa13.23□□□□□ -0.29
CCDC116-201ENST00000292779 DLSTP36957 453 aa13.23□□□□□ -0.29
CCDC116-201ENST00000292779 SPEM2Q0P670 501 aa13.23□□□□□ -0.29
CCDC116-201ENST00000292779 ECH1Q13011 328 aa13.23□□□□□ -0.29
CCDC116-201ENST00000292779 KISS1Q15726 138 aa13.23□□□□□ -0.29
CCDC116-201ENST00000292779 C1QL2Q7Z5L3 287 aa13.23□□□□□ -0.29
CCDC116-201ENST00000292779 TMEM123Q8N131 208 aa13.23□□□□□ -0.29
CCDC116-201ENST00000292779 OR9K2Q8NGE7 335 aa13.23□□□□□ -0.29
CCDC116-201ENST00000292779 PAQR8Q8TEZ7 354 aa13.23□□□□□ -0.29
CCDC116-201ENST00000292779 URM1Q9BTM9 101 aaKnown RBP13.23□□□□□ -0.29
CCDC116-201ENST00000292779 RBM24Q9BX46 236 aaKnown RBP13.23□□□□□ -0.29
CCDC116-201ENST00000292779 DKKL1Q9UK85 242 aa13.23□□□□□ -0.29
CCDC116-201ENST00000292779 LOC105371267A0A1B0GV96 52 aa13.23□□□□□ -0.29
CCDC116-201ENST00000292779 EEF1E1-BLOC1S5C9J1V9 151 aa13.23□□□□□ -0.29
CCDC116-201ENST00000292779 EIF1BO60739 113 aaKnown RBP13.23□□□□□ -0.29
CCDC116-201ENST00000292779 TRA2AQ13595 282 aaKnown RBP eCLIP13.23□□□□□ -0.29
CCDC116-201ENST00000292779 PNLIPRP3Q17RR3 467 aa13.23□□□□□ -0.29
CCDC116-201ENST00000292779 RSPO1Q2MKA7 263 aaPredicted RBP13.23□□□□□ -0.29
CCDC116-201ENST00000292779 FAM74A1Q5RGS3 127 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms