RNA–Protein interactions for RNA: ENST00000287766.8

SLC6A1-201, Transcript of solute carrier family 6 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A1, Length 4,502 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-201ENST00000287766 FZD2Q14332 565 aa11.28□□□□□ -0.6
SLC6A1-201ENST00000287766 B3GNTL1Q67FW5 361 aaPredicted RBP11.28□□□□□ -0.6
SLC6A1-201ENST00000287766 CTRB2Q6GPI1 263 aa11.28□□□□□ -0.6
SLC6A1-201ENST00000287766 HSD17B13Q7Z5P4 300 aaPredicted RBP11.28□□□□□ -0.6
SLC6A1-201ENST00000287766 MKXQ8IYA7 352 aa11.28□□□□□ -0.6
SLC6A1-201ENST00000287766 DND1Q8IYX4 353 aaKnown RBP11.28□□□□□ -0.6
SLC6A1-201ENST00000287766 PRSS35Q8N3Z0 413 aa11.28□□□□□ -0.6
SLC6A1-201ENST00000287766 OR11H7Q8NGC8 314 aa11.28□□□□□ -0.6
SLC6A1-201ENST00000287766 ADAT1Q9BUB4 502 aaKnown RBP11.28□□□□□ -0.6
SLC6A1-201ENST00000287766 RPH3ALQ9UNE2 315 aa11.28□□□□□ -0.6
SLC6A1-201ENST00000287766 ABCA1O95477 2261 aa11.28□□□□□ -0.6
SLC6A1-201ENST00000287766 PRSS37A4D1T9 235 aa11.28□□□□□ -0.6
SLC6A1-201ENST00000287766 RECKO95980 971 aa11.28□□□□□ -0.6
SLC6A1-201ENST00000287766 CSNK1A1P48729 337 aa11.28□□□□□ -0.6
SLC6A1-201ENST00000287766 WDR38Q5JTN6 314 aa11.28□□□□□ -0.6
SLC6A1-201ENST00000287766 BRICD5Q6PL45 260 aa11.28□□□□□ -0.6
SLC6A1-201ENST00000287766 UQCC3Q6UW78 93 aa11.28□□□□□ -0.6
SLC6A1-201ENST00000287766 SKA3Q8IX90 412 aa11.28□□□□□ -0.6
SLC6A1-201ENST00000287766 OR51E1Q8TCB6 317 aa11.28□□□□□ -0.6
SLC6A1-201ENST00000287766 STT3BQ8TCJ2 826 aa11.28□□□□□ -0.6
SLC6A1-201ENST00000287766 CTSFQ9UBX1 484 aa11.28□□□□□ -0.6
SLC6A1-201ENST00000287766 OR14J1Q9UGF5 321 aa11.28□□□□□ -0.6
SLC6A1-201ENST00000287766 B9D1Q9UPM9 204 aa11.28□□□□□ -0.6
SLC6A1-201ENST00000287766 TMEM218A2RU14 115 aa11.28□□□□□ -0.6
SLC6A1-201ENST00000287766 LINC00862A6NCI5 91 aa11.28□□□□□ -0.6
SLC6A1-201ENST00000287766 ANGPTL7O43827 346 aa11.28□□□□□ -0.6
SLC6A1-201ENST00000287766 TMIGD3P0DMS9 266 aaPredicted RBP11.28□□□□□ -0.6
SLC6A1-201ENST00000287766 SLC17A1Q14916 467 aa11.28□□□□□ -0.6
SLC6A1-201ENST00000287766 SLC25A30Q5SVS4 291 aa11.28□□□□□ -0.6
SLC6A1-201ENST00000287766 C1orf53Q5VUE5 145 aa11.28□□□□□ -0.6
SLC6A1-201ENST00000287766 TOMM20LQ6UXN7 152 aa11.28□□□□□ -0.6
SLC6A1-201ENST00000287766 GRINAQ7Z429 371 aa11.28□□□□□ -0.6
SLC6A1-201ENST00000287766 OR51A2Q8NGJ7 313 aa11.28□□□□□ -0.6
SLC6A1-201ENST00000287766 LHX4Q969G2 390 aa11.28□□□□□ -0.6
SLC6A1-201ENST00000287766 ABI3Q9P2A4 366 aa11.28□□□□□ -0.6
SLC6A1-201ENST00000287766 PTPRDP23468 1912 aa11.27□□□□□ -0.6
SLC6A1-201ENST00000287766 ZFAND5O76080 213 aa11.27□□□□□ -0.6
SLC6A1-201ENST00000287766 AQP8O94778 261 aa11.27□□□□□ -0.6
SLC6A1-201ENST00000287766 PTBP3O95758 552 aaKnown RBP11.27□□□□□ -0.6
SLC6A1-201ENST00000287766 OPRM1P35372 400 aa11.27□□□□□ -0.6
SLC6A1-201ENST00000287766 ERVK-16P61578 105 aa11.27□□□□□ -0.6
SLC6A1-201ENST00000287766 C17orf67Q0P5P2 114 aa11.27□□□□□ -0.6
SLC6A1-201ENST00000287766 MIDNQ504T8 468 aa11.27□□□□□ -0.6
SLC6A1-201ENST00000287766 GTF2H5Q6ZYL4 71 aa11.27□□□□□ -0.6
SLC6A1-201ENST00000287766 DAZAP1Q96EP5 407 aaKnown RBP11.27□□□□□ -0.6
SLC6A1-201ENST00000287766 MAGT1Q9H0U3 335 aa11.27□□□□□ -0.6
SLC6A1-201ENST00000287766 METTL9Q9H1A3 318 aa11.27□□□□□ -0.6
SLC6A1-201ENST00000287766 LDAHQ9H6V9 325 aa11.27□□□□□ -0.6
SLC6A1-201ENST00000287766 SF3B6Q9Y3B4 125 aaKnown RBP11.27□□□□□ -0.6
SLC6A1-201ENST00000287766 SNRNP200O75643 2136 aaKnown RBP11.27□□□□□ -0.6
SLC6A1-201ENST00000287766 A0A1W2PQF6 199 aa11.27□□□□□ -0.61
SLC6A1-201ENST00000287766 IGKV1D-16P01601 117 aa11.27□□□□□ -0.61
SLC6A1-201ENST00000287766 ERGP11308 486 aa11.27□□□□□ -0.61
SLC6A1-201ENST00000287766 GABRA1P14867 456 aa11.27□□□□□ -0.61
SLC6A1-201ENST00000287766 PAX6P26367 422 aa11.27□□□□□ -0.61
SLC6A1-201ENST00000287766 HOXA1P49639 335 aaPredicted RBP11.27□□□□□ -0.61
SLC6A1-201ENST00000287766 ATP1B3P54709 279 aa11.27□□□□□ -0.61
SLC6A1-201ENST00000287766 ZNF117Q03924 483 aa11.27□□□□□ -0.61
SLC6A1-201ENST00000287766 MRPL21Q7Z2W9 205 aaKnown RBP11.27□□□□□ -0.61
SLC6A1-201ENST00000287766 FAM71CQ8NEG0 241 aa11.27□□□□□ -0.61
SLC6A1-201ENST00000287766 OR51H1Q8NH63 302 aa11.27□□□□□ -0.61
SLC6A1-201ENST00000287766 CHRNA9Q9UGM1 479 aa11.27□□□□□ -0.61
SLC6A1-201ENST00000287766 ABCA7Q8IZY2 2146 aa11.27□□□□□ -0.61
SLC6A1-201ENST00000287766 LOC102724200A0A096LPH7 203 aaPredicted RBP11.27□□□□□ -0.61
SLC6A1-201ENST00000287766 LRP5LA4QPB2 252 aa11.27□□□□□ -0.61
SLC6A1-201ENST00000287766 C2CD4DB7Z1M9 353 aa11.27□□□□□ -0.61
SLC6A1-201ENST00000287766 AP4M1O00189 453 aa11.27□□□□□ -0.61
SLC6A1-201ENST00000287766 ZNF25P17030 456 aaPredicted RBP11.27□□□□□ -0.61
SLC6A1-201ENST00000287766 HNF1AP20823 631 aa11.27□□□□□ -0.61
SLC6A1-201ENST00000287766 CD27P26842 260 aa11.27□□□□□ -0.61
SLC6A1-201ENST00000287766 TRIM61Q5EBN2 209 aa11.27□□□□□ -0.61
SLC6A1-201ENST00000287766 MOB3CQ70IA8 216 aa11.27□□□□□ -0.61
SLC6A1-201ENST00000287766 H1FNTQ75WM6 255 aaPredicted RBP11.27□□□□□ -0.61
SLC6A1-201ENST00000287766 NAXDQ8IW45 347 aa11.27□□□□□ -0.61
SLC6A1-201ENST00000287766 SRPK3Q9UPE1 567 aa11.27□□□□□ -0.61
SLC6A1-201ENST00000287766 ZSWIM8A7E2V4 1837 aa11.27□□□□□ -0.61
SLC6A1-201ENST00000287766 DVL1O14640 695 aa11.27□□□□□ -0.61
SLC6A1-201ENST00000287766 NDUFB6O95139 128 aa11.27□□□□□ -0.61
SLC6A1-201ENST00000287766 ZIC2O95409 532 aaPredicted RBP11.27□□□□□ -0.61
SLC6A1-201ENST00000287766 F12P00748 615 aaPredicted RBP11.27□□□□□ -0.61
SLC6A1-201ENST00000287766 CHRM2P08172 466 aa11.27□□□□□ -0.61
SLC6A1-201ENST00000287766 AARDQ4LEZ3 155 aa11.27□□□□□ -0.61
SLC6A1-201ENST00000287766 PLCXD3Q63HM9 321 aa11.27□□□□□ -0.61
SLC6A1-201ENST00000287766 TMPRSS7Q7RTY8 843 aa11.27□□□□□ -0.61
SLC6A1-201ENST00000287766 SHISA5Q8N114 240 aa11.27□□□□□ -0.61
SLC6A1-201ENST00000287766 ZNF764Q96H86 408 aaPredicted RBP11.27□□□□□ -0.61
SLC6A1-201ENST00000287766 BCO1Q9HAY6 547 aa11.27□□□□□ -0.61
SLC6A1-201ENST00000287766 ZNF586Q9NXT0 402 aa11.27□□□□□ -0.61
SLC6A1-201ENST00000287766 MMACHCQ9Y4U1 282 aa11.27□□□□□ -0.61
SLC6A1-201ENST00000287766 A0A1B0GX78 115 aa11.26□□□□□ -0.61
SLC6A1-201ENST00000287766 THY1P04216 161 aa11.26□□□□□ -0.61
SLC6A1-201ENST00000287766 ENDOGQ14249 297 aaKnown RBP11.26□□□□□ -0.61
SLC6A1-201ENST00000287766 LYG2Q86SG7 212 aa11.26□□□□□ -0.61
SLC6A1-201ENST00000287766 WDR5BQ86VZ2 330 aa11.26□□□□□ -0.61
SLC6A1-201ENST00000287766 NPEPL1Q8NDH3 523 aa11.26□□□□□ -0.61
SLC6A1-201ENST00000287766 THOC3Q96J01 351 aaKnown RBP11.26□□□□□ -0.61
SLC6A1-201ENST00000287766 JAM3Q9BX67 310 aa11.26□□□□□ -0.61
SLC6A1-201ENST00000287766 NCOR1O75376 2440 aa11.26□□□□□ -0.61
SLC6A1-201ENST00000287766 G3V3Q6 166 aa11.26□□□□□ -0.61
SLC6A1-201ENST00000287766 IGF2P01344 180 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms