RNA–Protein interactions for RNA: ENST00000278386.10

CD44-203, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 1 (best) BASIC

Gene CD44, Length 484 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-203ENST00000278386 FGFRL1Q8N441 504 aa10.54□□□□□ -0.72
CD44-203ENST00000278386 FAM216BQ8N7L0 139 aa10.54□□□□□ -0.72
CD44-203ENST00000278386 OR1M1Q8NGA1 313 aa10.54□□□□□ -0.72
CD44-203ENST00000278386 DYRK2Q92630 601 aa10.54□□□□□ -0.72
CD44-203ENST00000278386 NMNAT2Q9BZQ4 307 aa10.54□□□□□ -0.72
CD44-203ENST00000278386 OR10A2Q9H208 303 aa10.54□□□□□ -0.72
CD44-203ENST00000278386 MED20Q9H944 212 aa10.54□□□□□ -0.72
CD44-203ENST00000278386 RNPEPL1Q9HAU8 725 aa10.54□□□□□ -0.72
CD44-203ENST00000278386 SIRT7Q9NRC8 400 aa10.54□□□□□ -0.72
CD44-203ENST00000278386 VNN3Q9NY84 501 aa10.54□□□□□ -0.72
CD44-203ENST00000278386 KAAG1Q9UBP8 84 aa10.54□□□□□ -0.72
CD44-203ENST00000278386 RPUSD1Q9UJJ7 312 aaKnown RBP10.54□□□□□ -0.72
CD44-203ENST00000278386 PRPF19Q9UMS4 504 aaKnown RBP10.54□□□□□ -0.72
CD44-203ENST00000278386 ARL2BPQ9Y2Y0 163 aa10.54□□□□□ -0.72
CD44-203ENST00000278386 FAM96BQ9Y3D0 163 aa10.54□□□□□ -0.72
CD44-203ENST00000278386 KPTNQ9Y664 436 aa10.54□□□□□ -0.72
CD44-203ENST00000278386 A0A1B0GVI7 797 aa10.53□□□□□ -0.72
CD44-203ENST00000278386 NKX6-3A6NJ46 265 aa10.53□□□□□ -0.72
CD44-203ENST00000278386 FAM183AA6NL82 134 aa10.53□□□□□ -0.72
CD44-203ENST00000278386 ANXA2P2A6NMY6 339 aa10.53□□□□□ -0.72
CD44-203ENST00000278386 H3BN98 237 aa10.53□□□□□ -0.72
CD44-203ENST00000278386 M0QZ24 198 aa10.53□□□□□ -0.72
CD44-203ENST00000278386 FCN3O75636 299 aa10.53□□□□□ -0.72
CD44-203ENST00000278386 LHBP01229 141 aa10.53□□□□□ -0.72
CD44-203ENST00000278386 H2BFMP0C1H6 154 aa10.53□□□□□ -0.72
CD44-203ENST00000278386 MUC1P15941 1255 aaPredicted RBP10.53□□□□□ -0.72
CD44-203ENST00000278386 CFL1P23528 166 aaKnown RBP10.53□□□□□ -0.72
CD44-203ENST00000278386 NAA10P41227 235 aaPredicted RBP10.53□□□□□ -0.72
CD44-203ENST00000278386 RPL15P61313 204 aaKnown RBP10.53□□□□□ -0.72
CD44-203ENST00000278386 GNGT1P63211 74 aa10.53□□□□□ -0.72
CD44-203ENST00000278386 ELF3P78545 371 aaPredicted RBP10.53□□□□□ -0.72
CD44-203ENST00000278386 MICAQ29983 383 aa10.53□□□□□ -0.72
CD44-203ENST00000278386 CDONQ4KMG0 1287 aa10.53□□□□□ -0.72
CD44-203ENST00000278386 OR2T5Q6IEZ7 315 aa10.53□□□□□ -0.72
CD44-203ENST00000278386 WDR82Q6UXN9 313 aa10.53□□□□□ -0.72
CD44-203ENST00000278386 KCTD8Q6ZWB6 473 aa10.53□□□□□ -0.72
CD44-203ENST00000278386 LDLRAD3Q86YD5 345 aa10.53□□□□□ -0.72
CD44-203ENST00000278386 CMTM4Q8IZR5 234 aa10.53□□□□□ -0.72
CD44-203ENST00000278386 FTMTQ8N4E7 242 aa10.53□□□□□ -0.72
CD44-203ENST00000278386 IQCF1Q8N6M8 205 aa10.53□□□□□ -0.72
CD44-203ENST00000278386 CSNK2A3Q8NEV1 391 aa10.53□□□□□ -0.72
CD44-203ENST00000278386 OR10G2Q8NGC3 310 aa10.53□□□□□ -0.72
CD44-203ENST00000278386 OR52H1Q8NGJ2 320 aa10.53□□□□□ -0.72
CD44-203ENST00000278386 OR2T29Q8NH02 315 aa10.53□□□□□ -0.72
CD44-203ENST00000278386 RNF133Q8WVZ7 376 aa10.53□□□□□ -0.72
CD44-203ENST00000278386 LRTOMTQ8WZ04 291 aa10.53□□□□□ -0.72
CD44-203ENST00000278386 UBE2FQ969M7 185 aa10.53□□□□□ -0.72
CD44-203ENST00000278386 MICU1Q9BPX6 476 aa10.53□□□□□ -0.72
CD44-203ENST00000278386 ABHD6Q9BV23 337 aa10.53□□□□□ -0.72
CD44-203ENST00000278386 RTL8AQ9BWD3 113 aa10.53□□□□□ -0.72
CD44-203ENST00000278386 DGCR6LQ9BY27 220 aa10.53□□□□□ -0.72
CD44-203ENST00000278386 MUC13Q9H3R2 512 aa10.53□□□□□ -0.72
CD44-203ENST00000278386 MAGIXQ9H6Y5 334 aa10.53□□□□□ -0.72
CD44-203ENST00000278386 CNTD2Q9H8S5 307 aa10.53□□□□□ -0.72
CD44-203ENST00000278386 CMC2Q9NRP2 79 aa10.53□□□□□ -0.72
CD44-203ENST00000278386 PDP1Q9P0J1 537 aaPredicted RBP10.53□□□□□ -0.72
CD44-203ENST00000278386 DNAJB11Q9UBS4 358 aa10.53□□□□□ -0.72
CD44-203ENST00000278386 RNF114Q9Y508 228 aa10.53□□□□□ -0.72
CD44-203ENST00000278386 TCRBV5S2A0A599 114 aa10.52□□□□□ -0.73
CD44-203ENST00000278386 BTBD17A6NE02 478 aa10.52□□□□□ -0.73
CD44-203ENST00000278386 ACOT8O14734 319 aa10.52□□□□□ -0.73
CD44-203ENST00000278386 CDIPTO14735 213 aa10.52□□□□□ -0.73
CD44-203ENST00000278386 TIMM23O14925 209 aa10.52□□□□□ -0.73
CD44-203ENST00000278386 NDUFB3O43676 98 aa10.52□□□□□ -0.73
CD44-203ENST00000278386 FBP1P09467 338 aa10.52□□□□□ -0.73
CD44-203ENST00000278386 PAICSP22234 425 aaKnown RBP10.52□□□□□ -0.73
CD44-203ENST00000278386 GSTT1P30711 240 aa10.52□□□□□ -0.73
CD44-203ENST00000278386 GSK3AP49840 483 aa10.52□□□□□ -0.73
CD44-203ENST00000278386 MNAT1P51948 309 aa10.52□□□□□ -0.73
CD44-203ENST00000278386 IL5RAQ01344 420 aa10.52□□□□□ -0.73
CD44-203ENST00000278386 SNCBQ16143 134 aa10.52□□□□□ -0.73
CD44-203ENST00000278386 C11orf91Q3C1V1 193 aa10.52□□□□□ -0.73
CD44-203ENST00000278386 FAM98BQ52LJ0 330 aaKnown RBP10.52□□□□□ -0.73
CD44-203ENST00000278386 LRRC10Q5BKY1 277 aa10.52□□□□□ -0.73
CD44-203ENST00000278386 LINC01590Q5TEZ4 76 aa10.52□□□□□ -0.73
CD44-203ENST00000278386 SHFQ7M4L6 423 aa10.52□□□□□ -0.73
CD44-203ENST00000278386 DHFR2Q86XF0 187 aa10.52□□□□□ -0.73
CD44-203ENST00000278386 HIST2H2ABQ8IUE6 130 aaPredicted RBP10.52□□□□□ -0.73
CD44-203ENST00000278386 C11orf53Q8IXP5 236 aa10.52□□□□□ -0.73
CD44-203ENST00000278386 H1FXQ92522 213 aaKnown RBP10.52□□□□□ -0.73
CD44-203ENST00000278386 SGK3Q96BR1 496 aa10.52□□□□□ -0.73
CD44-203ENST00000278386 SEH1LQ96EE3 360 aa10.52□□□□□ -0.73
CD44-203ENST00000278386 CITED1Q99966 193 aa10.52□□□□□ -0.73
CD44-203ENST00000278386 OR51V1Q9H2C8 321 aa10.52□□□□□ -0.73
CD44-203ENST00000278386 SEMA6AQ9H2E6 1030 aa10.52□□□□□ -0.73
CD44-203ENST00000278386 DPAGT1Q9H3H5 408 aa10.52□□□□□ -0.73
CD44-203ENST00000278386 PPP1R3EQ9H7J1 279 aa10.52□□□□□ -0.73
CD44-203ENST00000278386 CAB39Q9Y376 341 aaPredicted RBP10.52□□□□□ -0.73
CD44-203ENST00000278386 RHBDD3Q9Y3P4 386 aa10.52□□□□□ -0.73
CD44-203ENST00000278386 WNK1Q9H4A3 2382 aa10.52□□□□□ -0.73
CD44-203ENST00000278386 TET2Q6N021 2002 aaPredicted RBP10.51□□□□□ -0.73
CD44-203ENST00000278386 A0A1W2PRD5 423 aa10.51□□□□□ -0.73
CD44-203ENST00000278386 A0A1W2PRF3 423 aa10.51□□□□□ -0.73
CD44-203ENST00000278386 A0A1W2PRM7 423 aa10.51□□□□□ -0.73
CD44-203ENST00000278386 GLCEO94923 617 aa10.51□□□□□ -0.73
CD44-203ENST00000278386 LYNP07948 512 aa10.51□□□□□ -0.73
CD44-203ENST00000278386 SELLP14151 372 aa10.51□□□□□ -0.73
CD44-203ENST00000278386 EEF1B2P24534 225 aaKnown RBP10.51□□□□□ -0.73
CD44-203ENST00000278386 OPRL1P41146 370 aa10.51□□□□□ -0.73
CD44-203ENST00000278386 IER3P46695 156 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms