RNA–Protein interactions for RNA: ENST00000291547.9

PKNOX1-201, Transcript of PBX/knotted 1 homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKNOX1, Length 5,003 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-201ENST00000291547 MRPL43Q8N983 215 aaKnown RBP9.72□□□□□ -0.85
PKNOX1-201ENST00000291547 CLEC18CQ8NCF0 446 aa9.72□□□□□ -0.85
PKNOX1-201ENST00000291547 OR5M1Q8NGP8 315 aa9.72□□□□□ -0.85
PKNOX1-201ENST00000291547 IFI44Q8TCB0 444 aa9.72□□□□□ -0.85
PKNOX1-201ENST00000291547 C11orf40Q8WZ69 217 aa9.72□□□□□ -0.85
PKNOX1-201ENST00000291547 ORAI1Q96D31 301 aa9.72□□□□□ -0.85
PKNOX1-201ENST00000291547 ZNF799Q96GE5 643 aa9.72□□□□□ -0.85
PKNOX1-201ENST00000291547 EPHX3Q9H6B9 360 aa9.72□□□□□ -0.85
PKNOX1-201ENST00000291547 HMX2A2RU54 273 aa9.72□□□□□ -0.85
PKNOX1-201ENST00000291547 POM121BA6NF01 834 aa9.72□□□□□ -0.85
PKNOX1-201ENST00000291547 RAB7AP51149 207 aa9.72□□□□□ -0.85
PKNOX1-201ENST00000291547 CNN1P51911 297 aaKnown RBP9.72□□□□□ -0.85
PKNOX1-201ENST00000291547 LIM2P55344 173 aa9.72□□□□□ -0.85
PKNOX1-201ENST00000291547 HIST1H3AP68431 136 aa9.72□□□□□ -0.85
PKNOX1-201ENST00000291547 TUSC1Q2TAM9 212 aa9.72□□□□□ -0.85
PKNOX1-201ENST00000291547 TSEN54Q7Z6J9 526 aaKnown RBP9.72□□□□□ -0.85
PKNOX1-201ENST00000291547 NUDT9Q9BW91 350 aa9.72□□□□□ -0.85
PKNOX1-201ENST00000291547 SLC25A37Q9NYZ2 338 aa9.72□□□□□ -0.85
PKNOX1-201ENST00000291547 PLEKHB1Q9UF11 243 aaPredicted RBP9.72□□□□□ -0.85
PKNOX1-201ENST00000291547 SLC17A4Q9Y2C5 497 aa9.72□□□□□ -0.85
PKNOX1-201ENST00000291547 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa9.72□□□□□ -0.85
PKNOX1-201ENST00000291547 TEX50A0A1B0GTY4 177 aa9.72□□□□□ -0.85
PKNOX1-201ENST00000291547 MASP2O00187 686 aa9.72□□□□□ -0.85
PKNOX1-201ENST00000291547 SH2D1BO14796 132 aa9.72□□□□□ -0.85
PKNOX1-201ENST00000291547 OR2J2O76002 312 aa9.72□□□□□ -0.85
PKNOX1-201ENST00000291547 AVPR2P30518 371 aa9.72□□□□□ -0.85
PKNOX1-201ENST00000291547 NOVA1P51513 510 aaKnown RBP9.72□□□□□ -0.85
PKNOX1-201ENST00000291547 MLF2Q15773 248 aaPredicted RBP9.72□□□□□ -0.85
PKNOX1-201ENST00000291547 CXorf58Q96LI9 332 aa9.72□□□□□ -0.85
PKNOX1-201ENST00000291547 DERL3Q96Q80 235 aa9.72□□□□□ -0.85
PKNOX1-201ENST00000291547 S1PR3Q99500 378 aa9.72□□□□□ -0.85
PKNOX1-201ENST00000291547 C19orf53Q9UNZ5 99 aaPredicted RBP9.72□□□□□ -0.85
PKNOX1-201ENST00000291547 OTOFQ9HC10 1997 aa9.71□□□□□ -0.85
PKNOX1-201ENST00000291547 H3BNC9 293 aa9.71□□□□□ -0.85
PKNOX1-201ENST00000291547 FZD6O60353 706 aa9.71□□□□□ -0.85
PKNOX1-201ENST00000291547 IGHEP01854 428 aa9.71□□□□□ -0.85
PKNOX1-201ENST00000291547 APOBEC1P41238 236 aaKnown RBP9.71□□□□□ -0.85
PKNOX1-201ENST00000291547 CSNK1EP49674 416 aaKnown RBP9.71□□□□□ -0.85
PKNOX1-201ENST00000291547 PAX5Q02548 391 aa9.71□□□□□ -0.85
PKNOX1-201ENST00000291547 TOMM34Q15785 309 aaPredicted RBP9.71□□□□□ -0.85
PKNOX1-201ENST00000291547 TMEM240Q5SV17 173 aa9.71□□□□□ -0.85
PKNOX1-201ENST00000291547 DCAF12Q5T6F0 453 aa9.71□□□□□ -0.85
PKNOX1-201ENST00000291547 GGNBP1Q5YKI7 109 aa9.71□□□□□ -0.85
PKNOX1-201ENST00000291547 TCTN3Q6NUS6 607 aa9.71□□□□□ -0.85
PKNOX1-201ENST00000291547 DHRS11Q6UWP2 260 aa9.71□□□□□ -0.85
PKNOX1-201ENST00000291547 DEFB108BQ8NET1 73 aa9.71□□□□□ -0.85
PKNOX1-201ENST00000291547 MS4A10Q96PG2 267 aa9.71□□□□□ -0.85
PKNOX1-201ENST00000291547 JAM3Q9BX67 310 aa9.71□□□□□ -0.85
PKNOX1-201ENST00000291547 DOCK3Q8IZD9 2030 aa9.71□□□□□ -0.85
PKNOX1-201ENST00000291547 TRPM7Q96QT4 1865 aa9.71□□□□□ -0.85
PKNOX1-201ENST00000291547 MFSD2BA6NFX1 497 aa9.71□□□□□ -0.85
PKNOX1-201ENST00000291547 WNT11O96014 354 aa9.71□□□□□ -0.85
PKNOX1-201ENST00000291547 IL5P05113 134 aa9.71□□□□□ -0.85
PKNOX1-201ENST00000291547 IGFBP6P24592 240 aaPredicted RBP9.71□□□□□ -0.85
PKNOX1-201ENST00000291547 MIDNQ504T8 468 aa9.71□□□□□ -0.85
PKNOX1-201ENST00000291547 PLA1AQ53H76 456 aa9.71□□□□□ -0.85
PKNOX1-201ENST00000291547 ZNF385BQ569K4 471 aa9.71□□□□□ -0.85
PKNOX1-201ENST00000291547 ZNF687Q8N1G0 1237 aa9.71□□□□□ -0.85
PKNOX1-201ENST00000291547 TCTEX1D1Q8N7M0 179 aa9.71□□□□□ -0.85
PKNOX1-201ENST00000291547 EGLN1Q9GZT9 426 aa9.71□□□□□ -0.85
PKNOX1-201ENST00000291547 CRISPLD2Q9H0B8 497 aa9.71□□□□□ -0.85
PKNOX1-201ENST00000291547 SIRT3Q9NTG7 399 aaPredicted RBP9.71□□□□□ -0.85
PKNOX1-201ENST00000291547 PYCARD-AS1I3L0S3 204 aa9.71□□□□□ -0.86
PKNOX1-201ENST00000291547 VAMP5O95183 116 aa9.71□□□□□ -0.86
PKNOX1-201ENST00000291547 NRASP01111 189 aa9.71□□□□□ -0.86
PKNOX1-201ENST00000291547 EMC4Q5J8M3 183 aa9.71□□□□□ -0.86
PKNOX1-201ENST00000291547 FAM27D1Q5T7N8 215 aa9.71□□□□□ -0.86
PKNOX1-201ENST00000291547 LAIR1Q6GTX8 287 aa9.71□□□□□ -0.86
PKNOX1-201ENST00000291547 C11orf87Q6NUJ2 197 aa9.71□□□□□ -0.86
PKNOX1-201ENST00000291547 ADAMTSL4Q6UY14 1074 aa9.71□□□□□ -0.86
PKNOX1-201ENST00000291547 GPR32P1Q8NGA4 272 aa9.71□□□□□ -0.86
PKNOX1-201ENST00000291547 SCMH1Q96GD3 660 aa9.71□□□□□ -0.86
PKNOX1-201ENST00000291547 RHNO1Q9BSD3 238 aa9.71□□□□□ -0.86
PKNOX1-201ENST00000291547 RCL1Q9Y2P8 373 aaKnown RBP9.71□□□□□ -0.86
PKNOX1-201ENST00000291547 WSB1Q9Y6I7 421 aa9.71□□□□□ -0.86
PKNOX1-201ENST00000291547 CLDN34H7C241 214 aa9.71□□□□□ -0.86
PKNOX1-201ENST00000291547 EPXP11678 715 aa9.71□□□□□ -0.86
PKNOX1-201ENST00000291547 RPL24P83731 157 aaKnown RBP9.71□□□□□ -0.86
PKNOX1-201ENST00000291547 RTL8BQ17RB0 113 aa9.71□□□□□ -0.86
PKNOX1-201ENST00000291547 KHDC1LQ5JSQ8 128 aa9.71□□□□□ -0.86
PKNOX1-201ENST00000291547 FAM24BQ8N5W8 94 aa9.71□□□□□ -0.86
PKNOX1-201ENST00000291547 ERGIC1Q969X5 290 aa9.71□□□□□ -0.86
PKNOX1-201ENST00000291547 C1QTNF6Q9BXI9 259 aa9.71□□□□□ -0.86
PKNOX1-201ENST00000291547 NAT8BQ9UHF3 227 aa9.71□□□□□ -0.86
PKNOX1-201ENST00000291547 IGHV3-20A0A0C4DH32 117 aa9.7□□□□□ -0.86
PKNOX1-201ENST00000291547 FCMRO60667 390 aa9.7□□□□□ -0.86
PKNOX1-201ENST00000291547 DHODHQ02127 395 aa9.7□□□□□ -0.86
PKNOX1-201ENST00000291547 NHLH1Q02575 133 aa9.7□□□□□ -0.86
PKNOX1-201ENST00000291547 NHLH2Q02577 135 aa9.7□□□□□ -0.86
PKNOX1-201ENST00000291547 SLC25A35Q3KQZ1 300 aa9.7□□□□□ -0.86
PKNOX1-201ENST00000291547 TIPARPQ7Z3E1 657 aaKnown RBP9.7□□□□□ -0.86
PKNOX1-201ENST00000291547 DAPP1Q9UN19 280 aa9.7□□□□□ -0.86
PKNOX1-201ENST00000291547 TIMM10BQ9Y5J6 103 aa9.7□□□□□ -0.86
PKNOX1-201ENST00000291547 NRG2O14511 850 aaPredicted RBP9.7□□□□□ -0.86
PKNOX1-201ENST00000291547 DSCR3O14972 297 aa9.7□□□□□ -0.86
PKNOX1-201ENST00000291547 EPHA2P29317 976 aa9.7□□□□□ -0.86
PKNOX1-201ENST00000291547 RPL18Q07020 188 aaKnown RBP9.7□□□□□ -0.86
PKNOX1-201ENST00000291547 CEBPEQ15744 281 aa9.7□□□□□ -0.86
PKNOX1-201ENST00000291547 RNASEKQ6P5S7 137 aaKnown RBP9.7□□□□□ -0.86
PKNOX1-201ENST00000291547 CAMKMTQ7Z624 323 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms